RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 NAA16Q6N069 864 aaPredicted RBP3.16□□□□□ -1.9
CNOT2-216ENST00000548939 TATDN1Q6P1N9 297 aa3.16□□□□□ -1.9
CNOT2-216ENST00000548939 SLC47A2Q86VL8 602 aa3.16□□□□□ -1.9
CNOT2-216ENST00000548939 FAM114A1Q8IWE2 563 aa3.16□□□□□ -1.9
CNOT2-216ENST00000548939 VN1R2Q8NFZ6 395 aa3.16□□□□□ -1.9
CNOT2-216ENST00000548939 ERLEC1Q96DZ1 483 aa3.16□□□□□ -1.9
CNOT2-216ENST00000548939 ZNF486Q96H40 463 aaPredicted RBP3.16□□□□□ -1.9
CNOT2-216ENST00000548939 NECTIN4Q96NY8 510 aa3.16□□□□□ -1.9
CNOT2-216ENST00000548939 NUP85Q9BW27 656 aa3.16□□□□□ -1.9
CNOT2-216ENST00000548939 RTN4RQ9BZR6 473 aa3.16□□□□□ -1.9
CNOT2-216ENST00000548939 VCPKMTQ9H867 229 aa3.16□□□□□ -1.9
CNOT2-216ENST00000548939 JMJD4Q9H9V9 463 aa3.16□□□□□ -1.9
CNOT2-216ENST00000548939 RAVER2Q9HCJ3 691 aaKnown RBP3.16□□□□□ -1.9
CNOT2-216ENST00000548939 UBN1Q9NPG3 1134 aa3.16□□□□□ -1.9
CNOT2-216ENST00000548939 FGF21Q9NSA1 209 aa3.16□□□□□ -1.9
CNOT2-216ENST00000548939 OR6C2Q9NZP2 312 aa3.16□□□□□ -1.9
CNOT2-216ENST00000548939 DUSP12Q9UNI6 340 aa3.16□□□□□ -1.9
CNOT2-216ENST00000548939 Q9Y3F1 56 aa3.16□□□□□ -1.9
CNOT2-216ENST00000548939 SIPA1L1O43166 1804 aa3.16□□□□□ -1.9
CNOT2-216ENST00000548939 ITPR3Q14573 2671 aa3.15□□□□□ -1.91
CNOT2-216ENST00000548939 FSD2A1L4K1 749 aa3.15□□□□□ -1.91
CNOT2-216ENST00000548939 ANKRD61A6NGH8 418 aa3.15□□□□□ -1.91
CNOT2-216ENST00000548939 ACOD1A6NK06 481 aa3.15□□□□□ -1.91
CNOT2-216ENST00000548939 LIPT2A6NK58 231 aa3.15□□□□□ -1.91
CNOT2-216ENST00000548939 J3QKU1 62 aa3.15□□□□□ -1.91
CNOT2-216ENST00000548939 PHOX2AO14813 284 aa3.15□□□□□ -1.91
CNOT2-216ENST00000548939 RETP07949 1114 aa3.15□□□□□ -1.91
CNOT2-216ENST00000548939 SLC6A6P31641 620 aa3.15□□□□□ -1.91
CNOT2-216ENST00000548939 MTHFRP42898 656 aa3.15□□□□□ -1.91
CNOT2-216ENST00000548939 TIMM10P62072 90 aa3.15□□□□□ -1.91
CNOT2-216ENST00000548939 DYNLL1P63167 89 aaKnown RBP3.15□□□□□ -1.91
CNOT2-216ENST00000548939 CALD1Q05682 793 aaKnown RBP3.15□□□□□ -1.91
CNOT2-216ENST00000548939 ZFP36L1Q07352 338 aaKnown RBP3.15□□□□□ -1.91
CNOT2-216ENST00000548939 SQLEQ14534 574 aa3.15□□□□□ -1.91
CNOT2-216ENST00000548939 NONOQ15233 471 aaKnown RBP eCLIP3.15□□□□□ -1.91
CNOT2-216ENST00000548939 TWISTNBQ3B726 338 aaPredicted RBP3.15□□□□□ -1.91
CNOT2-216ENST00000548939 ZNF528Q3MIS6 628 aa3.15□□□□□ -1.91
CNOT2-216ENST00000548939 RNF212Q495C1 297 aa3.15□□□□□ -1.91
CNOT2-216ENST00000548939 DUSP28Q4G0W2 176 aa3.15□□□□□ -1.91
CNOT2-216ENST00000548939 SARM1Q6SZW1 724 aa3.15□□□□□ -1.91
CNOT2-216ENST00000548939 CHST3Q7LGC8 479 aa3.15□□□□□ -1.91
CNOT2-216ENST00000548939 MARCH9Q86YJ5 346 aa3.15□□□□□ -1.91
CNOT2-216ENST00000548939 THNSL1Q8IYQ7 743 aa3.15□□□□□ -1.91
CNOT2-216ENST00000548939 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.15□□□□□ -1.91
CNOT2-216ENST00000548939 TRIML1Q8N9V2 468 aa3.15□□□□□ -1.91
CNOT2-216ENST00000548939 AQP11Q8NBQ7 271 aa3.15□□□□□ -1.91
CNOT2-216ENST00000548939 OR13J1Q8NGT2 312 aa3.15□□□□□ -1.91
CNOT2-216ENST00000548939 OR6S1Q8NH40 331 aa3.15□□□□□ -1.91
CNOT2-216ENST00000548939 MAPK15Q8TD08 544 aa3.15□□□□□ -1.91
CNOT2-216ENST00000548939 ATP8B4Q8TF62 1192 aa3.15□□□□□ -1.91
CNOT2-216ENST00000548939 SLC45A3Q96JT2 553 aa3.15□□□□□ -1.91
CNOT2-216ENST00000548939 AGAP4Q96P64 663 aa3.15□□□□□ -1.91
CNOT2-216ENST00000548939 CDCA3Q99618 268 aaPredicted RBP3.15□□□□□ -1.91
CNOT2-216ENST00000548939 SLF1Q9BQI6 1058 aa3.15□□□□□ -1.91
CNOT2-216ENST00000548939 CPVLQ9H3G5 476 aa3.15□□□□□ -1.91
CNOT2-216ENST00000548939 MED20Q9H944 212 aa3.15□□□□□ -1.91
CNOT2-216ENST00000548939 PPANQ9NQ55 473 aaKnown RBP3.15□□□□□ -1.91
CNOT2-216ENST00000548939 ZNF701Q9NV72 531 aaPredicted RBP3.15□□□□□ -1.91
CNOT2-216ENST00000548939 RHCGQ9UBD6 479 aa3.15□□□□□ -1.91
CNOT2-216ENST00000548939 CACNG4Q9UBN1 327 aa3.15□□□□□ -1.91
CNOT2-216ENST00000548939 PPP2R2CQ9Y2T4 447 aa3.15□□□□□ -1.91
CNOT2-216ENST00000548939 CFAP46Q8IYW2 2715 aa3.15□□□□□ -1.91
CNOT2-216ENST00000548939 PRRC2AP48634 2157 aaKnown RBP3.15□□□□□ -1.91
CNOT2-216ENST00000548939 KALRNO60229 2985 aa3.15□□□□□ -1.91
CNOT2-216ENST00000548939 FANCMQ8IYD8 2048 aa3.14□□□□□ -1.91
CNOT2-216ENST00000548939 SDK1Q7Z5N4 2213 aa3.14□□□□□ -1.91
CNOT2-216ENST00000548939 HYKKA2RU49 373 aa3.14□□□□□ -1.91
CNOT2-216ENST00000548939 SSX4O60224 188 aa3.14□□□□□ -1.91
CNOT2-216ENST00000548939 RSL1D1O76021 490 aaKnown RBP3.14□□□□□ -1.91
CNOT2-216ENST00000548939 ZNF853P0CG23 659 aa3.14□□□□□ -1.91
CNOT2-216ENST00000548939 GLULP15104 373 aa3.14□□□□□ -1.91
CNOT2-216ENST00000548939 HOXB8P17481 243 aaPredicted RBP3.14□□□□□ -1.91
CNOT2-216ENST00000548939 PIK3R1P27986 724 aa3.14□□□□□ -1.91
CNOT2-216ENST00000548939 SIM2Q14190 667 aaPredicted RBP3.14□□□□□ -1.91
CNOT2-216ENST00000548939 WDR43Q15061 677 aaKnown RBP eCLIP3.14□□□□□ -1.91
CNOT2-216ENST00000548939 SF3A2Q15428 464 aaKnown RBP3.14□□□□□ -1.91
CNOT2-216ENST00000548939 SLC25A53Q5H9E4 307 aa3.14□□□□□ -1.91
CNOT2-216ENST00000548939 DCLRE1AQ6PJP8 1040 aa3.14□□□□□ -1.91
CNOT2-216ENST00000548939 SLC25A47Q6Q0C1 308 aa3.14□□□□□ -1.91
CNOT2-216ENST00000548939 CLEC17AQ6ZS10 378 aa3.14□□□□□ -1.91
CNOT2-216ENST00000548939 TMEM179Q6ZVK1 233 aa3.14□□□□□ -1.91
CNOT2-216ENST00000548939 TMEM139Q8IV31 216 aa3.14□□□□□ -1.91
CNOT2-216ENST00000548939 MAML2Q8IZL2 1156 aaPredicted RBP3.14□□□□□ -1.91
CNOT2-216ENST00000548939 PDILTQ8N807 584 aa3.14□□□□□ -1.91
CNOT2-216ENST00000548939 LRRC15Q8TF66 581 aa3.14□□□□□ -1.91
CNOT2-216ENST00000548939 PHLDA1Q8WV24 401 aaPredicted RBP3.14□□□□□ -1.91
CNOT2-216ENST00000548939 POMGNT1Q8WZA1 660 aa3.14□□□□□ -1.91
CNOT2-216ENST00000548939 IRGQQ8WZA9 623 aa3.14□□□□□ -1.91
CNOT2-216ENST00000548939 CASP10Q92851 521 aa3.14□□□□□ -1.91
CNOT2-216ENST00000548939 P2RX5Q93086 422 aa3.14□□□□□ -1.91
CNOT2-216ENST00000548939 C16orf70Q9BSU1 422 aa3.14□□□□□ -1.91
CNOT2-216ENST00000548939 CLMPQ9H6B4 373 aa3.14□□□□□ -1.91
CNOT2-216ENST00000548939 GNB4Q9HAV0 340 aa3.14□□□□□ -1.91
CNOT2-216ENST00000548939 MAN2C1Q9NTJ4 1040 aa3.14□□□□□ -1.91
CNOT2-216ENST00000548939 NDE1Q9NXR1 346 aa3.14□□□□□ -1.91
CNOT2-216ENST00000548939 TAS2R14Q9NYV8 317 aa3.14□□□□□ -1.91
CNOT2-216ENST00000548939 HMG20BQ9P0W2 317 aa3.14□□□□□ -1.91
CNOT2-216ENST00000548939 CELA1Q9UNI1 258 aa3.14□□□□□ -1.91
CNOT2-216ENST00000548939 RALGAPA1Q6GYQ0 2036 aa3.14□□□□□ -1.91
CNOT2-216ENST00000548939 CELSR3Q9NYQ7 3312 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms