RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 SPOCK3Q9BQ16 436 aa11.21□□□□□ -0.61
TRAFD1-205ENST00000548277 VKORC1Q9BQB6 163 aa11.21□□□□□ -0.61
TRAFD1-205ENST00000548277 ENKD1Q9H0I2 346 aa11.21□□□□□ -0.61
TRAFD1-205ENST00000548277 C20orf96Q9NUD7 363 aaPredicted RBP11.21□□□□□ -0.61
TRAFD1-205ENST00000548277 PDE10AQ9Y233 779 aa11.21□□□□□ -0.61
TRAFD1-205ENST00000548277 VPS9D1Q9Y2B5 631 aa11.21□□□□□ -0.61
TRAFD1-205ENST00000548277 NINQ8N4C6 2090 aa11.21□□□□□ -0.62
TRAFD1-205ENST00000548277 ADGRG4Q8IZF6 3080 aa11.21□□□□□ -0.62
TRAFD1-205ENST00000548277 PRRC2AP48634 2157 aaKnown RBP11.2□□□□□ -0.62
TRAFD1-205ENST00000548277 TFECO14948 347 aaPredicted RBP11.2□□□□□ -0.62
TRAFD1-205ENST00000548277 NDUFS4O43181 175 aa11.2□□□□□ -0.62
TRAFD1-205ENST00000548277 NRDCO43847 1150 aa11.2□□□□□ -0.62
TRAFD1-205ENST00000548277 HS6ST1O60243 411 aa11.2□□□□□ -0.62
TRAFD1-205ENST00000548277 NME2P1O60361 137 aa11.2□□□□□ -0.62
TRAFD1-205ENST00000548277 NADKO95544 446 aaPredicted RBP11.2□□□□□ -0.62
TRAFD1-205ENST00000548277 KRT14P02533 472 aa11.2□□□□□ -0.62
TRAFD1-205ENST00000548277 FHP07954 510 aa11.2□□□□□ -0.62
TRAFD1-205ENST00000548277 SLC35G6P0C7Q6 338 aa11.2□□□□□ -0.62
TRAFD1-205ENST00000548277 ENO3P13929 434 aaPredicted RBP11.2□□□□□ -0.62
TRAFD1-205ENST00000548277 MAOAP21397 527 aa11.2□□□□□ -0.62
TRAFD1-205ENST00000548277 NME2P22392 152 aa11.2□□□□□ -0.62
TRAFD1-205ENST00000548277 PTGS2P35354 604 aa11.2□□□□□ -0.62
TRAFD1-205ENST00000548277 NR0B1P51843 470 aaKnown RBP11.2□□□□□ -0.62
TRAFD1-205ENST00000548277 PGGT1BP53609 377 aa11.2□□□□□ -0.62
TRAFD1-205ENST00000548277 GPR85P60893 370 aa11.2□□□□□ -0.62
TRAFD1-205ENST00000548277 TESK1Q15569 626 aa11.2□□□□□ -0.62
TRAFD1-205ENST00000548277 ZNF227Q86WZ6 799 aa11.2□□□□□ -0.62
TRAFD1-205ENST00000548277 PALM2Q8IXS6 379 aa11.2□□□□□ -0.62
TRAFD1-205ENST00000548277 MFSD9Q8NBP5 474 aa11.2□□□□□ -0.62
TRAFD1-205ENST00000548277 ZNF740Q8NDX6 193 aa11.2□□□□□ -0.62
TRAFD1-205ENST00000548277 NRGNQ92686 78 aa11.2□□□□□ -0.62
TRAFD1-205ENST00000548277 TMEM125Q96AQ2 219 aa11.2□□□□□ -0.62
TRAFD1-205ENST00000548277 TBC1D20Q96BZ9 403 aa11.2□□□□□ -0.62
TRAFD1-205ENST00000548277 MS4A14Q96JA4 679 aa11.2□□□□□ -0.62
TRAFD1-205ENST00000548277 DEFB126Q9BYW3 111 aa11.2□□□□□ -0.62
TRAFD1-205ENST00000548277 DEFB127Q9H1M4 99 aa11.2□□□□□ -0.62
TRAFD1-205ENST00000548277 IARS2Q9NSE4 1012 aaKnown RBP11.2□□□□□ -0.62
TRAFD1-205ENST00000548277 TRMT6Q9UJA5 497 aaKnown RBP11.2□□□□□ -0.62
TRAFD1-205ENST00000548277 MAD1L1Q9Y6D9 718 aa11.2□□□□□ -0.62
TRAFD1-205ENST00000548277 ARHGAP21Q5T5U3 1957 aa11.19□□□□□ -0.62
TRAFD1-205ENST00000548277 DCHS2Q6V1P9 2916 aa11.19□□□□□ -0.62
TRAFD1-205ENST00000548277 ZCWPW2A0A1B0GU75 182 aa11.19□□□□□ -0.62
TRAFD1-205ENST00000548277 FAM237BA0A1B0GVD1 139 aa11.19□□□□□ -0.62
TRAFD1-205ENST00000548277 SDR42E2A6NKP2 422 aa11.19□□□□□ -0.62
TRAFD1-205ENST00000548277 SLC16A5O15375 505 aa11.19□□□□□ -0.62
TRAFD1-205ENST00000548277 PEX1O43933 1283 aa11.19□□□□□ -0.62
TRAFD1-205ENST00000548277 PRMT3O60678 531 aa11.19□□□□□ -0.62
TRAFD1-205ENST00000548277 GALR3O60755 368 aaPredicted RBP11.19□□□□□ -0.62
TRAFD1-205ENST00000548277 CYC1P08574 325 aa11.19□□□□□ -0.62
TRAFD1-205ENST00000548277 ZNF888P0CJ79 500 aaPredicted RBP11.19□□□□□ -0.62
TRAFD1-205ENST00000548277 NPPBP16860 134 aa11.19□□□□□ -0.62
TRAFD1-205ENST00000548277 MLF1P58340 268 aa11.19□□□□□ -0.62
TRAFD1-205ENST00000548277 RAB8AP61006 207 aa11.19□□□□□ -0.62
TRAFD1-205ENST00000548277 HSP90AA5PQ58FG0 334 aa11.19□□□□□ -0.62
TRAFD1-205ENST00000548277 CATSPEREQ5SY80 951 aa11.19□□□□□ -0.62
TRAFD1-205ENST00000548277 TTC27Q6P3X3 843 aa11.19□□□□□ -0.62
TRAFD1-205ENST00000548277 RPRMLQ8N4K4 120 aa11.19□□□□□ -0.62
TRAFD1-205ENST00000548277 MARVELD2Q8N4S9 558 aa11.19□□□□□ -0.62
TRAFD1-205ENST00000548277 OR52N2Q8NGI0 321 aa11.19□□□□□ -0.62
TRAFD1-205ENST00000548277 PHF10Q8WUB8 498 aaKnown RBP11.19□□□□□ -0.62
TRAFD1-205ENST00000548277 KCNJ9Q92806 393 aa11.19□□□□□ -0.62
TRAFD1-205ENST00000548277 MAGOHBQ96A72 148 aaKnown RBP11.19□□□□□ -0.62
TRAFD1-205ENST00000548277 AARSD1Q9BTE6 412 aaKnown RBP11.19□□□□□ -0.62
TRAFD1-205ENST00000548277 PCBD2Q9H0N5 130 aa11.19□□□□□ -0.62
TRAFD1-205ENST00000548277 LIN28AQ9H9Z2 209 aaKnown RBP11.19□□□□□ -0.62
TRAFD1-205ENST00000548277 NECTIN3Q9NQS3 549 aa11.19□□□□□ -0.62
TRAFD1-205ENST00000548277 FBXO5Q9UKT4 447 aa11.19□□□□□ -0.62
TRAFD1-205ENST00000548277 FBXW2Q9UKT8 454 aa11.19□□□□□ -0.62
TRAFD1-205ENST00000548277 SLC22A7Q9Y694 548 aa11.19□□□□□ -0.62
TRAFD1-205ENST00000548277 MPDZO75970 2070 aa11.19□□□□□ -0.62
TRAFD1-205ENST00000548277 NCKAP5O14513 1909 aa11.19□□□□□ -0.62
TRAFD1-205ENST00000548277 ANKRD17O75179 2603 aaKnown RBP11.19□□□□□ -0.62
TRAFD1-205ENST00000548277 AKAP9Q99996 3911 aa11.18□□□□□ -0.62
TRAFD1-205ENST00000548277 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.18□□□□□ -0.62
TRAFD1-205ENST00000548277 MAGEB16A2A368 324 aa11.18□□□□□ -0.62
TRAFD1-205ENST00000548277 GUCA1CO95843 209 aa11.18□□□□□ -0.62
TRAFD1-205ENST00000548277 HIST1H2AGP0C0S8 130 aaPredicted RBP11.18□□□□□ -0.62
TRAFD1-205ENST00000548277 ALOX12P18054 663 aa11.18□□□□□ -0.62
TRAFD1-205ENST00000548277 HIST1H2ADP20671 130 aa11.18□□□□□ -0.62
TRAFD1-205ENST00000548277 MAGEA6P43360 314 aa11.18□□□□□ -0.62
TRAFD1-205ENST00000548277 HLCSP50747 726 aa11.18□□□□□ -0.62
TRAFD1-205ENST00000548277 CCR8P51685 355 aa11.18□□□□□ -0.62
TRAFD1-205ENST00000548277 ART1P52961 327 aa11.18□□□□□ -0.62
TRAFD1-205ENST00000548277 HERC3Q15034 1050 aa11.18□□□□□ -0.62
TRAFD1-205ENST00000548277 PHKG1Q16816 387 aa11.18□□□□□ -0.62
TRAFD1-205ENST00000548277 PAQR3Q6TCH7 311 aa11.18□□□□□ -0.62
TRAFD1-205ENST00000548277 LCTLQ6UWM7 567 aa11.18□□□□□ -0.62
TRAFD1-205ENST00000548277 C16orf47Q6ZP98 133 aaPredicted RBP11.18□□□□□ -0.62
TRAFD1-205ENST00000548277 MDGA2Q7Z553 956 aa11.18□□□□□ -0.62
TRAFD1-205ENST00000548277 PCGF5Q86SE9 256 aa11.18□□□□□ -0.62
TRAFD1-205ENST00000548277 TMEM200AQ86VY9 491 aa11.18□□□□□ -0.62
TRAFD1-205ENST00000548277 CCDC71Q8IV32 467 aaPredicted RBP11.18□□□□□ -0.62
TRAFD1-205ENST00000548277 MYO1HQ8N1T3 1032 aa11.18□□□□□ -0.62
TRAFD1-205ENST00000548277 RASGEF1CQ8N431 466 aa11.18□□□□□ -0.62
TRAFD1-205ENST00000548277 TMEM156Q8N614 296 aa11.18□□□□□ -0.62
TRAFD1-205ENST00000548277 FAM57AQ8TBR7 257 aa11.18□□□□□ -0.62
TRAFD1-205ENST00000548277 SNF8Q96H20 258 aa11.18□□□□□ -0.62
TRAFD1-205ENST00000548277 PBKQ96KB5 322 aa11.18□□□□□ -0.62
TRAFD1-205ENST00000548277 HIST1H2AHQ96KK5 128 aa11.18□□□□□ -0.62
TRAFD1-205ENST00000548277 OR1F2PQ96R84 312 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms