RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 GARNL3Q5VVW2 1013 aa15.1■□□□□ 0.01
TRAFD1-203ENST00000547063 TMPRSS9Q7Z410 1059 aa15.1■□□□□ 0.01
TRAFD1-203ENST00000547063 BPHLQ86WA6 291 aaPredicted RBP15.1■□□□□ 0.01
TRAFD1-203ENST00000547063 GPR135Q8IZ08 494 aa15.1■□□□□ 0.01
TRAFD1-203ENST00000547063 OR4N4Q8N0Y3 316 aa15.1■□□□□ 0.01
TRAFD1-203ENST00000547063 METTL4Q8N3J2 472 aa15.1■□□□□ 0.01
TRAFD1-203ENST00000547063 RNF175Q8N4F7 328 aa15.1■□□□□ 0.01
TRAFD1-203ENST00000547063 TTC29Q8NA56 475 aaPredicted RBP15.1■□□□□ 0.01
TRAFD1-203ENST00000547063 AGBL5Q8NDL9 886 aa15.1■□□□□ 0.01
TRAFD1-203ENST00000547063 CHTF18Q8WVB6 975 aa15.1■□□□□ 0.01
TRAFD1-203ENST00000547063 MS4A6EQ96DS6 147 aa15.1■□□□□ 0.01
TRAFD1-203ENST00000547063 ZNF285Q96NJ3 590 aa15.1■□□□□ 0.01
TRAFD1-203ENST00000547063 FCRL4Q96PJ5 515 aa15.1■□□□□ 0.01
TRAFD1-203ENST00000547063 KCNC2Q96PR1 638 aa15.1■□□□□ 0.01
TRAFD1-203ENST00000547063 TBCDQ9BTW9 1192 aa15.1■□□□□ 0.01
TRAFD1-203ENST00000547063 MRPL1Q9BYD6 325 aaKnown RBP15.1■□□□□ 0.01
TRAFD1-203ENST00000547063 STRADBQ9C0K7 418 aa15.1■□□□□ 0.01
TRAFD1-203ENST00000547063 ENAMQ9NRM1 1142 aa15.1■□□□□ 0.01
TRAFD1-203ENST00000547063 IRAK4Q9NWZ3 460 aa15.1■□□□□ 0.01
TRAFD1-203ENST00000547063 SERTAD3Q9UJW9 196 aa15.1■□□□□ 0.01
TRAFD1-203ENST00000547063 GFRA3O60609 400 aa15.09■□□□□ 0.01
TRAFD1-203ENST00000547063 ETHE1O95571 254 aa15.09■□□□□ 0.01
TRAFD1-203ENST00000547063 ADSLP30566 484 aaPredicted RBP15.09■□□□□ 0.01
TRAFD1-203ENST00000547063 GSTM5P46439 218 aa15.09■□□□□ 0.01
TRAFD1-203ENST00000547063 ATP4BP51164 291 aa15.09■□□□□ 0.01
TRAFD1-203ENST00000547063 TBL3Q12788 808 aaKnown RBP15.09■□□□□ 0.01
TRAFD1-203ENST00000547063 GRM7Q14831 915 aa15.09■□□□□ 0.01
TRAFD1-203ENST00000547063 RPS6KA2Q15349 733 aa15.09■□□□□ 0.01
TRAFD1-203ENST00000547063 DEFB110Q30KQ9 67 aa15.09■□□□□ 0.01
TRAFD1-203ENST00000547063 FAM214AQ32MH5 1076 aa15.09■□□□□ 0.01
TRAFD1-203ENST00000547063 WASHC2DQ5SRD0 308 aa15.09■□□□□ 0.01
TRAFD1-203ENST00000547063 YOD1Q5VVQ6 348 aaPredicted RBP15.09■□□□□ 0.01
TRAFD1-203ENST00000547063 FAM219BQ5XKK7 198 aa15.09■□□□□ 0.01
TRAFD1-203ENST00000547063 GALNT18Q6P9A2 607 aa15.09■□□□□ 0.01
TRAFD1-203ENST00000547063 TLDC1Q6P9B6 456 aa15.09■□□□□ 0.01
TRAFD1-203ENST00000547063 NUDT13Q86X67 352 aa15.09■□□□□ 0.01
TRAFD1-203ENST00000547063 C1orf52Q8N6N3 182 aaKnown RBP15.09■□□□□ 0.01
TRAFD1-203ENST00000547063 DEFB124Q8NES8 71 aa15.09■□□□□ 0.01
TRAFD1-203ENST00000547063 LRRC37BQ96QE4 947 aa15.09■□□□□ 0.01
TRAFD1-203ENST00000547063 F2RL3Q96RI0 385 aa15.09■□□□□ 0.01
TRAFD1-203ENST00000547063 FGF21Q9NSA1 209 aa15.09■□□□□ 0.01
TRAFD1-203ENST00000547063 MAPRE3Q9UPY8 281 aa15.09■□□□□ 0.01
TRAFD1-203ENST00000547063 SLC22A7Q9Y694 548 aa15.09■□□□□ 0.01
TRAFD1-203ENST00000547063 RIF1Q5UIP0 2472 aaKnown RBP15.09■□□□□ 0.01
TRAFD1-203ENST00000547063 VPS13AQ96RL7 3174 aa15.09■□□□□ 0.01
TRAFD1-203ENST00000547063 LAMA1P25391 3075 aa15.08■□□□□ 0.01
TRAFD1-203ENST00000547063 PCNX2A6NKB5 2137 aa15.08■□□□□ 0.01
TRAFD1-203ENST00000547063 ARHGAP10A1A4S6 786 aa15.08■□□□□ 0
TRAFD1-203ENST00000547063 TMEM150CB9EJG8 249 aa15.08■□□□□ 0
TRAFD1-203ENST00000547063 SLC22A2O15244 555 aa15.08■□□□□ 0
TRAFD1-203ENST00000547063 ERI3O43414 337 aaKnown RBP15.08■□□□□ 0
TRAFD1-203ENST00000547063 SH3BGRLO75368 114 aa15.08■□□□□ 0
TRAFD1-203ENST00000547063 TBX6O95947 436 aaPredicted RBP15.08■□□□□ 0
TRAFD1-203ENST00000547063 CEACAM1P13688 526 aa15.08■□□□□ 0
TRAFD1-203ENST00000547063 SDHBP21912 280 aa15.08■□□□□ 0
TRAFD1-203ENST00000547063 HNRNPH1P31943 449 aaKnown RBP15.08■□□□□ 0
TRAFD1-203ENST00000547063 SSR2P43308 183 aa15.08■□□□□ 0
TRAFD1-203ENST00000547063 ITGA1P56199 1179 aa15.08■□□□□ 0
TRAFD1-203ENST00000547063 HYAL2Q12891 473 aa15.08■□□□□ 0
TRAFD1-203ENST00000547063 HERC3Q15034 1050 aa15.08■□□□□ 0
TRAFD1-203ENST00000547063 KIAA0040Q15053 153 aa15.08■□□□□ 0
TRAFD1-203ENST00000547063 PRTGQ2VWP7 1150 aa15.08■□□□□ 0
TRAFD1-203ENST00000547063 RFTN2Q52LD8 501 aaPredicted RBP15.08■□□□□ 0
TRAFD1-203ENST00000547063 CCDC157Q569K6 752 aa15.08■□□□□ 0
TRAFD1-203ENST00000547063 IL23RQ5VWK5 629 aa15.08■□□□□ 0
TRAFD1-203ENST00000547063 OR4C11Q6IEV9 310 aa15.08■□□□□ 0
TRAFD1-203ENST00000547063 NOXRED1Q6NXP6 359 aa15.08■□□□□ 0
TRAFD1-203ENST00000547063 ABHD17CQ6PCB6 329 aa15.08■□□□□ 0
TRAFD1-203ENST00000547063 COMMD6Q7Z4G1 85 aa15.08■□□□□ 0
TRAFD1-203ENST00000547063 KIAA2013Q8IYS2 634 aa15.08■□□□□ 0
TRAFD1-203ENST00000547063 C11orf24Q96F05 449 aaPredicted RBP15.08■□□□□ 0
TRAFD1-203ENST00000547063 APIPQ96GX9 242 aa15.08■□□□□ 0
TRAFD1-203ENST00000547063 FCRL1Q96LA6 429 aa15.08■□□□□ 0
TRAFD1-203ENST00000547063 COPS7BQ9H9Q2 264 aaPredicted RBP15.08■□□□□ 0
TRAFD1-203ENST00000547063 TMEM45AQ9NWC5 275 aa15.08■□□□□ 0
TRAFD1-203ENST00000547063 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.08■□□□□ 0
TRAFD1-203ENST00000547063 MCM8Q9UJA3 840 aa15.08■□□□□ 0
TRAFD1-203ENST00000547063 WBP11Q9Y2W2 641 aaKnown RBP15.08■□□□□ 0
TRAFD1-203ENST00000547063 FAM186AA6NE01 2351 aa15.07■□□□□ 0
TRAFD1-203ENST00000547063 ZFHX2Q9C0A1 2572 aaPredicted RBP15.07■□□□□ 0
TRAFD1-203ENST00000547063 GNG14A0A1W2PPG7 69 aa15.07■□□□□ 0
TRAFD1-203ENST00000547063 FITM1A5D6W6 292 aa15.07■□□□□ 0
TRAFD1-203ENST00000547063 SAP18O00422 153 aaKnown RBP15.07■□□□□ 0
TRAFD1-203ENST00000547063 PLPP1O14494 284 aa15.07■□□□□ 0
TRAFD1-203ENST00000547063 SLC30A4O14863 429 aa15.07■□□□□ 0
TRAFD1-203ENST00000547063 P2RX6O15547 441 aa15.07■□□□□ 0
TRAFD1-203ENST00000547063 GUCY1B2O75343 617 aa15.07■□□□□ 0
TRAFD1-203ENST00000547063 OR2B3O76000 313 aa15.07■□□□□ 0
TRAFD1-203ENST00000547063 ANXA4P09525 319 aaPredicted RBP15.07■□□□□ 0
TRAFD1-203ENST00000547063 FOLR1P15328 257 aa15.07■□□□□ 0
TRAFD1-203ENST00000547063 ALOX12P18054 663 aa15.07■□□□□ 0
TRAFD1-203ENST00000547063 TIA1P31483 386 aaKnown RBP eCLIP15.07■□□□□ 0
TRAFD1-203ENST00000547063 ASMTP46597 345 aa15.07■□□□□ 0
TRAFD1-203ENST00000547063 MRPL19P49406 292 aaKnown RBP15.07■□□□□ 0
TRAFD1-203ENST00000547063 PLA2G16P53816 162 aa15.07■□□□□ 0
TRAFD1-203ENST00000547063 ARSFP54793 590 aa15.07■□□□□ 0
TRAFD1-203ENST00000547063 INSM1Q01101 510 aaPredicted RBP15.07■□□□□ 0
TRAFD1-203ENST00000547063 SQLEQ14534 574 aa15.07■□□□□ 0
TRAFD1-203ENST00000547063 KCNAB1Q14722 419 aa15.07■□□□□ 0
TRAFD1-203ENST00000547063 GPR19Q15760 415 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms