RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 CLCQ05315 142 aa13.73□□□□□ -0.21
DDX54-203ENST00000546869 TRAF3Q13114 568 aa13.73□□□□□ -0.21
DDX54-203ENST00000546869 COL28A1Q2UY09 1125 aa13.73□□□□□ -0.21
DDX54-203ENST00000546869 ARHGAP40Q5TG30 622 aa13.73□□□□□ -0.21
DDX54-203ENST00000546869 SRFBP1Q8NEF9 429 aaKnown RBP13.73□□□□□ -0.21
DDX54-203ENST00000546869 OR52B6Q8NGF0 335 aa13.73□□□□□ -0.21
DDX54-203ENST00000546869 WDR20Q8TBZ3 569 aa13.73□□□□□ -0.21
DDX54-203ENST00000546869 ADAMTS17Q8TE56 1095 aa13.73□□□□□ -0.21
DDX54-203ENST00000546869 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.73□□□□□ -0.21
DDX54-203ENST00000546869 THAP4Q8WY91 577 aa13.73□□□□□ -0.21
DDX54-203ENST00000546869 ATP6V1E2Q96A05 226 aa13.73□□□□□ -0.21
DDX54-203ENST00000546869 GAL3ST3Q96A11 431 aa13.73□□□□□ -0.21
DDX54-203ENST00000546869 NSUN5Q96P11 429 aaKnown RBP13.73□□□□□ -0.21
DDX54-203ENST00000546869 IP6K3Q96PC2 410 aa13.73□□□□□ -0.21
DDX54-203ENST00000546869 TMEM237Q96Q45 408 aa13.73□□□□□ -0.21
DDX54-203ENST00000546869 RUFY1Q96T51 708 aa13.73□□□□□ -0.21
DDX54-203ENST00000546869 SPSB2Q99619 263 aa13.73□□□□□ -0.21
DDX54-203ENST00000546869 MKKSQ9NPJ1 570 aaPredicted RBP13.73□□□□□ -0.21
DDX54-203ENST00000546869 C14orf105Q9NVL8 296 aa13.73□□□□□ -0.21
DDX54-203ENST00000546869 ARGLU1Q9NWB6 273 aaPredicted RBP13.73□□□□□ -0.21
DDX54-203ENST00000546869 MRPS18BQ9Y676 258 aaKnown RBP13.73□□□□□ -0.21
DDX54-203ENST00000546869 MDC1Q14676 2089 aaKnown RBP13.73□□□□□ -0.21
DDX54-203ENST00000546869 FOXE1O00358 373 aaPredicted RBP13.72□□□□□ -0.21
DDX54-203ENST00000546869 PCDH17O14917 1159 aa13.72□□□□□ -0.21
DDX54-203ENST00000546869 NKX2-8O15522 239 aa13.72□□□□□ -0.21
DDX54-203ENST00000546869 SUPT7LO94864 414 aa13.72□□□□□ -0.21
DDX54-203ENST00000546869 MLYCDO95822 493 aa13.72□□□□□ -0.21
DDX54-203ENST00000546869 SERPIND1P05546 499 aa13.72□□□□□ -0.21
DDX54-203ENST00000546869 H2AFXP16104 143 aaPredicted RBP13.72□□□□□ -0.21
DDX54-203ENST00000546869 FBLP22087 321 aaKnown RBP13.72□□□□□ -0.21
DDX54-203ENST00000546869 SNRPNP63162 240 aaKnown RBP13.72□□□□□ -0.21
DDX54-203ENST00000546869 RHDQ02161 417 aa13.72□□□□□ -0.21
DDX54-203ENST00000546869 OCA2Q04671 838 aa13.72□□□□□ -0.21
DDX54-203ENST00000546869 CDC20Q12834 499 aa13.72□□□□□ -0.21
DDX54-203ENST00000546869 CASP8Q14790 479 aa13.72□□□□□ -0.21
DDX54-203ENST00000546869 SLC9A5Q14940 896 aa13.72□□□□□ -0.21
DDX54-203ENST00000546869 TMEM35AQ53FP2 167 aa13.72□□□□□ -0.21
DDX54-203ENST00000546869 C19orf48Q6RUI8 117 aa13.72□□□□□ -0.21
DDX54-203ENST00000546869 CHSY3Q70JA7 882 aa13.72□□□□□ -0.21
DDX54-203ENST00000546869 MILR1Q7Z6M3 343 aa13.72□□□□□ -0.21
DDX54-203ENST00000546869 EXOC3L1Q86VI1 746 aa13.72□□□□□ -0.21
DDX54-203ENST00000546869 PDSS2Q86YH6 399 aa13.72□□□□□ -0.21
DDX54-203ENST00000546869 HOMEZQ8IX15 550 aa13.72□□□□□ -0.21
DDX54-203ENST00000546869 DTWD1Q8N5C7 304 aa13.72□□□□□ -0.21
DDX54-203ENST00000546869 OR2L5Q8NG80 312 aa13.72□□□□□ -0.21
DDX54-203ENST00000546869 OR9A4Q8NGU2 314 aa13.72□□□□□ -0.21
DDX54-203ENST00000546869 TCP10LQ8TDR4 215 aa13.72□□□□□ -0.21
DDX54-203ENST00000546869 PPP4R1Q8TF05 950 aa13.72□□□□□ -0.21
DDX54-203ENST00000546869 MS4A6EQ96DS6 147 aa13.72□□□□□ -0.21
DDX54-203ENST00000546869 CMTM7Q96FZ5 175 aa13.72□□□□□ -0.21
DDX54-203ENST00000546869 ZNF382Q96SR6 550 aa13.72□□□□□ -0.21
DDX54-203ENST00000546869 REXO4Q9GZR2 422 aaKnown RBP13.72□□□□□ -0.21
DDX54-203ENST00000546869 AICDAQ9GZX7 198 aa13.72□□□□□ -0.21
DDX54-203ENST00000546869 STMN4Q9H169 189 aaPredicted RBP13.72□□□□□ -0.21
DDX54-203ENST00000546869 SEMA4BQ9NPR2 832 aaPredicted RBP13.72□□□□□ -0.21
DDX54-203ENST00000546869 WDR70Q9NW82 654 aa13.72□□□□□ -0.21
DDX54-203ENST00000546869 RNF11Q9Y3C5 154 aa13.72□□□□□ -0.21
DDX54-203ENST00000546869 NAALAD2Q9Y3Q0 740 aa13.72□□□□□ -0.21
DDX54-203ENST00000546869 MAU2Q9Y6X3 613 aa13.72□□□□□ -0.21
DDX54-203ENST00000546869 KMT2BQ9UMN6 2715 aaPredicted RBP13.72□□□□□ -0.21
DDX54-203ENST00000546869 CELSR3Q9NYQ7 3312 aa13.71□□□□□ -0.21
DDX54-203ENST00000546869 A0A088AWK7 358 aa13.71□□□□□ -0.21
DDX54-203ENST00000546869 ZZEF1O43149 2961 aa13.71□□□□□ -0.21
DDX54-203ENST00000546869 KLHL18O94889 574 aa13.71□□□□□ -0.21
DDX54-203ENST00000546869 IGHEP01854 428 aa13.71□□□□□ -0.21
DDX54-203ENST00000546869 STATHP02808 62 aa13.71□□□□□ -0.21
DDX54-203ENST00000546869 ZGLP1P0C6A0 271 aa13.71□□□□□ -0.21
DDX54-203ENST00000546869 MYZAPP0CAP1 466 aa13.71□□□□□ -0.21
DDX54-203ENST00000546869 ZNF888P0CJ79 500 aaPredicted RBP13.71□□□□□ -0.21
DDX54-203ENST00000546869 IL1RNP18510 177 aa13.71□□□□□ -0.21
DDX54-203ENST00000546869 ZNF10P21506 573 aaPredicted RBP13.71□□□□□ -0.21
DDX54-203ENST00000546869 FOLR3P41439 243 aa13.71□□□□□ -0.21
DDX54-203ENST00000546869 TSFMP43897 325 aaKnown RBP13.71□□□□□ -0.21
DDX54-203ENST00000546869 CDH13P55290 713 aa13.71□□□□□ -0.21
DDX54-203ENST00000546869 PKNOX1P55347 436 aa13.71□□□□□ -0.21
DDX54-203ENST00000546869 CYP4F2P78329 520 aa13.71□□□□□ -0.21
DDX54-203ENST00000546869 ZNF33BQ06732 778 aa13.71□□□□□ -0.21
DDX54-203ENST00000546869 TGM3Q08188 693 aa13.71□□□□□ -0.21
DDX54-203ENST00000546869 ASPHQ12797 758 aa13.71□□□□□ -0.21
DDX54-203ENST00000546869 LCP2Q13094 533 aa13.71□□□□□ -0.21
DDX54-203ENST00000546869 CPSF6Q16630 551 aaKnown RBP eCLIP13.71□□□□□ -0.21
DDX54-203ENST00000546869 DEPDC1Q5TB30 811 aa13.71□□□□□ -0.21
DDX54-203ENST00000546869 LIPMQ5VYY2 423 aa13.71□□□□□ -0.21
DDX54-203ENST00000546869 ABHD17CQ6PCB6 329 aa13.71□□□□□ -0.21
DDX54-203ENST00000546869 PRSS41Q7RTY9 318 aa13.71□□□□□ -0.21
DDX54-203ENST00000546869 METTL27Q8N6F8 245 aaPredicted RBP13.71□□□□□ -0.21
DDX54-203ENST00000546869 OR4F6Q8NGB9 312 aa13.71□□□□□ -0.21
DDX54-203ENST00000546869 STT3BQ8TCJ2 826 aa13.71□□□□□ -0.21
DDX54-203ENST00000546869 MIEF2Q96C03 454 aa13.71□□□□□ -0.21
DDX54-203ENST00000546869 OR1F2PQ96R84 312 aa13.71□□□□□ -0.21
DDX54-203ENST00000546869 NPLQ9BXD5 320 aaPredicted RBP13.71□□□□□ -0.21
DDX54-203ENST00000546869 MS4A8Q9BY19 250 aa13.71□□□□□ -0.21
DDX54-203ENST00000546869 ROGDIQ9GZN7 287 aa13.71□□□□□ -0.21
DDX54-203ENST00000546869 GSTO2Q9H4Y5 243 aa13.71□□□□□ -0.21
DDX54-203ENST00000546869 KLHL31Q9H511 634 aa13.71□□□□□ -0.21
DDX54-203ENST00000546869 SEMA3GQ9NS98 782 aa13.71□□□□□ -0.21
DDX54-203ENST00000546869 TRPC4Q9UBN4 977 aa13.71□□□□□ -0.21
DDX54-203ENST00000546869 TRPS1Q9UHF7 1281 aa13.71□□□□□ -0.21
DDX54-203ENST00000546869 ZNF225Q9UK10 706 aa13.71□□□□□ -0.21
DDX54-203ENST00000546869 PTRH2Q9Y3E5 179 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms