RNA–Protein interactions for RNA: ENST00000546718.5

USP15-206, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-206ENST00000546718 TBC1D20Q96BZ9 403 aa13.54□□□□□ -0.24
USP15-206ENST00000546718 GPR21Q99679 349 aa13.54□□□□□ -0.24
USP15-206ENST00000546718 UCK2Q9BZX2 261 aa13.54□□□□□ -0.24
USP15-206ENST00000546718 RNF6Q9Y252 685 aa13.54□□□□□ -0.24
USP15-206ENST00000546718 VPS9D1Q9Y2B5 631 aa13.54□□□□□ -0.24
USP15-206ENST00000546718 DHRS7Q9Y394 339 aa13.54□□□□□ -0.24
USP15-206ENST00000546718 SAGE2PA6NJ88 616 aa13.53□□□□□ -0.24
USP15-206ENST00000546718 CDK2AP1O14519 115 aa13.53□□□□□ -0.24
USP15-206ENST00000546718 NDUFS4O43181 175 aa13.53□□□□□ -0.24
USP15-206ENST00000546718 TOXO94900 526 aa13.53□□□□□ -0.24
USP15-206ENST00000546718 CHRNB4P30926 498 aa13.53□□□□□ -0.24
USP15-206ENST00000546718 SLC1A2P43004 574 aa13.53□□□□□ -0.24
USP15-206ENST00000546718 CDK16Q00536 496 aa13.53□□□□□ -0.24
USP15-206ENST00000546718 HERC3Q15034 1050 aa13.53□□□□□ -0.24
USP15-206ENST00000546718 DEFB134Q4QY38 66 aa13.53□□□□□ -0.24
USP15-206ENST00000546718 EMC4Q5J8M3 183 aa13.53□□□□□ -0.24
USP15-206ENST00000546718 C4orf22Q6V702 233 aa13.53□□□□□ -0.24
USP15-206ENST00000546718 C17orf64Q86WR6 236 aa13.53□□□□□ -0.24
USP15-206ENST00000546718 SULF2Q8IWU5 870 aa13.53□□□□□ -0.24
USP15-206ENST00000546718 DMRTC2Q8IXT2 367 aaPredicted RBP13.53□□□□□ -0.24
USP15-206ENST00000546718 POGLUT1Q8NBL1 392 aa13.53□□□□□ -0.24
USP15-206ENST00000546718 MFSD9Q8NBP5 474 aa13.53□□□□□ -0.24
USP15-206ENST00000546718 NFAM1Q8NET5 270 aaPredicted RBP13.53□□□□□ -0.24
USP15-206ENST00000546718 LILRB4Q8NHJ6 448 aa13.53□□□□□ -0.24
USP15-206ENST00000546718 TMEM125Q96AQ2 219 aa13.53□□□□□ -0.24
USP15-206ENST00000546718 BAG1Q99933 345 aaPredicted RBP13.53□□□□□ -0.24
USP15-206ENST00000546718 TMUB1Q9BVT8 246 aa13.53□□□□□ -0.24
USP15-206ENST00000546718 SGPP1Q9BX95 441 aa13.53□□□□□ -0.24
USP15-206ENST00000546718 FAM129AQ9BZQ8 928 aa13.53□□□□□ -0.24
USP15-206ENST00000546718 PCBD2Q9H0N5 130 aa13.53□□□□□ -0.24
USP15-206ENST00000546718 ATG10Q9H0Y0 220 aa13.53□□□□□ -0.24
USP15-206ENST00000546718 METRNQ9UJH8 293 aa13.53□□□□□ -0.24
USP15-206ENST00000546718 PDE10AQ9Y233 779 aa13.53□□□□□ -0.24
USP15-206ENST00000546718 IGKV3D-11A0A0A0MRZ8 115 aa13.52□□□□□ -0.25
USP15-206ENST00000546718 ZCWPW2A0A1B0GU75 182 aa13.52□□□□□ -0.25
USP15-206ENST00000546718 CTAGE9A4FU28 777 aa13.52□□□□□ -0.25
USP15-206ENST00000546718 CHST10O43529 356 aa13.52□□□□□ -0.25
USP15-206ENST00000546718 CDC40O60508 579 aaKnown RBP eCLIP13.52□□□□□ -0.25
USP15-206ENST00000546718 B4GALT2O60909 372 aa13.52□□□□□ -0.25
USP15-206ENST00000546718 HOXB4P17483 251 aaPredicted RBP13.52□□□□□ -0.25
USP15-206ENST00000546718 PAMP19021 973 aa13.52□□□□□ -0.25
USP15-206ENST00000546718 TFEBP19484 476 aa13.52□□□□□ -0.25
USP15-206ENST00000546718 MAOAP21397 527 aa13.52□□□□□ -0.25
USP15-206ENST00000546718 DNAJA1P31689 397 aaKnown RBP13.52□□□□□ -0.25
USP15-206ENST00000546718 KCNJ1P48048 391 aa13.52□□□□□ -0.25
USP15-206ENST00000546718 TERF1P54274 439 aa13.52□□□□□ -0.25
USP15-206ENST00000546718 BTG2P78543 158 aa13.52□□□□□ -0.25
USP15-206ENST00000546718 MEF2AQ02078 507 aaPredicted RBP13.52□□□□□ -0.25
USP15-206ENST00000546718 ANKRD22Q5VYY1 191 aa13.52□□□□□ -0.25
USP15-206ENST00000546718 CASC4Q6P4E1 433 aa13.52□□□□□ -0.25
USP15-206ENST00000546718 AGTRAPQ6RW13 159 aa13.52□□□□□ -0.25
USP15-206ENST00000546718 MDGA2Q7Z553 956 aa13.52□□□□□ -0.25
USP15-206ENST00000546718 CAND1Q86VP6 1230 aaKnown RBP13.52□□□□□ -0.25
USP15-206ENST00000546718 TMEM200AQ86VY9 491 aa13.52□□□□□ -0.25
USP15-206ENST00000546718 CCDC71Q8IV32 467 aaPredicted RBP13.52□□□□□ -0.25
USP15-206ENST00000546718 ZFP62Q8NB50 900 aaPredicted RBP13.52□□□□□ -0.25
USP15-206ENST00000546718 APCDD1LQ8NCL9 501 aa13.52□□□□□ -0.25
USP15-206ENST00000546718 C16orf52Q8NHV5 167 aa13.52□□□□□ -0.25
USP15-206ENST00000546718 ASB5Q8WWX0 329 aa13.52□□□□□ -0.25
USP15-206ENST00000546718 ZNF669Q96BR6 464 aaPredicted RBP13.52□□□□□ -0.25
USP15-206ENST00000546718 SEC16BQ96JE7 1060 aa13.52□□□□□ -0.25
USP15-206ENST00000546718 TSGA10Q9BZW7 698 aa13.52□□□□□ -0.25
USP15-206ENST00000546718 KLF13Q9Y2Y9 288 aaPredicted RBP13.52□□□□□ -0.25
USP15-206ENST00000546718 ABCA2Q9BZC7 2435 aa13.52□□□□□ -0.25
USP15-206ENST00000546718 FAM237BA0A1B0GVD1 139 aa13.51□□□□□ -0.25
USP15-206ENST00000546718 TCRBV16S1A1N1A0A5B0 115 aa13.51□□□□□ -0.25
USP15-206ENST00000546718 CTAGE15A4D2H0 777 aa13.51□□□□□ -0.25
USP15-206ENST00000546718 FOXO6A8MYZ6 492 aa13.51□□□□□ -0.25
USP15-206ENST00000546718 PEX1O43933 1283 aa13.51□□□□□ -0.25
USP15-206ENST00000546718 NADKO95544 446 aaPredicted RBP13.51□□□□□ -0.25
USP15-206ENST00000546718 ZNF888P0CJ79 500 aaPredicted RBP13.51□□□□□ -0.25
USP15-206ENST00000546718 NPPBP16860 134 aa13.51□□□□□ -0.25
USP15-206ENST00000546718 ALOX12P18054 663 aa13.51□□□□□ -0.25
USP15-206ENST00000546718 JAK1P23458 1154 aa13.51□□□□□ -0.25
USP15-206ENST00000546718 MAGEA6P43360 314 aa13.51□□□□□ -0.25
USP15-206ENST00000546718 GPR85P60893 370 aa13.51□□□□□ -0.25
USP15-206ENST00000546718 TIAL1Q01085 375 aaKnown RBP eCLIP13.51□□□□□ -0.25
USP15-206ENST00000546718 NAE1Q13564 534 aa13.51□□□□□ -0.25
USP15-206ENST00000546718 DHX34Q14147 1143 aaKnown RBP13.51□□□□□ -0.25
USP15-206ENST00000546718 PHKG1Q16816 387 aa13.51□□□□□ -0.25
USP15-206ENST00000546718 LCTLQ6UWM7 567 aa13.51□□□□□ -0.25
USP15-206ENST00000546718 QSOX2Q6ZRP7 698 aa13.51□□□□□ -0.25
USP15-206ENST00000546718 GSTA5Q7RTV2 222 aa13.51□□□□□ -0.25
USP15-206ENST00000546718 CTAGE6Q86UF2 777 aa13.51□□□□□ -0.25
USP15-206ENST00000546718 CYP4X1Q8N118 509 aa13.51□□□□□ -0.25
USP15-206ENST00000546718 ABHD11Q8NFV4 315 aa13.51□□□□□ -0.25
USP15-206ENST00000546718 OR52N2Q8NGI0 321 aa13.51□□□□□ -0.25
USP15-206ENST00000546718 PTCHD1Q96NR3 888 aa13.51□□□□□ -0.25
USP15-206ENST00000546718 SARGQ9BW04 601 aa13.51□□□□□ -0.25
USP15-206ENST00000546718 CCDC68Q9H2F9 335 aa13.51□□□□□ -0.25
USP15-206ENST00000546718 SPNS1Q9H2V7 528 aa13.51□□□□□ -0.25
USP15-206ENST00000546718 TP63Q9H3D4 680 aaPredicted RBP13.51□□□□□ -0.25
USP15-206ENST00000546718 AKAP6Q13023 2319 aa13.5□□□□□ -0.25
USP15-206ENST00000546718 ZNF407Q9C0G0 2248 aa13.5□□□□□ -0.25
USP15-206ENST00000546718 EIF3FO00303 357 aaPredicted RBP13.5□□□□□ -0.25
USP15-206ENST00000546718 FCHO1O14526 889 aa13.5□□□□□ -0.25
USP15-206ENST00000546718 CEP104O60308 925 aa13.5□□□□□ -0.25
USP15-206ENST00000546718 PRMT3O60678 531 aa13.5□□□□□ -0.25
USP15-206ENST00000546718 PDE9AO76083 593 aa13.5□□□□□ -0.25
USP15-206ENST00000546718 HOXD4P09016 255 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms