RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 MAGP20916 626 aa11.44□□□□□ -0.58
CCDC38-202ENST00000546386 PRPS1L1P21108 318 aa11.44□□□□□ -0.58
CCDC38-202ENST00000546386 IL10P22301 178 aa11.44□□□□□ -0.58
CCDC38-202ENST00000546386 TIA1P31483 386 aaKnown RBP eCLIP11.44□□□□□ -0.58
CCDC38-202ENST00000546386 BCL6P41182 706 aa11.44□□□□□ -0.58
CCDC38-202ENST00000546386 GSSP48637 474 aa11.44□□□□□ -0.58
CCDC38-202ENST00000546386 PRKAG1P54619 331 aa11.44□□□□□ -0.58
CCDC38-202ENST00000546386 IRX1P78414 480 aaPredicted RBP11.44□□□□□ -0.58
CCDC38-202ENST00000546386 PDK3Q15120 406 aa11.44□□□□□ -0.58
CCDC38-202ENST00000546386 DEFB110Q30KQ9 67 aa11.44□□□□□ -0.58
CCDC38-202ENST00000546386 SIX5Q8N196 739 aa11.44□□□□□ -0.58
CCDC38-202ENST00000546386 SMYD1Q8NB12 490 aa11.44□□□□□ -0.58
CCDC38-202ENST00000546386 ZNF548Q8NEK5 533 aaPredicted RBP11.44□□□□□ -0.58
CCDC38-202ENST00000546386 C16orf78Q8WTQ4 265 aa11.44□□□□□ -0.58
CCDC38-202ENST00000546386 RAB8BQ92930 207 aa11.44□□□□□ -0.58
CCDC38-202ENST00000546386 SLC6A18Q96N87 628 aa11.44□□□□□ -0.58
CCDC38-202ENST00000546386 TPT1P8Q9HAU6 139 aa11.44□□□□□ -0.58
CCDC38-202ENST00000546386 SLC6A20Q9NP91 592 aa11.44□□□□□ -0.58
CCDC38-202ENST00000546386 SLAMF7Q9NQ25 335 aa11.44□□□□□ -0.58
CCDC38-202ENST00000546386 CCM2LQ9NUG4 571 aaPredicted RBP11.44□□□□□ -0.58
CCDC38-202ENST00000546386 C6orf203Q9P0P8 240 aaPredicted RBP11.44□□□□□ -0.58
CCDC38-202ENST00000546386 CACNA1EQ15878 2313 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 FAM170BA6NMN3 283 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 SCAMP2O15127 329 aaKnown RBP11.43□□□□□ -0.58
CCDC38-202ENST00000546386 HCRTR1O43613 425 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 FKBP9O95302 570 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 SNAP29O95721 258 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 LYNP07948 512 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 UQCRBP14927 111 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 TPP2P29144 1249 aaPredicted RBP11.43□□□□□ -0.58
CCDC38-202ENST00000546386 POLR2IP36954 125 aaKnown RBP11.43□□□□□ -0.58
CCDC38-202ENST00000546386 SRP54P61011 504 aaKnown RBP11.43□□□□□ -0.58
CCDC38-202ENST00000546386 NAA20P61599 178 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 CSNK1G2P78368 415 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 CDKL4Q5MAI5 379 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 PTCRAQ6ISU1 281 aaPredicted RBP11.43□□□□□ -0.58
CCDC38-202ENST00000546386 FKBP9P1Q75LS8 142 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 OR4N5Q8IXE1 308 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 ARSGQ96EG1 525 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 C11orf24Q96F05 449 aaPredicted RBP11.43□□□□□ -0.58
CCDC38-202ENST00000546386 NECTIN4Q96NY8 510 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 TEFMQ96QE5 360 aaKnown RBP11.43□□□□□ -0.58
CCDC38-202ENST00000546386 OR2M4Q96R27 311 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 PHOX2BQ99453 314 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 RHBGQ9H310 441 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 MRPS30Q9NP92 439 aaKnown RBP11.43□□□□□ -0.58
CCDC38-202ENST00000546386 LHX9Q9NQ69 397 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 ANAPC2Q9UJX6 822 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 FBXL21Q9UKT6 434 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 FZD4Q9ULV1 537 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 CNTRLQ7Z7A1 2325 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 OR6C74A6NCV1 312 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 MYO1GB0I1T2 1018 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 PRPS2P11908 318 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 HNRNPA2B1P22626 353 aaKnown RBP11.43□□□□□ -0.58
CCDC38-202ENST00000546386 GCKP35557 465 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 RAB28P51157 221 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 MAPK12P53778 367 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 CDH15P55291 814 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 ID2Q02363 134 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 VAC14Q08AM6 782 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 TRAP1Q12931 704 aaKnown RBP11.43□□□□□ -0.58
CCDC38-202ENST00000546386 GRIK2Q13002 908 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 GPR18Q14330 331 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 PAGE2BQ5JRK9 111 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 KIAA1161Q6NSJ0 714 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 ZFP1Q6P2D0 407 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 PRMT9Q6P2P2 845 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 TNFAIP8L2Q6P589 184 aaPredicted RBP11.43□□□□□ -0.58
CCDC38-202ENST00000546386 TMEM179BQ7Z7N9 219 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 ZC3H7AQ8IWR0 971 aaKnown RBP11.43□□□□□ -0.58
CCDC38-202ENST00000546386 SIMC1Q8NDZ2 872 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 CDX2Q99626 313 aaPredicted RBP11.43□□□□□ -0.58
CCDC38-202ENST00000546386 GPATCH2Q9NW75 528 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 KLHL3Q9UH77 587 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 MMP17Q9ULZ9 603 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 ZNF451Q9Y4E5 1061 aa11.43□□□□□ -0.58
CCDC38-202ENST00000546386 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.42□□□□□ -0.58
CCDC38-202ENST00000546386 B4DGG1 531 aa11.42□□□□□ -0.58
CCDC38-202ENST00000546386 GNGT2O14610 69 aa11.42□□□□□ -0.58
CCDC38-202ENST00000546386 GPR37O15354 613 aa11.42□□□□□ -0.58
CCDC38-202ENST00000546386 ERI3O43414 337 aaKnown RBP11.42□□□□□ -0.58
CCDC38-202ENST00000546386 CREG1O75629 220 aa11.42□□□□□ -0.58
CCDC38-202ENST00000546386 FASP25445 335 aa11.42□□□□□ -0.58
CCDC38-202ENST00000546386 CCR8P51685 355 aa11.42□□□□□ -0.58
CCDC38-202ENST00000546386 CYP2A13Q16696 494 aa11.42□□□□□ -0.58
CCDC38-202ENST00000546386 LCN8Q6JVE9 175 aa11.42□□□□□ -0.58
CCDC38-202ENST00000546386 UNC5DQ6UXZ4 953 aa11.42□□□□□ -0.58
CCDC38-202ENST00000546386 ZNF793Q6ZN11 406 aa11.42□□□□□ -0.58
CCDC38-202ENST00000546386 TAF8Q7Z7C8 310 aa11.42□□□□□ -0.58
CCDC38-202ENST00000546386 GALNT5Q7Z7M9 940 aa11.42□□□□□ -0.58
CCDC38-202ENST00000546386 STK32CQ86UX6 486 aa11.42□□□□□ -0.58
CCDC38-202ENST00000546386 RNF130Q86XS8 419 aa11.42□□□□□ -0.58
CCDC38-202ENST00000546386 TBC1D21Q8IYX1 336 aa11.42□□□□□ -0.58
CCDC38-202ENST00000546386 ADCY4Q8NFM4 1077 aa11.42□□□□□ -0.58
CCDC38-202ENST00000546386 OR52J3Q8NH60 311 aa11.42□□□□□ -0.58
CCDC38-202ENST00000546386 SMPDL3AQ92484 453 aa11.42□□□□□ -0.58
CCDC38-202ENST00000546386 CXorf40BQ96DE9 158 aa11.42□□□□□ -0.58
CCDC38-202ENST00000546386 PRPF18Q99633 342 aaKnown RBP11.42□□□□□ -0.58
CCDC38-202ENST00000546386 EFCAB11Q9BUY7 163 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms