RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 HSP90AA5PQ58FG0 334 aa11.77□□□□□ -0.53
COPS7A-221ENST00000546229 MFSD4BQ5TF39 518 aa11.77□□□□□ -0.53
COPS7A-221ENST00000546229 PAQR3Q6TCH7 311 aa11.77□□□□□ -0.53
COPS7A-221ENST00000546229 QSOX2Q6ZRP7 698 aa11.77□□□□□ -0.53
COPS7A-221ENST00000546229 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.77□□□□□ -0.53
COPS7A-221ENST00000546229 C17orf64Q86WR6 236 aa11.77□□□□□ -0.53
COPS7A-221ENST00000546229 CPSF7Q8N684 471 aaKnown RBP11.77□□□□□ -0.53
COPS7A-221ENST00000546229 APCDD1LQ8NCL9 501 aa11.77□□□□□ -0.53
COPS7A-221ENST00000546229 NT5CQ8TCD5 201 aa11.77□□□□□ -0.53
COPS7A-221ENST00000546229 AGAP11Q8TF27 550 aa11.77□□□□□ -0.53
COPS7A-221ENST00000546229 TBC1D20Q96BZ9 403 aa11.77□□□□□ -0.53
COPS7A-221ENST00000546229 SMIM10Q96HG1 83 aa11.77□□□□□ -0.53
COPS7A-221ENST00000546229 MAGED4Q96JG8 741 aa11.77□□□□□ -0.53
COPS7A-221ENST00000546229 LPAR4Q99677 370 aa11.77□□□□□ -0.53
COPS7A-221ENST00000546229 SPOCK3Q9BQ16 436 aa11.77□□□□□ -0.53
COPS7A-221ENST00000546229 FAM129AQ9BZQ8 928 aa11.77□□□□□ -0.53
COPS7A-221ENST00000546229 RUBCNLQ9H714 662 aa11.77□□□□□ -0.53
COPS7A-221ENST00000546229 PARVBQ9HBI1 364 aa11.77□□□□□ -0.53
COPS7A-221ENST00000546229 PLSCR2Q9NRY7 297 aa11.77□□□□□ -0.53
COPS7A-221ENST00000546229 HOMER3Q9NSC5 361 aa11.77□□□□□ -0.53
COPS7A-221ENST00000546229 C20orf96Q9NUD7 363 aaPredicted RBP11.77□□□□□ -0.53
COPS7A-221ENST00000546229 SAMD15Q9P1V8 674 aa11.77□□□□□ -0.53
COPS7A-221ENST00000546229 SLC17A6Q9P2U8 582 aa11.77□□□□□ -0.53
COPS7A-221ENST00000546229 ZNF223Q9UK11 482 aaPredicted RBP11.77□□□□□ -0.53
COPS7A-221ENST00000546229 NPIPA1Q9UND3 350 aa11.77□□□□□ -0.53
COPS7A-221ENST00000546229 HRH3Q9Y5N1 445 aa11.77□□□□□ -0.53
COPS7A-221ENST00000546229 TRBC2A0A5B9 178 aa11.76□□□□□ -0.53
COPS7A-221ENST00000546229 SAGE2PA6NJ88 616 aa11.76□□□□□ -0.53
COPS7A-221ENST00000546229 FAM227AF5H4B4 570 aa11.76□□□□□ -0.53
COPS7A-221ENST00000546229 TGFBR3LH3BV60 316 aa11.76□□□□□ -0.53
COPS7A-221ENST00000546229 SLC16A5O15375 505 aa11.76□□□□□ -0.53
COPS7A-221ENST00000546229 NDUFS4O43181 175 aa11.76□□□□□ -0.53
COPS7A-221ENST00000546229 SLC25A12O75746 678 aa11.76□□□□□ -0.53
COPS7A-221ENST00000546229 SLC35G6P0C7Q6 338 aa11.76□□□□□ -0.53
COPS7A-221ENST00000546229 CCND1P24385 295 aa11.76□□□□□ -0.53
COPS7A-221ENST00000546229 PTGER1P34995 402 aa11.76□□□□□ -0.53
COPS7A-221ENST00000546229 SCTRP47872 440 aa11.76□□□□□ -0.53
COPS7A-221ENST00000546229 NR0B1P51843 470 aaKnown RBP11.76□□□□□ -0.53
COPS7A-221ENST00000546229 MLF1P58340 268 aa11.76□□□□□ -0.53
COPS7A-221ENST00000546229 OLR1P78380 273 aa11.76□□□□□ -0.53
COPS7A-221ENST00000546229 REEP5Q00765 189 aa11.76□□□□□ -0.53
COPS7A-221ENST00000546229 TFF3Q07654 80 aa11.76□□□□□ -0.53
COPS7A-221ENST00000546229 PWP1Q13610 501 aa11.76□□□□□ -0.53
COPS7A-221ENST00000546229 THOC5Q13769 683 aaKnown RBP11.76□□□□□ -0.53
COPS7A-221ENST00000546229 HERC3Q15034 1050 aa11.76□□□□□ -0.53
COPS7A-221ENST00000546229 DEFB134Q4QY38 66 aa11.76□□□□□ -0.53
COPS7A-221ENST00000546229 MSS51Q4VC12 460 aa11.76□□□□□ -0.53
COPS7A-221ENST00000546229 RNASEH2BQ5TBB1 312 aaKnown RBP11.76□□□□□ -0.53
COPS7A-221ENST00000546229 SLC25A25Q6KCM7 469 aa11.76□□□□□ -0.53
COPS7A-221ENST00000546229 LRRC8EQ6NSJ5 796 aa11.76□□□□□ -0.53
COPS7A-221ENST00000546229 UGT3A1Q6NUS8 523 aa11.76□□□□□ -0.53
COPS7A-221ENST00000546229 SBSNQ6UWP8 590 aa11.76□□□□□ -0.53
COPS7A-221ENST00000546229 GALNT7Q86SF2 657 aa11.76□□□□□ -0.53
COPS7A-221ENST00000546229 SLC5A8Q8N695 610 aa11.76□□□□□ -0.53
COPS7A-221ENST00000546229 ANKRD53Q8N9V6 530 aa11.76□□□□□ -0.53
COPS7A-221ENST00000546229 TMEM178AQ8NBL3 297 aa11.76□□□□□ -0.53
COPS7A-221ENST00000546229 TRIM58Q8NG06 486 aa11.76□□□□□ -0.53
COPS7A-221ENST00000546229 UTP15Q8TED0 518 aaKnown RBP11.76□□□□□ -0.53
COPS7A-221ENST00000546229 PYCR2Q96C36 320 aa11.76□□□□□ -0.53
COPS7A-221ENST00000546229 MS4A14Q96JA4 679 aa11.76□□□□□ -0.53
COPS7A-221ENST00000546229 FAM167BQ9BTA0 163 aa11.76□□□□□ -0.53
COPS7A-221ENST00000546229 SLC6A16Q9GZN6 736 aa11.76□□□□□ -0.53
COPS7A-221ENST00000546229 LZTFL1Q9NQ48 299 aa11.76□□□□□ -0.53
COPS7A-221ENST00000546229 LRFN1Q9P244 771 aa11.76□□□□□ -0.53
COPS7A-221ENST00000546229 TRMT6Q9UJA5 497 aaKnown RBP11.76□□□□□ -0.53
COPS7A-221ENST00000546229 E9PLN8 166 aa11.75□□□□□ -0.53
COPS7A-221ENST00000546229 CHST10O43529 356 aa11.75□□□□□ -0.53
COPS7A-221ENST00000546229 BANF1O75531 89 aa11.75□□□□□ -0.53
COPS7A-221ENST00000546229 TBX6O95947 436 aaPredicted RBP11.75□□□□□ -0.53
COPS7A-221ENST00000546229 ZNF888P0CJ79 500 aaPredicted RBP11.75□□□□□ -0.53
COPS7A-221ENST00000546229 CD46P15529 392 aa11.75□□□□□ -0.53
COPS7A-221ENST00000546229 ALOX12P18054 663 aa11.75□□□□□ -0.53
COPS7A-221ENST00000546229 SSTR2P30874 369 aa11.75□□□□□ -0.53
COPS7A-221ENST00000546229 SMSP52788 366 aa11.75□□□□□ -0.53
COPS7A-221ENST00000546229 OR4D2P58180 307 aa11.75□□□□□ -0.53
COPS7A-221ENST00000546229 BTG2P78543 158 aa11.75□□□□□ -0.53
COPS7A-221ENST00000546229 SARNPP82979 210 aaKnown RBP11.75□□□□□ -0.53
COPS7A-221ENST00000546229 CCZ1BP86790 482 aa11.75□□□□□ -0.53
COPS7A-221ENST00000546229 CCZ1P86791 482 aaPredicted RBP11.75□□□□□ -0.53
COPS7A-221ENST00000546229 CMPK2Q5EBM0 449 aa11.75□□□□□ -0.53
COPS7A-221ENST00000546229 CATSPEREQ5SY80 951 aa11.75□□□□□ -0.53
COPS7A-221ENST00000546229 SPNS3Q6ZMD2 512 aa11.75□□□□□ -0.53
COPS7A-221ENST00000546229 RPS19BP1Q86WX3 136 aaKnown RBP11.75□□□□□ -0.53
COPS7A-221ENST00000546229 IGDCC3Q8IVU1 814 aa11.75□□□□□ -0.53
COPS7A-221ENST00000546229 GHDCQ8N2G8 530 aa11.75□□□□□ -0.53
COPS7A-221ENST00000546229 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.75□□□□□ -0.53
COPS7A-221ENST00000546229 CALML6Q8TD86 181 aa11.75□□□□□ -0.53
COPS7A-221ENST00000546229 MCOLN3Q8TDD5 553 aa11.75□□□□□ -0.53
COPS7A-221ENST00000546229 NEIL2Q969S2 332 aa11.75□□□□□ -0.53
COPS7A-221ENST00000546229 FBXL8Q96CD0 374 aa11.75□□□□□ -0.53
COPS7A-221ENST00000546229 LINGO1Q96FE5 620 aa11.75□□□□□ -0.53
COPS7A-221ENST00000546229 VKORC1Q9BQB6 163 aa11.75□□□□□ -0.53
COPS7A-221ENST00000546229 CCDC68Q9H2F9 335 aa11.75□□□□□ -0.53
COPS7A-221ENST00000546229 CDCP1Q9H5V8 836 aa11.75□□□□□ -0.53
COPS7A-221ENST00000546229 NECTIN3Q9NQS3 549 aa11.75□□□□□ -0.53
COPS7A-221ENST00000546229 NPDC1Q9NQX5 325 aaPredicted RBP11.75□□□□□ -0.53
COPS7A-221ENST00000546229 IARS2Q9NSE4 1012 aaKnown RBP11.75□□□□□ -0.53
COPS7A-221ENST00000546229 PPIEQ9UNP9 301 aaKnown RBP11.75□□□□□ -0.53
COPS7A-221ENST00000546229 SPG11Q96JI7 2443 aa11.74□□□□□ -0.53
COPS7A-221ENST00000546229 TMEM200CA6NKL6 621 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms