RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 ANGPTL8Q6UXH0 198 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 GDPGP1Q6ZNW5 385 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 UBE2R2Q712K3 238 aaPredicted RBP13.66□□□□□ -0.22
SRP54-202ENST00000546080 C16orf59Q7L2K0 433 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 CACTIN-AS1Q8N1I8 211 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 L3MBTL4Q8NA19 623 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 ANGPTL6Q8NI99 470 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 FCRL1Q96LA6 429 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 FRMD6Q96NE9 622 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 FAM129BQ96TA1 746 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 HTATIP2Q9BUP3 242 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 GON7Q9BXV9 100 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 KCTD5Q9NXV2 234 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 ENOPH1Q9UHY7 261 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 SLC35F4A4IF30 521 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 A8MVJ9 347 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 TRBC1P01850 177 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 SLC10A3P09131 477 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 CBSLP0DN79 551 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 PSMA1P25786 263 aaKnown RBP13.66□□□□□ -0.22
SRP54-202ENST00000546080 CBSP35520 551 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 RHOAP61586 193 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 GPLD1P80108 840 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 BNC1Q01954 994 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 RHAGQ02094 409 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 CTXN3Q4LDR2 81 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 CEP78Q5JTW2 689 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 CDKL4Q5MAI5 379 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 ARMC12Q5T9G4 340 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 DENND1CQ8IV53 801 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 ADGRG2Q8IZP9 1017 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 RDH10Q8IZV5 341 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 MAPKAP1Q9BPZ7 522 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 ZFYVE1Q9HBF4 777 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 LHX3Q9UBR4 397 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 SEC14L4Q9UDX3 406 aa13.66□□□□□ -0.22
SRP54-202ENST00000546080 A0A1W2PQ67 120 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 OR6C70A6NIJ9 312 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 B4DXG7 233 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 ICMTO60725 284 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 CPNE3O75131 537 aaKnown RBP13.65□□□□□ -0.22
SRP54-202ENST00000546080 GCM2O75603 506 aaPredicted RBP13.65□□□□□ -0.22
SRP54-202ENST00000546080 ALPPP05187 535 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 OR1G1P47890 313 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 IRF5Q13568 498 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 PTCHD3Q3KNS1 767 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 PDZK1Q5T2W1 519 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 ATXN7L2Q5T6C5 722 aaPredicted RBP13.65□□□□□ -0.22
SRP54-202ENST00000546080 LYPD8Q6UX82 237 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 ZNF280BQ86YH2 543 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 PEX5LQ8IYB4 626 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 NAGSQ8N159 534 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 VPS37AQ8NEZ2 397 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 SKA2Q8WVK7 121 aaPredicted RBP13.65□□□□□ -0.22
SRP54-202ENST00000546080 SPATA17Q96L03 361 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 VPS35Q96QK1 796 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 C11orf54Q9H0W9 315 aaPredicted RBP13.65□□□□□ -0.22
SRP54-202ENST00000546080 TMEM245Q9H330 911 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 RNF121Q9H920 327 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 IL26Q9NPH9 171 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 PRG3Q9Y2Y8 225 aaPredicted RBP13.65□□□□□ -0.22
SRP54-202ENST00000546080 TRBV5-4A0A0C4DH59 114 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 GLYATL1P3A0A0U1RQE8 302 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 IQCMA0A1B0GVH7 501 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 C1orf226A1L170 272 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 SERTM1A2A2V5 107 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 ZNF670-ZNF695F2Z2N8 137 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 J3KTA2 159 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 SCAMP2O15127 329 aaKnown RBP13.65□□□□□ -0.22
SRP54-202ENST00000546080 CD160O95971 181 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 IGHA2P01877 340 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 HIST1H2AGP0C0S8 130 aaPredicted RBP13.65□□□□□ -0.22
SRP54-202ENST00000546080 PIPP12273 146 aaPredicted RBP13.65□□□□□ -0.22
SRP54-202ENST00000546080 CKMT1AP12532 417 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 HIST1H2ADP20671 130 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 AOAHP28039 575 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 CSTF2P33240 577 aaKnown RBP eCLIP13.65□□□□□ -0.22
SRP54-202ENST00000546080 THPOP40225 353 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 IL12RB1P42701 662 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 CRATP43155 626 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 PCDH1Q08174 1060 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 GAB1Q13480 694 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 CHRNA6Q15825 494 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 ZXDCQ2QGD7 858 aaPredicted RBP13.65□□□□□ -0.22
SRP54-202ENST00000546080 NPAS3Q8IXF0 933 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 FAM181AQ8N9Y4 354 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 ZFAND1Q8TCF1 268 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 HCAR2Q8TDS4 363 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 HIST1H2AHQ96KK5 128 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 CITED4Q96RK1 184 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 HIST1H2AJQ99878 128 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 TCF25Q9BQ70 676 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 H2AFJQ9BTM1 129 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 TTLL2Q9BWV7 592 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 BTNL2Q9UIR0 455 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 DNMT3LQ9UJW3 386 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 STUB1Q9UNE7 303 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 MAPRE3Q9UPY8 281 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 RUVBL1Q9Y265 456 aaKnown RBP13.65□□□□□ -0.22
SRP54-202ENST00000546080 SLC22A14Q9Y267 594 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms