RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 MTERF3Q96E29 417 aa6.24□□□□□ -1.41
SNHG1-225ENST00000545920 PPP1R16AQ96I34 528 aa6.24□□□□□ -1.41
SNHG1-225ENST00000545920 Q96MT0 163 aa6.24□□□□□ -1.41
SNHG1-225ENST00000545920 FAM83CQ9BQN1 747 aa6.24□□□□□ -1.41
SNHG1-225ENST00000545920 TBCDQ9BTW9 1192 aa6.24□□□□□ -1.41
SNHG1-225ENST00000545920 DOHHQ9BU89 302 aa6.24□□□□□ -1.41
SNHG1-225ENST00000545920 TRIM8Q9BZR9 551 aa6.24□□□□□ -1.41
SNHG1-225ENST00000545920 IKZF5Q9H5V7 419 aa6.24□□□□□ -1.41
SNHG1-225ENST00000545920 TMEM38AQ9H6F2 299 aa6.24□□□□□ -1.41
SNHG1-225ENST00000545920 ASB8Q9H765 288 aa6.24□□□□□ -1.41
SNHG1-225ENST00000545920 ZNF556Q9HAH1 456 aa6.24□□□□□ -1.41
SNHG1-225ENST00000545920 DYRK4Q9NR20 520 aa6.24□□□□□ -1.41
SNHG1-225ENST00000545920 ELOVL2Q9NXB9 296 aa6.24□□□□□ -1.41
SNHG1-225ENST00000545920 THUMPD1Q9NXG2 353 aaKnown RBP6.24□□□□□ -1.41
SNHG1-225ENST00000545920 GPRC5BQ9NZH0 403 aa6.24□□□□□ -1.41
SNHG1-225ENST00000545920 TRPM5Q9NZQ8 1165 aa6.24□□□□□ -1.41
SNHG1-225ENST00000545920 NFKBIL1Q9UBC1 381 aaPredicted RBP6.24□□□□□ -1.41
SNHG1-225ENST00000545920 ZMYM5Q9UJ78 669 aa6.24□□□□□ -1.41
SNHG1-225ENST00000545920 STUB1Q9UNE7 303 aa6.24□□□□□ -1.41
SNHG1-225ENST00000545920 TSC22D4Q9Y3Q8 395 aa6.24□□□□□ -1.41
SNHG1-225ENST00000545920 ZNF451Q9Y4E5 1061 aa6.24□□□□□ -1.41
SNHG1-225ENST00000545920 ASB1Q9Y576 335 aa6.24□□□□□ -1.41
SNHG1-225ENST00000545920 PCDHGA3Q9Y5H0 932 aa6.24□□□□□ -1.41
SNHG1-225ENST00000545920 MAGED1Q9Y5V3 778 aaPredicted RBP6.24□□□□□ -1.41
SNHG1-225ENST00000545920 LYVE1Q9Y5Y7 322 aa6.24□□□□□ -1.41
SNHG1-225ENST00000545920 DGKBQ9Y6T7 804 aa6.24□□□□□ -1.41
SNHG1-225ENST00000545920 ZNF638Q14966 1978 aaKnown RBP6.24□□□□□ -1.41
SNHG1-225ENST00000545920 IRGMA1A4Y4 181 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 ZNF840PA6NDX5 716 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 GLTPD2A6NH11 291 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 UPK3BL1B0FP48 263 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 FAM47E-STBD1D6RA91 191 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 UPK3BL2E5RIL1 263 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 H0YIV9 168 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 GFYI3L273 518 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 CBX4O00257 560 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 RNASET2O00584 256 aaKnown RBP6.23□□□□□ -1.41
SNHG1-225ENST00000545920 SCN2BO60939 215 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 AOC2O75106 756 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 ADAMTS4O75173 837 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 TRIM3O75382 744 aaPredicted RBP6.23□□□□□ -1.41
SNHG1-225ENST00000545920 WBP4O75554 376 aaKnown RBP6.23□□□□□ -1.41
SNHG1-225ENST00000545920 UGT2B17O75795 530 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 STC2O76061 302 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 ZNF682O95780 498 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 FADS2O95864 444 aaKnown RBP6.23□□□□□ -1.41
SNHG1-225ENST00000545920 TBX18O95935 607 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 IGSF6O95976 241 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 PDYNP01213 254 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 KRT8P05787 483 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 GSTM1P09488 218 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 OR4Q2P0C623 313 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 PRSS56P0CW18 603 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 ENGP17813 658 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 SDC1P18827 310 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 ENDOUP21128 410 aaKnown RBP6.23□□□□□ -1.41
SNHG1-225ENST00000545920 PTBP1P26599 531 aaKnown RBP eCLIP6.23□□□□□ -1.41
SNHG1-225ENST00000545920 AOAHP28039 575 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 SERPINA4P29622 427 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 CORO1AP31146 461 aaKnown RBP6.23□□□□□ -1.41
SNHG1-225ENST00000545920 HOXA9P31269 272 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 FMO3P31513 532 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 GRK4P32298 578 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 GPR15P49685 360 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 CDKN1CP49918 316 aaPredicted RBP6.23□□□□□ -1.41
SNHG1-225ENST00000545920 KCNQ1P51787 676 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 NEK2P51955 445 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 HMGA2P52926 109 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 UGT2B15P54855 530 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 CDC42P60953 191 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 VBP1P61758 197 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 SELENOWP63302 87 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 ARF5P84085 180 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 HMGCS1Q01581 520 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 RHAGQ02094 409 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 CACNB2Q08289 660 aaPredicted RBP6.23□□□□□ -1.41
SNHG1-225ENST00000545920 TWF1Q12792 350 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 ARHGEF7Q14155 803 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 SIM2Q14190 667 aaPredicted RBP6.23□□□□□ -1.41
SNHG1-225ENST00000545920 E2F2Q14209 437 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 KCNJ8Q15842 424 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 ZNF630Q2M218 657 aaPredicted RBP6.23□□□□□ -1.41
SNHG1-225ENST00000545920 INAVAQ3KP66 663 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 IQCCQ4KMZ1 466 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 IFI44LQ53G44 452 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 CARD16Q5EG05 197 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 CLLU1OSQ5K130 101 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 FAM171A1Q5VUB5 890 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 TPGS2Q68CL5 300 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 SLC8B1Q6J4K2 584 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 KIAA1841Q6NSI8 718 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 NOXRED1Q6NXP6 359 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 ERAP2Q6P179 960 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 CXCL17Q6UXB2 119 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 UNC5DQ6UXZ4 953 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 C20orf204Q6ZNR8 217 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 TPGS1Q6ZTW0 290 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 TPRG1Q6ZUI0 275 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 USP45Q70EL2 814 aa6.23□□□□□ -1.41
SNHG1-225ENST00000545920 CIR1Q86X95 450 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms