RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, human

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-223	ENST00000545440	SVIL	O95425	2214 aa		7.32	□□□□□ -1.24
SNHG1-223	ENST00000545440	LOC105369274	A0A096LPK9	316 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	LOC102723532	A0A0G2JNH3	316 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	HYKK	A2RU49	373 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	EFCAB8	A8MWE9	144 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440		K7EM74	188 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	PEX12	O00623	359 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	AQP7	O14520	342 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	TXNDC9	O14530	226 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	SLC16A5	O15375	505 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	KLHL41	O60662	606 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	CNOT3	O75175	753 aa	Known RBP	7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	SYF2	O95926	243 aa	Known RBP	7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	SCG5	P05408	212 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	UMOD	P07911	640 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	FDXR	P22570	491 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	MMP11	P24347	488 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	CCND1	P24385	295 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	HRH2	P25021	359 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	RPL21	P46778	160 aa	Known RBP	7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	CARS	P49589	748 aa	Known RBP	7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	TBPL1	P62380	186 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	YBX1	P67809	324 aa	Known RBP	7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	TIAL1	Q01085	375 aa	Known RBP eCLIP	7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	TSTA3	Q13630	321 aa	Predicted RBP	7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	MUM1	Q2TAK8	710 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	PRTG	Q2VWP7	1150 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	DCAF10	Q5QP82	559 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	TEDDM1	Q5T9Z0	273 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	FRMPD2B	Q6IN97	320 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	FAM45BP	Q6NSW5	357 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	TRMT10B	Q6PF06	316 aa	Known RBP	7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	UBE2R2	Q712K3	238 aa	Predicted RBP	7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	COX15	Q7KZN9	410 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	OVCH1	Q7RTY7	1134 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	MAMDC2	Q7Z304	686 aa	Predicted RBP	7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	PPP1R32	Q7Z5V6	425 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	PAQR7	Q86WK9	346 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	OR4N4	Q8N0Y3	316 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	MYO1H	Q8N1T3	1032 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	CLEC1A	Q8NC01	280 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	PPFIBP2	Q8ND30	876 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	FAM45A	Q8TCE6	357 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	MCOLN3	Q8TDD5	553 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	LINGO1	Q96FE5	620 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	CFAP36	Q96G28	342 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	C10orf90	Q96M02	699 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	CCDC138	Q96M89	665 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	KRT12	Q99456	494 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	PCBD2	Q9H0N5	130 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	PARVB	Q9HBI1	364 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	PPAN	Q9NQ55	473 aa	Known RBP	7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	CCDC177	Q9NQR7	707 aa	Predicted RBP	7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	P4HTM	Q9NXG6	502 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	GPR83	Q9NYM4	423 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	STOX2	Q9P2F5	926 aa	Predicted RBP	7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	SLC17A6	Q9P2U8	582 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	CTSF	Q9UBX1	484 aa		7.31	□□□□□ -1.24
SNHG1-223	ENST00000545440	IGLV3-12	A0A075B6K2	115 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	VSTM2B	A6NLU5	285 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440		H0YGG7	62 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	PYCARD-AS1	I3L0S3	204 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	AGPS	O00116	658 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	PRPF4	O43172	522 aa	Known RBP eCLIP	7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	TBX1	O43435	398 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	DPM1	O60762	260 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	TSPAN12	O95859	305 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	AHSG	P02765	367 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	ALPP	P05187	535 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	ENO2	P09104	434 aa	Predicted RBP	7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	ZNF37A	P17032	561 aa	Predicted RBP	7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	SSTR4	P31391	388 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	CCL11	P51671	97 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	CDKN2D	P55273	166 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	AP1S2	P56377	157 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	IL2	P60568	153 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	ARF3	P61204	181 aa	Predicted RBP	7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	MGAT5	Q09328	741 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	ILF2	Q12905	390 aa	Known RBP	7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	PDIA2	Q13087	525 aa	Known RBP	7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	FASTKD3	Q14CZ7	662 aa	Known RBP	7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	THEMIS2	Q5TEJ8	643 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	VWA5B1	Q5TIE3	1220 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	HECTD2	Q5U5R9	776 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	GARNL3	Q5VVW2	1013 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	PAQR3	Q6TCH7	311 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	SLC26A11	Q86WA9	606 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	SPPL2C	Q8IUH8	684 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	PALM2	Q8IXS6	379 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	CSNK1A1L	Q8N752	337 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	GPATCH11	Q8N954	259 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	TEX19	Q8NA77	164 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	FBXO36	Q8NEA4	188 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	SPATA4	Q8NEY3	305 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	FDCSP	Q8NFU4	85 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	EEF1AKMT1	Q8WVE0	214 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	DIO2	Q92813	273 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	RERG	Q96A58	199 aa	Predicted RBP	7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	VPS50	Q96JG6	964 aa		7.3	□□□□□ -1.24
SNHG1-223	ENST00000545440	CABS1	Q96KC9	395 aa		7.3	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 20 ms