RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 C5AR2Q9P296 337 aa11.87□□□□□ -0.51
ACTN1-206ENST00000544964 OPTCQ9UBM4 332 aa11.87□□□□□ -0.51
ACTN1-206ENST00000544964 TMCO1Q9UM00 188 aa11.87□□□□□ -0.51
ACTN1-206ENST00000544964 ACTL7BQ9Y614 415 aa11.87□□□□□ -0.51
ACTN1-206ENST00000544964 ZGRF1Q86YA3 2104 aa11.86□□□□□ -0.51
ACTN1-206ENST00000544964 STX16-NPEPL1H3BU86 382 aa11.86□□□□□ -0.51
ACTN1-206ENST00000544964 STX16O14662 325 aa11.86□□□□□ -0.51
ACTN1-206ENST00000544964 FKBP9O95302 570 aa11.86□□□□□ -0.51
ACTN1-206ENST00000544964 ATXN8OSP0DMR3 200 aa11.86□□□□□ -0.51
ACTN1-206ENST00000544964 CPA3P15088 417 aa11.86□□□□□ -0.51
ACTN1-206ENST00000544964 ATP5F1P24539 256 aaPredicted RBP11.86□□□□□ -0.51
ACTN1-206ENST00000544964 ABATP80404 500 aa11.86□□□□□ -0.51
ACTN1-206ENST00000544964 CDC16Q13042 620 aa11.86□□□□□ -0.51
ACTN1-206ENST00000544964 MPP2Q14168 576 aa11.86□□□□□ -0.51
ACTN1-206ENST00000544964 SSPNQ14714 243 aa11.86□□□□□ -0.51
ACTN1-206ENST00000544964 PCBP2Q15366 365 aaKnown RBP eCLIP11.86□□□□□ -0.512e-6■■■■□ 23.1
ACTN1-206ENST00000544964 PDK4Q16654 411 aa11.86□□□□□ -0.51
ACTN1-206ENST00000544964 PLEKHN1Q494U1 663 aaPredicted RBP11.86□□□□□ -0.51
ACTN1-206ENST00000544964 NKAIN1Q4KMZ8 207 aa11.86□□□□□ -0.51
ACTN1-206ENST00000544964 C4orf17Q53FE4 359 aa11.86□□□□□ -0.51
ACTN1-206ENST00000544964 CATSPEREQ5SY80 951 aa11.86□□□□□ -0.51
ACTN1-206ENST00000544964 TLDC1Q6P9B6 456 aa11.86□□□□□ -0.51
ACTN1-206ENST00000544964 IGFL3Q6UXB1 125 aa11.86□□□□□ -0.51
ACTN1-206ENST00000544964 RPS27LQ71UM5 84 aaKnown RBP11.86□□□□□ -0.51
ACTN1-206ENST00000544964 COX15Q7KZN9 410 aa11.86□□□□□ -0.51
ACTN1-206ENST00000544964 LRRC70Q7Z2Q7 622 aa11.86□□□□□ -0.51
ACTN1-206ENST00000544964 ADCK2Q7Z695 626 aa11.86□□□□□ -0.51
ACTN1-206ENST00000544964 C17orf64Q86WR6 236 aa11.86□□□□□ -0.51
ACTN1-206ENST00000544964 PLD3Q8IV08 490 aa11.86□□□□□ -0.51
ACTN1-206ENST00000544964 GALNT16Q8N428 558 aa11.86□□□□□ -0.51
ACTN1-206ENST00000544964 TEX9Q8N6V9 391 aa11.86□□□□□ -0.51
ACTN1-206ENST00000544964 GOLGA6L1Q8N7Z2 621 aa11.86□□□□□ -0.51
ACTN1-206ENST00000544964 SLC5A11Q8WWX8 675 aa11.86□□□□□ -0.51
ACTN1-206ENST00000544964 NEIL2Q969S2 332 aa11.86□□□□□ -0.51
ACTN1-206ENST00000544964 SNRNP40Q96DI7 357 aaKnown RBP11.86□□□□□ -0.51
ACTN1-206ENST00000544964 ATP6V1G3Q96LB4 118 aa11.86□□□□□ -0.51
ACTN1-206ENST00000544964 SH3GL2Q99962 352 aa11.86□□□□□ -0.51
ACTN1-206ENST00000544964 ZNF552Q9H707 407 aaPredicted RBP11.86□□□□□ -0.51
ACTN1-206ENST00000544964 SSU72Q9NP77 194 aaKnown RBP11.86□□□□□ -0.51
ACTN1-206ENST00000544964 IFT80Q9P2H3 777 aaPredicted RBP11.86□□□□□ -0.51
ACTN1-206ENST00000544964 NDOR1Q9UHB4 597 aa11.86□□□□□ -0.51
ACTN1-206ENST00000544964 PLCL2Q9UPR0 1127 aa11.86□□□□□ -0.51
ACTN1-206ENST00000544964 ANGPTL3Q9Y5C1 460 aa11.86□□□□□ -0.51
ACTN1-206ENST00000544964 KCNE2Q9Y6J6 123 aa11.86□□□□□ -0.51
ACTN1-206ENST00000544964 HEATR5BQ9P2D3 2071 aa11.86□□□□□ -0.51
ACTN1-206ENST00000544964 K7EPI3 171 aa11.85□□□□□ -0.51
ACTN1-206ENST00000544964 HAT1O14929 419 aa11.85□□□□□ -0.51
ACTN1-206ENST00000544964 CTSVO60911 334 aa11.85□□□□□ -0.51
ACTN1-206ENST00000544964 EPORP19235 508 aa11.85□□□□□ -0.51
ACTN1-206ENST00000544964 VARSP26640 1264 aaKnown RBP11.85□□□□□ -0.51
ACTN1-206ENST00000544964 CSNK1G2P78368 415 aa11.85□□□□□ -0.51
ACTN1-206ENST00000544964 MEF2AQ02078 507 aaPredicted RBP11.85□□□□□ -0.51
ACTN1-206ENST00000544964 PCLAFQ15004 111 aa11.85□□□□□ -0.51
ACTN1-206ENST00000544964 NR6A1Q15406 480 aa11.85□□□□□ -0.51
ACTN1-206ENST00000544964 EIF2S3LQ2VIR3 472 aaKnown RBP11.85□□□□□ -0.51
ACTN1-206ENST00000544964 CRB2Q5IJ48 1285 aa11.85□□□□□ -0.51
ACTN1-206ENST00000544964 ZNF425Q6IV72 752 aa11.85□□□□□ -0.51
ACTN1-206ENST00000544964 GOLGA7Q7Z5G4 137 aa11.85□□□□□ -0.51
ACTN1-206ENST00000544964 TMPRSS11BQ86T26 416 aa11.85□□□□□ -0.51
ACTN1-206ENST00000544964 PAQR7Q86WK9 346 aa11.85□□□□□ -0.51
ACTN1-206ENST00000544964 C10orf107Q8IVU9 208 aa11.85□□□□□ -0.51
ACTN1-206ENST00000544964 ANKRD42Q8N9B4 389 aa11.85□□□□□ -0.51
ACTN1-206ENST00000544964 CLEC1AQ8NC01 280 aa11.85□□□□□ -0.51
ACTN1-206ENST00000544964 RDH11Q8TC12 318 aa11.85□□□□□ -0.51
ACTN1-206ENST00000544964 ZUFSPQ96AP4 578 aa11.85□□□□□ -0.51
ACTN1-206ENST00000544964 FKBP10Q96AY3 582 aa11.85□□□□□ -0.51
ACTN1-206ENST00000544964 FER1L6-AS2Q96M78 137 aa11.85□□□□□ -0.51
ACTN1-206ENST00000544964 NSUN5Q96P11 429 aaKnown RBP11.85□□□□□ -0.51
ACTN1-206ENST00000544964 TMEM237Q96Q45 408 aa11.85□□□□□ -0.51
ACTN1-206ENST00000544964 SPSB2Q99619 263 aa11.85□□□□□ -0.51
ACTN1-206ENST00000544964 PLCD4Q9BRC7 762 aa11.85□□□□□ -0.51
ACTN1-206ENST00000544964 SLC29A3Q9BZD2 475 aa11.85□□□□□ -0.51
ACTN1-206ENST00000544964 SPNS1Q9H2V7 528 aa11.85□□□□□ -0.51
ACTN1-206ENST00000544964 ACBD3Q9H3P7 528 aa11.85□□□□□ -0.51
ACTN1-206ENST00000544964 ZBTB20Q9HC78 741 aaPredicted RBP11.85□□□□□ -0.51
ACTN1-206ENST00000544964 ENAMQ9NRM1 1142 aa11.85□□□□□ -0.51
ACTN1-206ENST00000544964 TXLNGQ9NUQ3 528 aa11.85□□□□□ -0.51
ACTN1-206ENST00000544964 ASF1BQ9NVP2 202 aa11.85□□□□□ -0.51
ACTN1-206ENST00000544964 COPG2Q9UBF2 871 aa11.85□□□□□ -0.51
ACTN1-206ENST00000544964 GPN3Q9UHW5 284 aaPredicted RBP11.85□□□□□ -0.51
ACTN1-206ENST00000544964 PCTPQ9UKL6 214 aa11.85□□□□□ -0.51
ACTN1-206ENST00000544964 B3GNT3Q9Y2A9 372 aa11.85□□□□□ -0.51
ACTN1-206ENST00000544964 NTNG1Q9Y2I2 539 aa11.85□□□□□ -0.51
ACTN1-206ENST00000544964 TNPO3Q9Y5L0 923 aaKnown RBP11.85□□□□□ -0.51
ACTN1-206ENST00000544964 CSAG2Q9Y5P2 127 aa11.85□□□□□ -0.51
ACTN1-206ENST00000544964 A0A0J9YVX5 310 aa11.84□□□□□ -0.51
ACTN1-206ENST00000544964 A0A1B0GX78 115 aa11.84□□□□□ -0.51
ACTN1-206ENST00000544964 FEZF1A0PJY2 475 aa11.84□□□□□ -0.51
ACTN1-206ENST00000544964 TMEM120BA0PK00 339 aa11.84□□□□□ -0.51
ACTN1-206ENST00000544964 A1L4Q6 167 aa11.84□□□□□ -0.51
ACTN1-206ENST00000544964 OR2A25A4D2G3 310 aa11.84□□□□□ -0.51
ACTN1-206ENST00000544964 E2F3O00716 465 aa11.84□□□□□ -0.51
ACTN1-206ENST00000544964 CLGNO14967 610 aa11.84□□□□□ -0.51
ACTN1-206ENST00000544964 PRPF4O43172 522 aaKnown RBP eCLIP11.84□□□□□ -0.51
ACTN1-206ENST00000544964 PRAMEF4O60810 478 aa11.84□□□□□ -0.51
ACTN1-206ENST00000544964 ALOX12BO75342 701 aa11.84□□□□□ -0.51
ACTN1-206ENST00000544964 SUPT7LO94864 414 aa11.84□□□□□ -0.51
ACTN1-206ENST00000544964 ONECUT2O95948 504 aa11.84□□□□□ -0.51
ACTN1-206ENST00000544964 RPS17P08708 135 aaKnown RBP11.84□□□□□ -0.51
ACTN1-206ENST00000544964 EPB42P16452 691 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms