RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 LOXL4Q96JB6 756 aa29.03■■■□□ 2.24
CCM2-219ENST00000544363 RAB33BQ9H082 229 aa29.03■■■□□ 2.24
CCM2-219ENST00000544363 LHX9Q9NQ69 397 aa29.03■■■□□ 2.24
CCM2-219ENST00000544363 GID8Q9NWU2 228 aa29.03■■■□□ 2.24
CCM2-219ENST00000544363 ADAM29Q9UKF5 820 aa29.03■■■□□ 2.24
CCM2-219ENST00000544363 CROTQ9UKG9 612 aa29.03■■■□□ 2.24
CCM2-219ENST00000544363 PADI4Q9UM07 663 aa29.03■■■□□ 2.24
CCM2-219ENST00000544363 ADAMTS9Q9P2N4 1935 aa29.02■■■□□ 2.24
CCM2-219ENST00000544363 A0A088AWK7 358 aa29.02■■■□□ 2.24
CCM2-219ENST00000544363 TRIM38O00635 465 aa29.02■■■□□ 2.24
CCM2-219ENST00000544363 CAPN5O15484 640 aaPredicted RBP29.02■■■□□ 2.24
CCM2-219ENST00000544363 PRAMEF10O60809 474 aa29.02■■■□□ 2.24
CCM2-219ENST00000544363 SYPP08247 313 aa29.02■■■□□ 2.24
CCM2-219ENST00000544363 ST6GAL1P15907 406 aa29.02■■■□□ 2.24
CCM2-219ENST00000544363 PPM1FP49593 454 aaPredicted RBP29.02■■■□□ 2.24
CCM2-219ENST00000544363 ARFIP1P53367 373 aa29.02■■■□□ 2.24
CCM2-219ENST00000544363 PSME3P61289 254 aa29.02■■■□□ 2.24
CCM2-219ENST00000544363 PWP1Q13610 501 aa29.02■■■□□ 2.24
CCM2-219ENST00000544363 NR1D2Q14995 579 aa29.02■■■□□ 2.24
CCM2-219ENST00000544363 DPY19L1Q2PZI1 675 aa29.02■■■□□ 2.24
CCM2-219ENST00000544363 TOR1AIP1Q5JTV8 583 aa29.02■■■□□ 2.24
CCM2-219ENST00000544363 CCNYL2Q5T2Q4 361 aa29.02■■■□□ 2.24
CCM2-219ENST00000544363 OR4C11Q6IEV9 310 aa29.02■■■□□ 2.24
CCM2-219ENST00000544363 NUDT13Q86X67 352 aa29.02■■■□□ 2.24
CCM2-219ENST00000544363 SCUBE1Q8IWY4 988 aa29.02■■■□□ 2.24
CCM2-219ENST00000544363 DPP10Q8N608 796 aa29.02■■■□□ 2.24
CCM2-219ENST00000544363 TRAPPC9Q96Q05 1148 aa29.02■■■□□ 2.24
CCM2-219ENST00000544363 SLC6A16Q9GZN6 736 aa29.02■■■□□ 2.24
CCM2-219ENST00000544363 MYNNQ9NPC7 610 aa29.02■■■□□ 2.24
CCM2-219ENST00000544363 C1GALT1Q9NS00 363 aa29.02■■■□□ 2.24
CCM2-219ENST00000544363 EPHA6Q9UF33 1036 aa29.02■■■□□ 2.24
CCM2-219ENST00000544363 PRPF19Q9UMS4 504 aaKnown RBP29.02■■■□□ 2.24
CCM2-219ENST00000544363 PCDHGA7Q9Y5G6 932 aa29.02■■■□□ 2.24
CCM2-219ENST00000544363 GOLGA4Q13439 2230 aaKnown RBP29.02■■■□□ 2.24
CCM2-219ENST00000544363 EPN2O95208 641 aa29.02■■■□□ 2.24
CCM2-219ENST00000544363 S100A3P33764 101 aa29.02■■■□□ 2.24
CCM2-219ENST00000544363 OR1D5P58170 312 aa29.02■■■□□ 2.24
CCM2-219ENST00000544363 STXBP1P61764 594 aaKnown RBP29.02■■■□□ 2.24
CCM2-219ENST00000544363 RGS1Q08116 209 aa29.02■■■□□ 2.24
CCM2-219ENST00000544363 UGT8Q16880 541 aa29.02■■■□□ 2.24
CCM2-219ENST00000544363 C8orf82Q6P1X6 216 aaPredicted RBP29.02■■■□□ 2.24
CCM2-219ENST00000544363 SLC2A7Q6PXP3 512 aa29.02■■■□□ 2.24
CCM2-219ENST00000544363 ULK2Q8IYT8 1036 aa29.02■■■□□ 2.24
CCM2-219ENST00000544363 OR2L5Q8NG80 312 aa29.02■■■□□ 2.24
CCM2-219ENST00000544363 CLPTM1LQ96KA5 538 aa29.02■■■□□ 2.24
CCM2-219ENST00000544363 EPB41L1Q9H4G0 881 aa29.02■■■□□ 2.24
CCM2-219ENST00000544363 C11orf16Q9NQ32 467 aa29.02■■■□□ 2.24
CCM2-219ENST00000544363 PCDH15Q96QU1 1955 aa29.01■■■□□ 2.24
CCM2-219ENST00000544363 ARID1BQ8NFD5 2236 aaPredicted RBP29.01■■■□□ 2.24
CCM2-219ENST00000544363 PLA2G16P53816 162 aa29.01■■■□□ 2.23
CCM2-219ENST00000544363 SRSF11Q05519 484 aaKnown RBP29.01■■■□□ 2.23
CCM2-219ENST00000544363 NFYCQ13952 458 aa29.01■■■□□ 2.23
CCM2-219ENST00000544363 PGS1Q32NB8 556 aa29.01■■■□□ 2.23
CCM2-219ENST00000544363 C19orf47Q8N9M1 422 aaKnown RBP29.01■■■□□ 2.23
CCM2-219ENST00000544363 SRFBP1Q8NEF9 429 aaKnown RBP29.01■■■□□ 2.23
CCM2-219ENST00000544363 AHCYL2Q96HN2 611 aaKnown RBP29.01■■■□□ 2.23
CCM2-219ENST00000544363 OR52E6Q96RD3 313 aa29.01■■■□□ 2.23
CCM2-219ENST00000544363 MAP3K3Q99759 626 aa29.01■■■□□ 2.23
CCM2-219ENST00000544363 DDX31Q9H8H2 851 aaKnown RBP29.01■■■□□ 2.23
CCM2-219ENST00000544363 IGHV1OR21-1A0A087WYE8 117 aa29■■■□□ 2.23
CCM2-219ENST00000544363 ARHGAP10A1A4S6 786 aa29■■■□□ 2.23
CCM2-219ENST00000544363 SCAMP2O15127 329 aaKnown RBP29■■■□□ 2.23
CCM2-219ENST00000544363 ERI3O43414 337 aaKnown RBP29■■■□□ 2.23
CCM2-219ENST00000544363 SLC35G6P0C7Q6 338 aa29■■■□□ 2.23
CCM2-219ENST00000544363 MYF5P13349 255 aa29■■■□□ 2.23
CCM2-219ENST00000544363 COX7A2P14406 83 aa29■■■□□ 2.23
CCM2-219ENST00000544363 HPCAL1P37235 193 aa29■■■□□ 2.23
CCM2-219ENST00000544363 NKAIN2Q5VXU1 208 aa29■■■□□ 2.23
CCM2-219ENST00000544363 ABHD17CQ6PCB6 329 aa29■■■□□ 2.23
CCM2-219ENST00000544363 BNC2Q6ZN30 1099 aaPredicted RBP29■■■□□ 2.23
CCM2-219ENST00000544363 TMEM132CQ8N3T6 1108 aa29■■■□□ 2.23
CCM2-219ENST00000544363 OR2I1PQ8NGU4 316 aa29■■■□□ 2.23
CCM2-219ENST00000544363 NCSTNQ92542 709 aa29■■■□□ 2.23
CCM2-219ENST00000544363 LRRC58Q96CX6 371 aa29■■■□□ 2.23
CCM2-219ENST00000544363 CDRT15Q96T59 188 aa29■■■□□ 2.23
CCM2-219ENST00000544363 HOPXQ9BPY8 73 aaPredicted RBP29■■■□□ 2.23
CCM2-219ENST00000544363 C17orf62Q9BQA9 187 aa29■■■□□ 2.23
CCM2-219ENST00000544363 IL1RL2Q9HB29 575 aa29■■■□□ 2.23
CCM2-219ENST00000544363 LAMA1P25391 3075 aa29■■■□□ 2.23
CCM2-219ENST00000544363 SLC9B1P1A6NJY1 282 aa28.99■■■□□ 2.23
CCM2-219ENST00000544363 NPPAP01160 153 aa28.99■■■□□ 2.23
CCM2-219ENST00000544363 MPLP40238 635 aa28.99■■■□□ 2.23
CCM2-219ENST00000544363 TAS2R50P59544 299 aa28.99■■■□□ 2.23
CCM2-219ENST00000544363 PHC1P78364 1004 aa28.99■■■□□ 2.23
CCM2-219ENST00000544363 MAPKAPK3Q16644 382 aa28.99■■■□□ 2.23
CCM2-219ENST00000544363 TRMT5Q32P41 509 aaKnown RBP28.99■■■□□ 2.23
CCM2-219ENST00000544363 FRMPD2BQ6IN97 320 aa28.99■■■□□ 2.23
CCM2-219ENST00000544363 FAM71E1Q6IPT2 247 aa28.99■■■□□ 2.23
CCM2-219ENST00000544363 TRIM40Q6P9F5 258 aa28.99■■■□□ 2.23
CCM2-219ENST00000544363 PGM2L1Q6PCE3 622 aa28.99■■■□□ 2.23
CCM2-219ENST00000544363 FAM92BQ6ZTR7 304 aa28.99■■■□□ 2.23
CCM2-219ENST00000544363 CAMKVQ8NCB2 501 aa28.99■■■□□ 2.23
CCM2-219ENST00000544363 FAM13CQ8NE31 585 aa28.99■■■□□ 2.23
CCM2-219ENST00000544363 OR7A2PQ8NGA2 310 aa28.99■■■□□ 2.23
CCM2-219ENST00000544363 RERGQ96A58 199 aaPredicted RBP28.99■■■□□ 2.23
CCM2-219ENST00000544363 ZDHHC12Q96GR4 267 aa28.99■■■□□ 2.23
CCM2-219ENST00000544363 KCNC2Q96PR1 638 aa28.99■■■□□ 2.23
CCM2-219ENST00000544363 TEFMQ96QE5 360 aaKnown RBP28.99■■■□□ 2.23
CCM2-219ENST00000544363 GPATCH1Q9BRR8 931 aaKnown RBP28.99■■■□□ 2.23
CCM2-219ENST00000544363 ARRDC1-AS1Q9H2J1 176 aa28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms