RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 DMRT3Q9NQL9 472 aa13.77□□□□□ -0.21
TNFRSF1A-216ENST00000543995 ACSL6Q9UKU0 697 aa13.77□□□□□ -0.21
TNFRSF1A-216ENST00000543995 PADI1Q9ULC6 663 aa13.77□□□□□ -0.21
TNFRSF1A-216ENST00000543995 WDFY3Q8IZQ1 3526 aa13.77□□□□□ -0.21
TNFRSF1A-216ENST00000543995 A0A0A6YYC8 382 aaPredicted RBP13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 C1QTNF9BB2RNN3 333 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 I3L1I5 382 aaPredicted RBP13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 MANBAO00462 879 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 ERI3O43414 337 aaKnown RBP13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 ITM2AO43736 263 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 LYPLA1O75608 230 aaPredicted RBP13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 PDYNP01213 254 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 C1QTNF9P0C862 333 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 UROSP10746 265 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 LIPCP11150 499 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 ALOX12P18054 663 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 IL1RNP18510 177 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 RORAP35398 523 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 GCGRP47871 477 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 PLA2G16P53816 162 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 RAB8AP61006 207 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 DCDP81605 110 aaKnown RBP13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 TGM3Q08188 693 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 HYAL2Q12891 473 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 MAP7Q14244 749 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 HERC3Q15034 1050 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 SH2D4BQ5SQS7 431 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 CES4AQ5XG92 561 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 TRIM40Q6P9F5 258 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 UNQ6494/PRO21346Q6UXR6 183 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 CACNA2D3Q8IZS8 1091 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 DSELQ8IZU8 1212 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 DTWD1Q8N5C7 304 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 ARFGAP2Q8N6H7 521 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 IL22RA1Q8N6P7 574 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 RAB3IL1Q8TBN0 382 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 UTP15Q8TED0 518 aaKnown RBP13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 COL26A1Q96A83 441 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 MS4A6EQ96DS6 147 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 MVB12AQ96EY5 273 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 MMABQ96EY8 250 aaPredicted RBP13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 NAF1Q96HR8 494 aaKnown RBP13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 FAR2Q96K12 515 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 GBP5Q96PP8 586 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 F2RL3Q96RI0 385 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 HBEGFQ99075 208 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 DPH2Q9BQC3 489 aaPredicted RBP13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 CENPKQ9BS16 269 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 MS4A8Q9BY19 250 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 SPRY4Q9C004 299 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 MANSC1Q9H8J5 431 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 TNFRSF12AQ9NP84 129 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 LHX9Q9NQ69 397 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 FARSBQ9NSD9 589 aaKnown RBP13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 DKK4Q9UBT3 224 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 CDC14AQ9UNH5 594 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 SLC22A7Q9Y694 548 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 MAU2Q9Y6X3 613 aa13.76□□□□□ -0.21
TNFRSF1A-216ENST00000543995 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.75□□□□□ -0.21
TNFRSF1A-216ENST00000543995 FOXE1O00358 373 aaPredicted RBP13.75□□□□□ -0.21
TNFRSF1A-216ENST00000543995 SAP18O00422 153 aaKnown RBP13.75□□□□□ -0.21
TNFRSF1A-216ENST00000543995 AZIN1O14977 448 aa13.75□□□□□ -0.21
TNFRSF1A-216ENST00000543995 SNUPNO95149 360 aaKnown RBP13.75□□□□□ -0.21
TNFRSF1A-216ENST00000543995 CHEK2O96017 543 aa13.75□□□□□ -0.21
TNFRSF1A-216ENST00000543995 PTX3P26022 381 aaPredicted RBP13.75□□□□□ -0.21
TNFRSF1A-216ENST00000543995 SERPINB3P29508 390 aa13.75□□□□□ -0.21
TNFRSF1A-216ENST00000543995 ARRB2P32121 409 aa13.75□□□□□ -0.21
TNFRSF1A-216ENST00000543995 OR1D4P47884 311 aa13.75□□□□□ -0.21
TNFRSF1A-216ENST00000543995 RAP1GDS1P52306 607 aa13.75□□□□□ -0.21
TNFRSF1A-216ENST00000543995 SKP1P63208 163 aa13.75□□□□□ -0.21
TNFRSF1A-216ENST00000543995 BST1Q10588 318 aa13.75□□□□□ -0.21
TNFRSF1A-216ENST00000543995 SLC9A5Q14940 896 aa13.75□□□□□ -0.21
TNFRSF1A-216ENST00000543995 DEFB134Q4QY38 66 aa13.75□□□□□ -0.21
TNFRSF1A-216ENST00000543995 KHDRBS2Q5VWX1 349 aaKnown RBP13.75□□□□□ -0.21
TNFRSF1A-216ENST00000543995 PRMT9Q6P2P2 845 aa13.75□□□□□ -0.21
TNFRSF1A-216ENST00000543995 FAM199XQ6PEV8 388 aaPredicted RBP13.75□□□□□ -0.21
TNFRSF1A-216ENST00000543995 PRSS41Q7RTY9 318 aa13.75□□□□□ -0.21
TNFRSF1A-216ENST00000543995 ARHGEF39Q8N4T4 335 aa13.75□□□□□ -0.21
TNFRSF1A-216ENST00000543995 ZNF248Q8NDW4 579 aa13.75□□□□□ -0.21
TNFRSF1A-216ENST00000543995 OR2L5Q8NG80 312 aa13.75□□□□□ -0.21
TNFRSF1A-216ENST00000543995 OR9A4Q8NGU2 314 aa13.75□□□□□ -0.21
TNFRSF1A-216ENST00000543995 GAL3ST3Q96A11 431 aa13.75□□□□□ -0.21
TNFRSF1A-216ENST00000543995 YIPF2Q9BWQ6 316 aa13.75□□□□□ -0.21
TNFRSF1A-216ENST00000543995 TMEM121BQ9BXQ6 578 aaPredicted RBP13.75□□□□□ -0.21
TNFRSF1A-216ENST00000543995 OR51B5Q9H339 312 aa13.75□□□□□ -0.21
TNFRSF1A-216ENST00000543995 ZNF395Q9H8N7 513 aaPredicted RBP13.75□□□□□ -0.21
TNFRSF1A-216ENST00000543995 ZNF304Q9HCX3 659 aa13.75□□□□□ -0.21
TNFRSF1A-216ENST00000543995 SLC12A4Q9UP95 1085 aa13.75□□□□□ -0.21
TNFRSF1A-216ENST00000543995 NAALAD2Q9Y3Q0 740 aa13.75□□□□□ -0.21
TNFRSF1A-216ENST00000543995 TRAF6Q9Y4K3 522 aa13.75□□□□□ -0.21
TNFRSF1A-216ENST00000543995 FER1L5A0AVI2 2057 aa13.75□□□□□ -0.21
TNFRSF1A-216ENST00000543995 A0A0G2JN53 185 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 SGK494L7N484 410 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 FOXS1O43638 330 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 TBX6O95947 436 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 PIM1P11309 404 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 FBLP22087 321 aaKnown RBP13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 HTR6P50406 440 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 SNRPNP63162 240 aaKnown RBP13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 BTN3A2P78410 334 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms