RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 ISOC1Q96CN7 298 aa8.61□□□□□ -1.03
VPS13D-212ENST00000543766 PRR11Q96HE9 360 aaPredicted RBP8.61□□□□□ -1.03
VPS13D-212ENST00000543766 C14orf144Q96I85 54 aa8.61□□□□□ -1.03
VPS13D-212ENST00000543766 TXNDC15Q96J42 360 aa8.61□□□□□ -1.03
VPS13D-212ENST00000543766 NACC1Q96RE7 527 aa8.61□□□□□ -1.03
VPS13D-212ENST00000543766 PCBD2Q9H0N5 130 aa8.61□□□□□ -1.03
VPS13D-212ENST00000543766 PRO1933Q9H354 126 aa8.61□□□□□ -1.03
VPS13D-212ENST00000543766 GAL3ST2Q9H3Q3 398 aa8.61□□□□□ -1.03
VPS13D-212ENST00000543766 RAB9BQ9NP90 201 aa8.61□□□□□ -1.03
VPS13D-212ENST00000543766 YARS2Q9Y2Z4 477 aaKnown RBP8.61□□□□□ -1.03
VPS13D-212ENST00000543766 ATP23Q9Y6H3 246 aa8.61□□□□□ -1.03
VPS13D-212ENST00000543766 A0A087X0M5 115 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 A0A1B0GX30 115 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 FKBP6O75344 327 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 CALCAP01258 141 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 GUSBP08236 651 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 TPH1P17752 444 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 RAB6AP20340 208 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 GAS6Q14393 721 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 TSNQ15631 228 aaKnown RBP8.6□□□□□ -1.03
VPS13D-212ENST00000543766 TEX30Q5JUR7 227 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 PRAMEF18Q5VWM3 479 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 HSDL2Q6YN16 418 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 RIPOR1Q6ZS17 1223 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 AHI1Q8N157 1196 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 ST6GALNAC3Q8NDV1 305 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 PHOSPHO1Q8TCT1 267 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 NPRL2Q8WTW4 380 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 PIGBQ92521 554 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 SYT11Q9BT88 431 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 GSTK1Q9Y2Q3 226 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 RBM7Q9Y580 266 aaKnown RBP8.6□□□□□ -1.03
VPS13D-212ENST00000543766 NFKBIEO00221 500 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 CCSO14618 274 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 KCNAB3O43448 404 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 TM7SF2O76062 418 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 ETS1P14921 441 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 CHRNB2P17787 502 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 PAICSP22234 425 aaKnown RBP8.6□□□□□ -1.03
VPS13D-212ENST00000543766 CPN2P22792 545 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 IVDP26440 423 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 IL12AP29459 219 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 HNRNPA1L2Q32P51 320 aaKnown RBP8.6□□□□□ -1.03
VPS13D-212ENST00000543766 MARC1Q5VT66 337 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 GPRIN3Q6ZVF9 776 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 DENND1CQ8IV53 801 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 GUF1Q8N442 669 aaKnown RBP8.6□□□□□ -1.03
VPS13D-212ENST00000543766 UBASH3BQ8TF42 649 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 OR1E3Q8WZA6 343 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 SLC25A36Q96CQ1 311 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 INTS14Q96SY0 518 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 CMSS1Q9BQ75 279 aaKnown RBP8.6□□□□□ -1.03
VPS13D-212ENST00000543766 C11orf70Q9BRQ4 267 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 TCEAL7Q9BRU2 100 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 DZANK1Q9NVP4 752 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 OPN4Q9UHM6 478 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 RHBDD3Q9Y3P4 386 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 PCDHA1Q9Y5I3 950 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 DFFAO00273 331 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 TYROBPO43914 113 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 OR2B3O76000 313 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 IGHV2-70P01814 119 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 CSTBP04080 98 aaKnown RBP8.6□□□□□ -1.03
VPS13D-212ENST00000543766 IFNA4P05014 189 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 VIPR1P32241 457 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 PKNOX1P55347 436 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 DCDC1P59894 354 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 SNRPEP62304 92 aaKnown RBP8.6□□□□□ -1.03
VPS13D-212ENST00000543766 ASAH1Q13510 395 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 CXorf57Q6NSI4 855 aaKnown RBP8.6□□□□□ -1.03
VPS13D-212ENST00000543766 DHDDSQ86SQ9 333 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 PPP1R3BQ86XI6 285 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 CPNE8Q86YQ8 564 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 UBQLNLQ8IYU4 475 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 FAM181AQ8N9Y4 354 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 NDNFQ8TB73 568 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 TECTBQ96PL2 329 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 CEP41Q9BYV8 373 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 TMPRSS11EQ9UL52 423 aa8.6□□□□□ -1.03
VPS13D-212ENST00000543766 COPG1Q9Y678 874 aaKnown RBP8.6□□□□□ -1.03
VPS13D-212ENST00000543766 CD3EAPO15446 510 aaKnown RBP8.59□□□□□ -1.03
VPS13D-212ENST00000543766 FADS1O60427 444 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 AP2A2O94973 939 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 PRAMEF1O95521 474 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 ANGPTL1O95841 491 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 LTFP02788 710 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 JMJD7P0C870 316 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 TYMPP19971 482 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 CCR7P32248 378 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 DLSTP36957 453 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 MCAMP43121 646 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 JAM2P57087 298 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 FAHD2BQ6P2I3 314 aaPredicted RBP8.59□□□□□ -1.03
VPS13D-212ENST00000543766 CLEC9AQ6UXN8 241 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 ZPBP2Q6X784 338 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 RASGRP3Q8IV61 690 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 CCDC185Q8N715 623 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 CDYL2Q8N8U2 506 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 CCNYQ8ND76 341 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 OR6M1Q8NGM8 313 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms