RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 VN1R5Q7Z5H4 357 aa17.43■□□□□ 0.38
COPS7A-216ENST00000543170 PDSS2Q86YH6 399 aa17.43■□□□□ 0.38
COPS7A-216ENST00000543170 UTP15Q8TED0 518 aaKnown RBP17.43■□□□□ 0.38
COPS7A-216ENST00000543170 ZNF483Q8TF39 744 aaPredicted RBP17.43■□□□□ 0.38
COPS7A-216ENST00000543170 MIEF2Q96C03 454 aa17.43■□□□□ 0.38
COPS7A-216ENST00000543170 CCDC126Q96EE4 140 aa17.43■□□□□ 0.38
COPS7A-216ENST00000543170 SMIM10Q96HG1 83 aa17.43■□□□□ 0.38
COPS7A-216ENST00000543170 MAGEB10Q96LZ2 347 aaPredicted RBP17.43■□□□□ 0.38
COPS7A-216ENST00000543170 ERVK-6Q9BXR3 956 aa17.43■□□□□ 0.38
COPS7A-216ENST00000543170 ACTR8Q9H981 624 aa17.43■□□□□ 0.38
COPS7A-216ENST00000543170 SEMA3GQ9NS98 782 aa17.43■□□□□ 0.38
COPS7A-216ENST00000543170 TRPC4Q9UBN4 977 aa17.43■□□□□ 0.38
COPS7A-216ENST00000543170 EMCNQ9ULC0 261 aa17.43■□□□□ 0.38
COPS7A-216ENST00000543170 NAALAD2Q9Y3Q0 740 aa17.43■□□□□ 0.38
COPS7A-216ENST00000543170 FOXO6A8MYZ6 492 aa17.42■□□□□ 0.38
COPS7A-216ENST00000543170 H0YIV9 168 aa17.42■□□□□ 0.38
COPS7A-216ENST00000543170 OR7A17O14581 309 aa17.42■□□□□ 0.38
COPS7A-216ENST00000543170 DLX3O60479 287 aa17.42■□□□□ 0.38
COPS7A-216ENST00000543170 TBX6O95947 436 aaPredicted RBP17.42■□□□□ 0.38
COPS7A-216ENST00000543170 IGHEP01854 428 aa17.42■□□□□ 0.38
COPS7A-216ENST00000543170 PROCP04070 461 aa17.42■□□□□ 0.38
COPS7A-216ENST00000543170 ZNF888P0CJ79 500 aaPredicted RBP17.42■□□□□ 0.38
COPS7A-216ENST00000543170 MMP11P24347 488 aa17.42■□□□□ 0.38
COPS7A-216ENST00000543170 PRKAA2P54646 552 aa17.42■□□□□ 0.38
COPS7A-216ENST00000543170 ZNF844Q08AG5 666 aa17.42■□□□□ 0.38
COPS7A-216ENST00000543170 GGTA1PQ4G0N0 100 aa17.42■□□□□ 0.38
COPS7A-216ENST00000543170 TOR1AIP1Q5JTV8 583 aa17.42■□□□□ 0.38
COPS7A-216ENST00000543170 APLFQ8IW19 511 aaPredicted RBP17.42■□□□□ 0.38
COPS7A-216ENST00000543170 RDH11Q8TC12 318 aa17.42■□□□□ 0.38
COPS7A-216ENST00000543170 ZNF473Q8WTR7 871 aaKnown RBP17.42■□□□□ 0.38
COPS7A-216ENST00000543170 APOBEC4Q8WW27 367 aaKnown RBP17.42■□□□□ 0.38
COPS7A-216ENST00000543170 EXTL1Q92935 676 aa17.42■□□□□ 0.38
COPS7A-216ENST00000543170 REPS1Q96D71 796 aa17.42■□□□□ 0.38
COPS7A-216ENST00000543170 L3HYPDHQ96EM0 354 aa17.42■□□□□ 0.38
COPS7A-216ENST00000543170 APOPT1Q96IL0 206 aa17.42■□□□□ 0.38
COPS7A-216ENST00000543170 NOL11Q9H8H0 719 aaKnown RBP17.42■□□□□ 0.38
COPS7A-216ENST00000543170 ZBTB26Q9HCK0 441 aa17.42■□□□□ 0.38
COPS7A-216ENST00000543170 MID2Q9UJV3 735 aa17.42■□□□□ 0.38
COPS7A-216ENST00000543170 MAN2B2Q9Y2E5 1009 aa17.42■□□□□ 0.38
COPS7A-216ENST00000543170 PCDHGA11Q9Y5H2 935 aa17.42■□□□□ 0.38
COPS7A-216ENST00000543170 KCNMB2Q9Y691 235 aa17.42■□□□□ 0.38
COPS7A-216ENST00000543170 CHD6Q8TD26 2715 aa17.42■□□□□ 0.38
COPS7A-216ENST00000543170 SCN3AQ9NY46 2000 aa17.42■□□□□ 0.38
COPS7A-216ENST00000543170 LRIT2A6NDA9 550 aa17.41■□□□□ 0.38
COPS7A-216ENST00000543170 SGK494L7N484 410 aa17.41■□□□□ 0.38
COPS7A-216ENST00000543170 PCDH17O14917 1159 aa17.41■□□□□ 0.38
COPS7A-216ENST00000543170 ATXN7O15265 892 aaPredicted RBP17.41■□□□□ 0.38
COPS7A-216ENST00000543170 PLIN3O60664 434 aa17.41■□□□□ 0.38
COPS7A-216ENST00000543170 IL10P22301 178 aa17.41■□□□□ 0.38
COPS7A-216ENST00000543170 HNRNPH1P31943 449 aaKnown RBP17.41■□□□□ 0.38
COPS7A-216ENST00000543170 PIK3CBP42338 1070 aa17.41■□□□□ 0.38
COPS7A-216ENST00000543170 CCR10P46092 362 aa17.41■□□□□ 0.38
COPS7A-216ENST00000543170 CCNG1P51959 295 aa17.41■□□□□ 0.38
COPS7A-216ENST00000543170 NAA20P61599 178 aa17.41■□□□□ 0.38
COPS7A-216ENST00000543170 KLC1Q07866 573 aa17.41■□□□□ 0.38
COPS7A-216ENST00000543170 TRAF3Q13114 568 aa17.41■□□□□ 0.38
COPS7A-216ENST00000543170 DEFB109BQ30KR1 87 aa17.41■□□□□ 0.38
COPS7A-216ENST00000543170 LINC00303Q3SY05 128 aa17.41■□□□□ 0.38
COPS7A-216ENST00000543170 ZNF678Q5SXM1 525 aa17.41■□□□□ 0.38
COPS7A-216ENST00000543170 C10orf62Q5T681 223 aaPredicted RBP17.41■□□□□ 0.38
COPS7A-216ENST00000543170 FAM69BQ5VUD6 431 aa17.41■□□□□ 0.38
COPS7A-216ENST00000543170 ZYG11AQ6WRX3 759 aa17.41■□□□□ 0.38
COPS7A-216ENST00000543170 MRGPREQ86SM8 312 aa17.41■□□□□ 0.38
COPS7A-216ENST00000543170 CROCCP2Q86T23 111 aa17.41■□□□□ 0.38
COPS7A-216ENST00000543170 ZC3H7AQ8IWR0 971 aaKnown RBP17.41■□□□□ 0.38
COPS7A-216ENST00000543170 IQCKQ8N0W5 287 aa17.41■□□□□ 0.38
COPS7A-216ENST00000543170 C4orf33Q8N1A6 199 aa17.41■□□□□ 0.38
COPS7A-216ENST00000543170 OR7G3Q8NG95 312 aa17.41■□□□□ 0.38
COPS7A-216ENST00000543170 CCT6BQ92526 530 aa17.41■□□□□ 0.38
COPS7A-216ENST00000543170 MS4A6EQ96DS6 147 aa17.41■□□□□ 0.38
COPS7A-216ENST00000543170 NSUN5Q96P11 429 aaKnown RBP17.41■□□□□ 0.38
COPS7A-216ENST00000543170 TMEM237Q96Q45 408 aa17.41■□□□□ 0.38
COPS7A-216ENST00000543170 OR1F2PQ96R84 312 aa17.41■□□□□ 0.38
COPS7A-216ENST00000543170 CRB3Q9BUF7 120 aa17.41■□□□□ 0.38
COPS7A-216ENST00000543170 REXO4Q9GZR2 422 aaKnown RBP17.41■□□□□ 0.38
COPS7A-216ENST00000543170 AICDAQ9GZX7 198 aa17.41■□□□□ 0.38
COPS7A-216ENST00000543170 SOX17Q9H6I2 414 aaPredicted RBP17.41■□□□□ 0.38
COPS7A-216ENST00000543170 SENP1Q9P0U3 644 aa17.41■□□□□ 0.38
COPS7A-216ENST00000543170 ATMQ13315 3056 aa17.41■□□□□ 0.38
COPS7A-216ENST00000543170 A0A088AWK7 358 aa17.4■□□□□ 0.38
COPS7A-216ENST00000543170 C4orf51C9J302 202 aa17.4■□□□□ 0.38
COPS7A-216ENST00000543170 RDH16O75452 317 aa17.4■□□□□ 0.38
COPS7A-216ENST00000543170 CLDN9O95484 217 aa17.4■□□□□ 0.38
COPS7A-216ENST00000543170 OTCP00480 354 aa17.4■□□□□ 0.38
COPS7A-216ENST00000543170 ATXN8OSP0DMR3 200 aa17.4■□□□□ 0.38
COPS7A-216ENST00000543170 IMPDH1P20839 514 aa17.4■□□□□ 0.38
COPS7A-216ENST00000543170 ZNF10P21506 573 aaPredicted RBP17.4■□□□□ 0.38
COPS7A-216ENST00000543170 PHEXP78562 749 aa17.4■□□□□ 0.38
COPS7A-216ENST00000543170 MAT1AQ00266 395 aaKnown RBP17.4■□□□□ 0.38
COPS7A-216ENST00000543170 SYT16Q17RD7 645 aa17.4■□□□□ 0.38
COPS7A-216ENST00000543170 KRT71Q3SY84 523 aa17.4■□□□□ 0.38
COPS7A-216ENST00000543170 DEFB134Q4QY38 66 aa17.4■□□□□ 0.38
COPS7A-216ENST00000543170 VWA2Q5GFL6 755 aa17.4■□□□□ 0.38
COPS7A-216ENST00000543170 ADNP2Q6IQ32 1131 aa17.4■□□□□ 0.38
COPS7A-216ENST00000543170 TRIM40Q6P9F5 258 aa17.4■□□□□ 0.38
COPS7A-216ENST00000543170 PCSK4Q6UW60 755 aa17.4■□□□□ 0.38
COPS7A-216ENST00000543170 LRIG3Q6UXM1 1119 aa17.4■□□□□ 0.38
COPS7A-216ENST00000543170 PPP1R32Q7Z5V6 425 aa17.4■□□□□ 0.38
COPS7A-216ENST00000543170 MYLK4Q86YV6 388 aaPredicted RBP17.4■□□□□ 0.38
COPS7A-216ENST00000543170 TMEM102Q8N9M5 508 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms