RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 AICDAQ9GZX7 198 aa16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 KLHL31Q9H511 634 aa16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 ANKHQ9HCJ1 492 aa16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 IFT80Q9P2H3 777 aaPredicted RBP16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 TRPS1Q9UHF7 1281 aa16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 ZNF225Q9UK10 706 aa16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 KCND3Q9UK17 655 aa16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 FARSAQ9Y285 508 aaKnown RBP16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 PCDHGA6Q9Y5G7 932 aa16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 MAU2Q9Y6X3 613 aa16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 MAP1BP46821 2468 aaKnown RBP16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 H0YIG0 161 aa16.24■□□□□ 0.19
RABGGTA-203ENST00000543002 SASH3O75995 380 aa16.24■□□□□ 0.19
RABGGTA-203ENST00000543002 OR4F21O95013 312 aa16.24■□□□□ 0.19
RABGGTA-203ENST00000543002 NSA2O95478 260 aaKnown RBP16.24■□□□□ 0.19
RABGGTA-203ENST00000543002 BPGMP07738 259 aa16.24■□□□□ 0.19
RABGGTA-203ENST00000543002 DHRS4L1P0CG22 281 aa16.24■□□□□ 0.19
RABGGTA-203ENST00000543002 ZNF888P0CJ79 500 aaPredicted RBP16.24■□□□□ 0.19
RABGGTA-203ENST00000543002 SMIM10L1P0DMW3 83 aa16.24■□□□□ 0.19
RABGGTA-203ENST00000543002 ALOX12P18054 663 aa16.24■□□□□ 0.19
RABGGTA-203ENST00000543002 IL1RNP18510 177 aa16.24■□□□□ 0.19
RABGGTA-203ENST00000543002 ITPKBP27987 946 aa16.24■□□□□ 0.19
RABGGTA-203ENST00000543002 HPDP32754 393 aaPredicted RBP16.24■□□□□ 0.19
RABGGTA-203ENST00000543002 AVPR1BP47901 424 aa16.24■□□□□ 0.19
RABGGTA-203ENST00000543002 PKNOX1P55347 436 aa16.24■□□□□ 0.19
RABGGTA-203ENST00000543002 RPS15P62841 145 aaKnown RBP16.24■□□□□ 0.19
RABGGTA-203ENST00000543002 DSG2Q14126 1118 aa16.24■□□□□ 0.19
RABGGTA-203ENST00000543002 SLC9A5Q14940 896 aa16.24■□□□□ 0.19
RABGGTA-203ENST00000543002 HERC3Q15034 1050 aa16.24■□□□□ 0.19
RABGGTA-203ENST00000543002 NCF4Q15080 339 aa16.24■□□□□ 0.19
RABGGTA-203ENST00000543002 ADPRMQ3LIE5 342 aa16.24■□□□□ 0.19
RABGGTA-203ENST00000543002 ARHGAP40Q5TG30 622 aa16.24■□□□□ 0.19
RABGGTA-203ENST00000543002 MLIPQ5VWP3 458 aa16.24■□□□□ 0.19
RABGGTA-203ENST00000543002 COX15Q7KZN9 410 aa16.24■□□□□ 0.19
RABGGTA-203ENST00000543002 ABHD13Q7L211 337 aa16.24■□□□□ 0.19
RABGGTA-203ENST00000543002 OVCH1Q7RTY7 1134 aa16.24■□□□□ 0.19
RABGGTA-203ENST00000543002 PRSS41Q7RTY9 318 aa16.24■□□□□ 0.19
RABGGTA-203ENST00000543002 SYVN1Q86TM6 617 aa16.24■□□□□ 0.19
RABGGTA-203ENST00000543002 OR9A4Q8NGU2 314 aa16.24■□□□□ 0.19
RABGGTA-203ENST00000543002 HUS1BQ8NHY5 278 aa16.24■□□□□ 0.19
RABGGTA-203ENST00000543002 WDR20Q8TBZ3 569 aa16.24■□□□□ 0.19
RABGGTA-203ENST00000543002 GAL3ST3Q96A11 431 aa16.24■□□□□ 0.19
RABGGTA-203ENST00000543002 COL26A1Q96A83 441 aa16.24■□□□□ 0.19
RABGGTA-203ENST00000543002 FKBP10Q96AY3 582 aa16.24■□□□□ 0.19
RABGGTA-203ENST00000543002 MS4A6EQ96DS6 147 aa16.24■□□□□ 0.19
RABGGTA-203ENST00000543002 MMABQ96EY8 250 aaPredicted RBP16.24■□□□□ 0.19
RABGGTA-203ENST00000543002 SMIM10Q96HG1 83 aa16.24■□□□□ 0.19
RABGGTA-203ENST00000543002 MS4A8Q9BY19 250 aa16.24■□□□□ 0.19
RABGGTA-203ENST00000543002 IL17BQ9UHF5 180 aa16.24■□□□□ 0.19
RABGGTA-203ENST00000543002 GPN3Q9UHW5 284 aaPredicted RBP16.24■□□□□ 0.19
RABGGTA-203ENST00000543002 TMEM120BA0PK00 339 aa16.23■□□□□ 0.19
RABGGTA-203ENST00000543002 H3BQF6 201 aa16.23■□□□□ 0.19
RABGGTA-203ENST00000543002 EFSO43281 561 aa16.23■□□□□ 0.19
RABGGTA-203ENST00000543002 KLHL18O94889 574 aa16.23■□□□□ 0.19
RABGGTA-203ENST00000543002 ALBP02768 609 aa16.23■□□□□ 0.19
RABGGTA-203ENST00000543002 CD63P08962 238 aa16.23■□□□□ 0.19
RABGGTA-203ENST00000543002 ATXN8OSP0DMR3 200 aa16.23■□□□□ 0.19
RABGGTA-203ENST00000543002 FBLP22087 321 aaKnown RBP16.23■□□□□ 0.19
RABGGTA-203ENST00000543002 PTPN4P29074 926 aa16.23■□□□□ 0.19
RABGGTA-203ENST00000543002 HNRNPH1P31943 449 aaKnown RBP16.23■□□□□ 0.19
RABGGTA-203ENST00000543002 SERPINB4P48594 390 aa16.23■□□□□ 0.19
RABGGTA-203ENST00000543002 SLC18A1P54219 525 aa16.23■□□□□ 0.19
RABGGTA-203ENST00000543002 UCNP55089 124 aa16.23■□□□□ 0.19
RABGGTA-203ENST00000543002 PHEXP78562 749 aa16.23■□□□□ 0.19
RABGGTA-203ENST00000543002 DDX39BQ13838 428 aaKnown RBP16.23■□□□□ 0.19
RABGGTA-203ENST00000543002 ST3GAL2Q16842 350 aa16.23■□□□□ 0.19
RABGGTA-203ENST00000543002 C10orf62Q5T681 223 aaPredicted RBP16.23■□□□□ 0.19
RABGGTA-203ENST00000543002 FRG2Q64ET8 278 aa16.23■□□□□ 0.19
RABGGTA-203ENST00000543002 NIPAL1Q6NVV3 410 aa16.23■□□□□ 0.19
RABGGTA-203ENST00000543002 MRPL14Q6P1L8 145 aaKnown RBP16.23■□□□□ 0.19
RABGGTA-203ENST00000543002 PDSS2Q86YH6 399 aa16.23■□□□□ 0.19
RABGGTA-203ENST00000543002 ENDOVQ8N8Q3 282 aaKnown RBP16.23■□□□□ 0.19
RABGGTA-203ENST00000543002 AGAP11Q8TF27 550 aa16.23■□□□□ 0.19
RABGGTA-203ENST00000543002 SREK1Q8WXA9 508 aaKnown RBP16.23■□□□□ 0.19
RABGGTA-203ENST00000543002 CMTM7Q96FZ5 175 aa16.23■□□□□ 0.19
RABGGTA-203ENST00000543002 SLC45A3Q96JT2 553 aa16.23■□□□□ 0.19
RABGGTA-203ENST00000543002 CNDP1Q96KN2 507 aa16.23■□□□□ 0.19
RABGGTA-203ENST00000543002 ATP6V1G3Q96LB4 118 aa16.23■□□□□ 0.19
RABGGTA-203ENST00000543002 FRG2BQ96QU4 278 aa16.23■□□□□ 0.19
RABGGTA-203ENST00000543002 TRMOQ9BU70 441 aa16.23■□□□□ 0.19
RABGGTA-203ENST00000543002 REXO4Q9GZR2 422 aaKnown RBP16.23■□□□□ 0.19
RABGGTA-203ENST00000543002 SLC26A1Q9H2B4 701 aa16.23■□□□□ 0.19
RABGGTA-203ENST00000543002 DMRT3Q9NQL9 472 aa16.23■□□□□ 0.19
RABGGTA-203ENST00000543002 PSD3Q9NYI0 1048 aa16.23■□□□□ 0.19
RABGGTA-203ENST00000543002 NAALAD2Q9Y3Q0 740 aa16.23■□□□□ 0.19
RABGGTA-203ENST00000543002 C4orf51C9J302 202 aa16.22■□□□□ 0.19
RABGGTA-203ENST00000543002 FOXE1O00358 373 aaPredicted RBP16.22■□□□□ 0.19
RABGGTA-203ENST00000543002 UBFD1O14562 309 aaKnown RBP16.22■□□□□ 0.19
RABGGTA-203ENST00000543002 FFAR3O14843 346 aa16.22■□□□□ 0.19
RABGGTA-203ENST00000543002 BIRC5O15392 142 aa16.22■□□□□ 0.19
RABGGTA-203ENST00000543002 GPR42O15529 346 aa16.22■□□□□ 0.19
RABGGTA-203ENST00000543002 GALR3O60755 368 aaPredicted RBP16.22■□□□□ 0.19
RABGGTA-203ENST00000543002 ESRRBO95718 433 aa16.22■□□□□ 0.19
RABGGTA-203ENST00000543002 TGFB1P01137 390 aa16.22■□□□□ 0.19
RABGGTA-203ENST00000543002 WT1P19544 449 aaPredicted RBP16.22■□□□□ 0.19
RABGGTA-203ENST00000543002 NEK2P51955 445 aa16.22■□□□□ 0.19
RABGGTA-203ENST00000543002 RAB8AP61006 207 aa16.22■□□□□ 0.19
RABGGTA-203ENST00000543002 SKP1P63208 163 aa16.22■□□□□ 0.19
RABGGTA-203ENST00000543002 IFT88Q13099 833 aa16.22■□□□□ 0.19
RABGGTA-203ENST00000543002 DEFB134Q4QY38 66 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms