RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 SLC5A8Q8N695 610 aa14.71□□□□□ -0.05
VPS33A-206ENST00000542310 TTLQ8NG68 377 aa14.71□□□□□ -0.05
VPS33A-206ENST00000542310 ANP32BQ92688 251 aaKnown RBP14.71□□□□□ -0.05
VPS33A-206ENST00000542310 MOCOSQ96EN8 888 aa14.71□□□□□ -0.05
VPS33A-206ENST00000542310 SEC16BQ96JE7 1060 aa14.71□□□□□ -0.05
VPS33A-206ENST00000542310 TSNARE1Q96NA8 513 aa14.71□□□□□ -0.05
VPS33A-206ENST00000542310 RBCK1Q9BYM8 510 aa14.71□□□□□ -0.05
VPS33A-206ENST00000542310 TRIM31Q9BZY9 425 aa14.71□□□□□ -0.05
VPS33A-206ENST00000542310 KCNK13Q9HB14 408 aa14.71□□□□□ -0.05
VPS33A-206ENST00000542310 STMN3Q9NZ72 180 aa14.71□□□□□ -0.05
VPS33A-206ENST00000542310 CDC7O00311 574 aa14.7□□□□□ -0.06
VPS33A-206ENST00000542310 EIF3HO15372 352 aaKnown RBP eCLIP14.7□□□□□ -0.06
VPS33A-206ENST00000542310 LRRTM2O43300 516 aa14.7□□□□□ -0.06
VPS33A-206ENST00000542310 CDC123O75794 336 aaPredicted RBP14.7□□□□□ -0.06
VPS33A-206ENST00000542310 SERPINA6P08185 405 aa14.7□□□□□ -0.06
VPS33A-206ENST00000542310 ZNF888P0CJ79 500 aaPredicted RBP14.7□□□□□ -0.06
VPS33A-206ENST00000542310 TAS2R50P59544 299 aa14.7□□□□□ -0.06
VPS33A-206ENST00000542310 POU4F1Q01851 419 aa14.7□□□□□ -0.06
VPS33A-206ENST00000542310 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.7□□□□□ -0.06
VPS33A-206ENST00000542310 ZBED8Q8IZ13 594 aa14.7□□□□□ -0.06
VPS33A-206ENST00000542310 SHISA5Q8N114 240 aa14.7□□□□□ -0.06
VPS33A-206ENST00000542310 BEST3Q8N1M1 668 aa14.7□□□□□ -0.06
VPS33A-206ENST00000542310 ANKRD53Q8N9V6 530 aa14.7□□□□□ -0.06
VPS33A-206ENST00000542310 OR5T3Q8NGG3 340 aa14.7□□□□□ -0.06
VPS33A-206ENST00000542310 UTP15Q8TED0 518 aaKnown RBP14.7□□□□□ -0.06
VPS33A-206ENST00000542310 TSLPQ969D9 159 aa14.7□□□□□ -0.06
VPS33A-206ENST00000542310 EGFL8Q99944 293 aa14.7□□□□□ -0.06
VPS33A-206ENST00000542310 PHACTR1Q9C0D0 580 aa14.7□□□□□ -0.06
VPS33A-206ENST00000542310 DERL2Q9GZP9 239 aa14.7□□□□□ -0.06
VPS33A-206ENST00000542310 COPG2Q9UBF2 871 aa14.7□□□□□ -0.06
VPS33A-206ENST00000542310 CTNNAL1Q9UBT7 734 aa14.7□□□□□ -0.06
VPS33A-206ENST00000542310 SLC22A14Q9Y267 594 aa14.7□□□□□ -0.06
VPS33A-206ENST00000542310 FAM187AA6NFU0 413 aa14.69□□□□□ -0.06
VPS33A-206ENST00000542310 CHST10O43529 356 aa14.69□□□□□ -0.06
VPS33A-206ENST00000542310 WISP3O95389 354 aaPredicted RBP14.69□□□□□ -0.06
VPS33A-206ENST00000542310 F10P00742 488 aa14.69□□□□□ -0.06
VPS33A-206ENST00000542310 SERPIND1P05546 499 aa14.69□□□□□ -0.06
VPS33A-206ENST00000542310 SMIM10L1P0DMW3 83 aa14.69□□□□□ -0.06
VPS33A-206ENST00000542310 GNAZP19086 355 aa14.69□□□□□ -0.06
VPS33A-206ENST00000542310 SAT1P21673 171 aa14.69□□□□□ -0.06
VPS33A-206ENST00000542310 DCTP40126 519 aa14.69□□□□□ -0.06
VPS33A-206ENST00000542310 SLC6A12P48065 614 aa14.69□□□□□ -0.06
VPS33A-206ENST00000542310 OR4D2P58180 307 aa14.69□□□□□ -0.06
VPS33A-206ENST00000542310 SLC26A5P58743 744 aa14.69□□□□□ -0.06
VPS33A-206ENST00000542310 ZNF460Q14592 562 aa14.69□□□□□ -0.06
VPS33A-206ENST00000542310 ZRSR2Q15696 482 aaKnown RBP14.69□□□□□ -0.06
VPS33A-206ENST00000542310 ZNF766Q5HY98 468 aa14.69□□□□□ -0.06
VPS33A-206ENST00000542310 CRLF3Q8IUI8 442 aa14.69□□□□□ -0.06
VPS33A-206ENST00000542310 TCAIMQ8N3R3 496 aa14.69□□□□□ -0.06
VPS33A-206ENST00000542310 MDS2Q8NDY4 140 aa14.69□□□□□ -0.06
VPS33A-206ENST00000542310 CDKL2Q92772 493 aa14.69□□□□□ -0.06
VPS33A-206ENST00000542310 RELTQ969Z4 430 aa14.69□□□□□ -0.06
VPS33A-206ENST00000542310 TSPAN17Q96FV3 270 aa14.69□□□□□ -0.06
VPS33A-206ENST00000542310 SMIM10Q96HG1 83 aa14.69□□□□□ -0.06
VPS33A-206ENST00000542310 KRT12Q99456 494 aa14.69□□□□□ -0.06
VPS33A-206ENST00000542310 PITHD1Q9GZP4 211 aaPredicted RBP14.69□□□□□ -0.06
VPS33A-206ENST00000542310 GPAMQ9HCL2 828 aa14.69□□□□□ -0.06
VPS33A-206ENST00000542310 GPRC5BQ9NZH0 403 aa14.69□□□□□ -0.06
VPS33A-206ENST00000542310 WHRNQ9P202 907 aa14.69□□□□□ -0.06
VPS33A-206ENST00000542310 TEX15Q9BXT5 2789 aa14.68□□□□□ -0.06
VPS33A-206ENST00000542310 SYNDIG1LA6NDD5 238 aa14.68□□□□□ -0.06
VPS33A-206ENST00000542310 OR2W5A6NFC9 320 aa14.68□□□□□ -0.06
VPS33A-206ENST00000542310 A8MUI8 341 aa14.68□□□□□ -0.06
VPS33A-206ENST00000542310 WDR47O94967 919 aa14.68□□□□□ -0.06
VPS33A-206ENST00000542310 RNH1P13489 461 aaKnown RBP14.68□□□□□ -0.06
VPS33A-206ENST00000542310 HPDP32754 393 aaPredicted RBP14.68□□□□□ -0.06
VPS33A-206ENST00000542310 SLC12A2P55011 1212 aa14.68□□□□□ -0.06
VPS33A-206ENST00000542310 STXBP1P61764 594 aaKnown RBP14.68□□□□□ -0.06
VPS33A-206ENST00000542310 ACTN3Q08043 901 aaPredicted RBP14.68□□□□□ -0.06
VPS33A-206ENST00000542310 HYAL2Q12891 473 aa14.68□□□□□ -0.06
VPS33A-206ENST00000542310 CALCOCO2Q13137 446 aa14.68□□□□□ -0.06
VPS33A-206ENST00000542310 TUBA3CQ13748 450 aa14.68□□□□□ -0.06
VPS33A-206ENST00000542310 TSNQ15631 228 aaKnown RBP14.68□□□□□ -0.06
VPS33A-206ENST00000542310 CDKL4Q5MAI5 379 aa14.68□□□□□ -0.06
VPS33A-206ENST00000542310 TUBA3EQ6PEY2 450 aa14.68□□□□□ -0.06
VPS33A-206ENST00000542310 GFRALQ6UXV0 394 aa14.68□□□□□ -0.06
VPS33A-206ENST00000542310 CYS1Q717R9 158 aa14.68□□□□□ -0.06
VPS33A-206ENST00000542310 CEP97Q8IW35 865 aa14.68□□□□□ -0.06
VPS33A-206ENST00000542310 SLC34A3Q8N130 599 aa14.68□□□□□ -0.06
VPS33A-206ENST00000542310 HORMAD2Q8N7B1 307 aa14.68□□□□□ -0.06
VPS33A-206ENST00000542310 ELP5Q8TE02 316 aa14.68□□□□□ -0.06
VPS33A-206ENST00000542310 CREB3L4Q8TEY5 395 aa14.68□□□□□ -0.06
VPS33A-206ENST00000542310 PYROXD1Q8WU10 500 aa14.68□□□□□ -0.06
VPS33A-206ENST00000542310 ANKRD49Q8WVL7 239 aa14.68□□□□□ -0.06
VPS33A-206ENST00000542310 GAL3ST3Q96A11 431 aa14.68□□□□□ -0.06
VPS33A-206ENST00000542310 RHBDF1Q96CC6 855 aa14.68□□□□□ -0.06
VPS33A-206ENST00000542310 SCMH1Q96GD3 660 aa14.68□□□□□ -0.06
VPS33A-206ENST00000542310 NPAS2Q99743 824 aa14.68□□□□□ -0.06
VPS33A-206ENST00000542310 CPNE1Q99829 537 aa14.68□□□□□ -0.06
VPS33A-206ENST00000542310 UTP23Q9BRU9 249 aaKnown RBP14.68□□□□□ -0.06
VPS33A-206ENST00000542310 EHD1Q9H4M9 534 aa14.68□□□□□ -0.06
VPS33A-206ENST00000542310 SNX24Q9Y343 169 aa14.68□□□□□ -0.06
VPS33A-206ENST00000542310 MMACHCQ9Y4U1 282 aa14.68□□□□□ -0.06
VPS33A-206ENST00000542310 CACNA1DQ01668 2161 aa14.68□□□□□ -0.06
VPS33A-206ENST00000542310 NOTCH2Q04721 2471 aa14.68□□□□□ -0.06
VPS33A-206ENST00000542310 IGKV3D-11A0A0A0MRZ8 115 aa14.67□□□□□ -0.06
VPS33A-206ENST00000542310 TCRBV16S1A1N1A0A5B0 115 aa14.67□□□□□ -0.06
VPS33A-206ENST00000542310 ASPDHA6ND91 283 aa14.67□□□□□ -0.06
VPS33A-206ENST00000542310 SAGE2PA6NJ88 616 aa14.67□□□□□ -0.06
VPS33A-206ENST00000542310 PSMD12O00232 456 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms