RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 PCDHGB3Q9Y5G1 929 aa9.17□□□□□ -0.94
CNOT4-212ENST00000541284 SLC5A10A0PJK1 596 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 CLCA1A8K7I4 914 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 WASH3PC4AMC7 463 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 CNOT3O75175 753 aaKnown RBP9.16□□□□□ -0.94
CNOT4-212ENST00000541284 OPN1SWP03999 348 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 ETFAP13804 333 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 HSD3B1P14060 373 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 CYP2A7P20853 494 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 HSD3B2P26439 372 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 CTSCP53634 463 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 SNRPD1P62314 119 aaKnown RBP9.16□□□□□ -0.94
CNOT4-212ENST00000541284 HBA1P69905 142 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 IRF8Q02556 426 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 SLC13A2Q13183 592 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 XKR6Q5GH73 641 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 TMEM215Q68D42 235 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 ATCAYQ86WG3 371 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 TMEM121BQ9BXQ6 578 aaPredicted RBP9.16□□□□□ -0.94
CNOT4-212ENST00000541284 SMG9Q9H0W8 520 aaKnown RBP9.16□□□□□ -0.94
CNOT4-212ENST00000541284 C1GALT1Q9NS00 363 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 THSD1Q9NS62 852 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 GPR83Q9NYM4 423 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 TAS2R16Q9NYV7 291 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 TESMINQ9Y4I5 508 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 UGT2A1Q9Y4X1 527 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 A3GALT2U3KPV4 340 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 CKAP5Q14008 2032 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 J3KTA2 159 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 RNASET2O00584 256 aaKnown RBP9.16□□□□□ -0.94
CNOT4-212ENST00000541284 KIAA0355O15063 1070 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 FKBP9O95302 570 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 BDKRB1P46663 353 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 ARHGDIAP52565 204 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 PCBP3P57721 371 aaKnown RBP9.16□□□□□ -0.94
CNOT4-212ENST00000541284 DCDC1P59894 354 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 ZNF404Q494X3 552 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 ZNF770Q6IQ21 691 aaPredicted RBP9.16□□□□□ -0.94
CNOT4-212ENST00000541284 CNKSR3Q6P9H4 555 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 AGTRAPQ6RW13 159 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 SLCO4C1Q6ZQN7 724 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 ARMCX6Q7L4S7 300 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 TMCO2Q7Z6W1 182 aaPredicted RBP9.16□□□□□ -0.94
CNOT4-212ENST00000541284 METTL3Q86U44 580 aaKnown RBP9.16□□□□□ -0.94
CNOT4-212ENST00000541284 OR2A12Q8NGT7 310 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 HUS1BQ8NHY5 278 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 MCFD2Q8NI22 146 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 FCGR1BQ92637 280 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 ZHX1-C8orf76Q96EF9 292 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 MAGEB10Q96LZ2 347 aaPredicted RBP9.16□□□□□ -0.94
CNOT4-212ENST00000541284 OR51E2Q9H255 320 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 ZDHHC6Q9H6R6 413 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 AMBNQ9NP70 447 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 KIF17Q9P2E2 1029 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 SUV39H1O43463 412 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 SEMA7AO75326 666 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 HIST1H2AGP0C0S8 130 aaPredicted RBP9.16□□□□□ -0.94
CNOT4-212ENST00000541284 HIST1H2ADP20671 130 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 CTSKP43235 329 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 GSSP48637 474 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 EIF2B2P49770 351 aaKnown RBP9.16□□□□□ -0.94
CNOT4-212ENST00000541284 NUDT6P53370 316 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 CASP9P55211 416 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 CSNK2BP67870 215 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 VEPH1Q14D04 833 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 EXOC3L2Q2M3D2 409 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 COLEC12Q5KU26 742 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 DDX53Q86TM3 631 aaKnown RBP9.16□□□□□ -0.94
CNOT4-212ENST00000541284 RASGEF1AQ8N9B8 481 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 HIST1H2AHQ96KK5 128 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 PKP4Q99569 1192 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 HIST1H2AJQ99878 128 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 H2AFJQ9BTM1 129 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 CENPOQ9BU64 300 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 MMP27Q9H306 513 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 EPS8L2Q9H6S3 715 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 SP140LQ9H930 580 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 NFKBIL1Q9UBC1 381 aaPredicted RBP9.16□□□□□ -0.94
CNOT4-212ENST00000541284 FTSJ1Q9UET6 329 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 CCL26Q9Y258 94 aa9.16□□□□□ -0.94
CNOT4-212ENST00000541284 TSPAN11A1L157 253 aa9.15□□□□□ -0.94
CNOT4-212ENST00000541284 A8MVJ9 347 aa9.15□□□□□ -0.94
CNOT4-212ENST00000541284 TLL1O43897 1013 aa9.15□□□□□ -0.94
CNOT4-212ENST00000541284 AIREO43918 545 aa9.15□□□□□ -0.94
CNOT4-212ENST00000541284 SH3BGRLO75368 114 aa9.15□□□□□ -0.94
CNOT4-212ENST00000541284 SLC16A8O95907 504 aa9.15□□□□□ -0.94
CNOT4-212ENST00000541284 STSP08842 583 aa9.15□□□□□ -0.94
CNOT4-212ENST00000541284 POU2F2P09086 479 aa9.15□□□□□ -0.94
CNOT4-212ENST00000541284 CBLP22681 906 aa9.15□□□□□ -0.94
CNOT4-212ENST00000541284 TIA1P31483 386 aaKnown RBP eCLIP9.15□□□□□ -0.943e-7■■■■□ 24.4
CNOT4-212ENST00000541284 ETV6P41212 452 aa9.15□□□□□ -0.94
CNOT4-212ENST00000541284 SLC15A1P46059 708 aa9.15□□□□□ -0.94
CNOT4-212ENST00000541284 XCR1P46094 333 aa9.15□□□□□ -0.94
CNOT4-212ENST00000541284 OR1E2P47887 323 aa9.15□□□□□ -0.94
CNOT4-212ENST00000541284 PREPP48147 710 aa9.15□□□□□ -0.94
CNOT4-212ENST00000541284 SERPINB10P48595 397 aa9.15□□□□□ -0.94
CNOT4-212ENST00000541284 HMGA2P52926 109 aa9.15□□□□□ -0.94
CNOT4-212ENST00000541284 MICAQ29983 383 aa9.15□□□□□ -0.94
CNOT4-212ENST00000541284 CPTPQ5TA50 214 aa9.15□□□□□ -0.94
CNOT4-212ENST00000541284 Q6ZVU0 165 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms