RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 TCRBV7S3A2A0A539 114 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 TCRBV16S1A1N1A0A5B0 115 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 ZNF860A6NHJ4 632 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 SAGE2PA6NJ88 616 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 GALR3O60755 368 aaPredicted RBP6.83□□□□□ -1.32
YBX3-209ENST00000540747 FHP07954 510 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 CCDC175P0C221 793 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 ENO3P13929 434 aaPredicted RBP6.83□□□□□ -1.32
YBX3-209ENST00000540747 CD99P14209 185 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 TFEBP19484 476 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 TPSB2P20231 275 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 CHRM3P20309 590 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 MGAT1P26572 445 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 PTGS2P35354 604 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 MAGEA6P43360 314 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 CYB561P49447 251 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 MEOX1P50221 254 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 ITGA8P53708 1063 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 IST1P53990 364 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 OR4D2P58180 307 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 TAS2R50P59544 299 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 GNG11P61952 73 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 TIAL1Q01085 375 aaKnown RBP eCLIP6.83□□□□□ -1.32
YBX3-209ENST00000540747 OC90Q02509 493 aaPredicted RBP6.83□□□□□ -1.32
YBX3-209ENST00000540747 TSTA3Q13630 321 aaPredicted RBP6.83□□□□□ -1.32
YBX3-209ENST00000540747 TPSAB1Q15661 275 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 MAPKAPK3Q16644 382 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 MFSD4BQ5TF39 518 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 QSOX2Q6ZRP7 698 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 KIAA0408Q6ZU52 694 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 ADCK2Q7Z695 626 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 SDCCAG8Q86SQ7 713 aaPredicted RBP6.83□□□□□ -1.32
YBX3-209ENST00000540747 ASPGQ86U10 573 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 SLC26A11Q86WA9 606 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 SULF2Q8IWU5 870 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 SYCE1Q8N0S2 351 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 MFSD9Q8NBP5 474 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 CAMKVQ8NCB2 501 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 APCDD1LQ8NCL9 501 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 ZNF740Q8NDX6 193 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 ABHD11Q8NFV4 315 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 OR4K1Q8NGD4 311 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 ZCCHC10Q8TBK6 192 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 CD200R1Q8TD46 325 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 MCOLN3Q8TDD5 553 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 C1orf54Q8WWF1 131 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 NINJ1Q92982 152 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 TBC1D20Q96BZ9 403 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 PEX11GQ96HA9 241 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 SEC16BQ96JE7 1060 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 RBCK1Q9BYM8 510 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 UCK2Q9BZX2 261 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 TP63Q9H3D4 680 aaPredicted RBP6.83□□□□□ -1.32
YBX3-209ENST00000540747 ANKHQ9HCJ1 492 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 CCDC177Q9NQR7 707 aaPredicted RBP6.83□□□□□ -1.32
YBX3-209ENST00000540747 INTS10Q9NVR2 710 aaKnown RBP6.83□□□□□ -1.32
YBX3-209ENST00000540747 COQ3Q9NZJ6 369 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 BFARQ9NZS9 450 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 ZNF223Q9UK11 482 aaPredicted RBP6.83□□□□□ -1.32
YBX3-209ENST00000540747 ZNF148Q9UQR1 794 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 DRG1Q9Y295 367 aaKnown RBP6.83□□□□□ -1.32
YBX3-209ENST00000540747 KLF13Q9Y2Y9 288 aaPredicted RBP6.83□□□□□ -1.32
YBX3-209ENST00000540747 DHRS7Q9Y394 339 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 CLDN16Q9Y5I7 305 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 ATRQ13535 2644 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 PHF3Q92576 2039 aaKnown RBP6.83□□□□□ -1.32
YBX3-209ENST00000540747 SCN3AQ9NY46 2000 aa6.83□□□□□ -1.32
YBX3-209ENST00000540747 COL6A5A8TX70 2615 aa6.82□□□□□ -1.32
YBX3-209ENST00000540747 ZCWPW2A0A1B0GU75 182 aa6.82□□□□□ -1.32
YBX3-209ENST00000540747 CTAGE15A4D2H0 777 aa6.82□□□□□ -1.32
YBX3-209ENST00000540747 FAM90A27PA6NNH2 459 aa6.82□□□□□ -1.32
YBX3-209ENST00000540747 AP3B1O00203 1094 aa6.82□□□□□ -1.32
YBX3-209ENST00000540747 EIF3FO00303 357 aaPredicted RBP6.82□□□□□ -1.32
YBX3-209ENST00000540747 TFECO14948 347 aaPredicted RBP6.82□□□□□ -1.32
YBX3-209ENST00000540747 CHST10O43529 356 aa6.82□□□□□ -1.32
YBX3-209ENST00000540747 PEX1O43933 1283 aa6.82□□□□□ -1.32
YBX3-209ENST00000540747 HS6ST1O60243 411 aa6.82□□□□□ -1.32
YBX3-209ENST00000540747 KLK8O60259 260 aa6.82□□□□□ -1.32
YBX3-209ENST00000540747 CDC123O75794 336 aaPredicted RBP6.82□□□□□ -1.32
YBX3-209ENST00000540747 TPOP07202 933 aa6.82□□□□□ -1.32
YBX3-209ENST00000540747 F7P08709 466 aaPredicted RBP6.82□□□□□ -1.32
YBX3-209ENST00000540747 RFC3P40938 356 aa6.82□□□□□ -1.32
YBX3-209ENST00000540747 GPR143P51810 404 aa6.82□□□□□ -1.32
YBX3-209ENST00000540747 NAP1L1P55209 391 aaKnown RBP6.82□□□□□ -1.32
YBX3-209ENST00000540747 DLX5P56178 289 aa6.82□□□□□ -1.32
YBX3-209ENST00000540747 NUP107P57740 925 aa6.82□□□□□ -1.32
YBX3-209ENST00000540747 CDK16Q00536 496 aa6.82□□□□□ -1.32
YBX3-209ENST00000540747 ACTN3Q08043 901 aaPredicted RBP6.82□□□□□ -1.32
YBX3-209ENST00000540747 CUL1Q13616 776 aa6.82□□□□□ -1.32
YBX3-209ENST00000540747 HERC3Q15034 1050 aa6.82□□□□□ -1.32
YBX3-209ENST00000540747 TTLL9Q3SXZ7 439 aa6.82□□□□□ -1.32
YBX3-209ENST00000540747 TMEM211Q6ICI0 200 aa6.82□□□□□ -1.32
YBX3-209ENST00000540747 CAPN13Q6MZZ7 669 aaPredicted RBP6.82□□□□□ -1.32
YBX3-209ENST00000540747 NEPROQ6NW34 567 aa6.82□□□□□ -1.32
YBX3-209ENST00000540747 MBOAT1Q6ZNC8 495 aa6.82□□□□□ -1.32
YBX3-209ENST00000540747 CEP128Q6ZU80 1094 aa6.82□□□□□ -1.32
YBX3-209ENST00000540747 PIWIL4Q7Z3Z4 852 aaKnown RBP6.82□□□□□ -1.32
YBX3-209ENST00000540747 MDGA2Q7Z553 956 aa6.82□□□□□ -1.32
YBX3-209ENST00000540747 STRA8Q7Z7C7 330 aa6.82□□□□□ -1.32
YBX3-209ENST00000540747 CTAGE6Q86UF2 777 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms