RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 IGFBP1P08833 259 aaPredicted RBP13.13□□□□□ -0.31
BNIP3-202ENST00000540159 TIMP2P16035 220 aa13.13□□□□□ -0.31
BNIP3-202ENST00000540159 IDSP22304 550 aa13.13□□□□□ -0.31
BNIP3-202ENST00000540159 GRK5P34947 590 aa13.13□□□□□ -0.31
BNIP3-202ENST00000540159 GABARAPL2P60520 117 aa13.13□□□□□ -0.31
BNIP3-202ENST00000540159 DMC1Q14565 340 aa13.13□□□□□ -0.31
BNIP3-202ENST00000540159 EXOC3L2Q2M3D2 409 aa13.13□□□□□ -0.31
BNIP3-202ENST00000540159 WASH2PQ6VEQ5 465 aa13.13□□□□□ -0.31
BNIP3-202ENST00000540159 TSEN54Q7Z6J9 526 aaKnown RBP13.13□□□□□ -0.31
BNIP3-202ENST00000540159 MEX3DQ86XN8 651 aaKnown RBP13.13□□□□□ -0.31
BNIP3-202ENST00000540159 ZNF347Q96SE7 839 aa13.13□□□□□ -0.31
BNIP3-202ENST00000540159 NEURL2Q9BR09 285 aa13.13□□□□□ -0.31
BNIP3-202ENST00000540159 CHCHD6Q9BRQ6 235 aa13.13□□□□□ -0.31
BNIP3-202ENST00000540159 ASIC5Q9NY37 505 aa13.13□□□□□ -0.31
BNIP3-202ENST00000540159 TMEM98Q9Y2Y6 226 aa13.13□□□□□ -0.31
BNIP3-202ENST00000540159 IGLV3-16A0A075B6K0 115 aa13.12□□□□□ -0.31
BNIP3-202ENST00000540159 ZSCAN9O15535 394 aaPredicted RBP13.12□□□□□ -0.31
BNIP3-202ENST00000540159 TBX1O43435 398 aa13.12□□□□□ -0.31
BNIP3-202ENST00000540159 CATP04040 527 aaKnown RBP13.12□□□□□ -0.31
BNIP3-202ENST00000540159 SERPIND1P05546 499 aa13.12□□□□□ -0.31
BNIP3-202ENST00000540159 POLR2EP19388 210 aaKnown RBP13.12□□□□□ -0.31
BNIP3-202ENST00000540159 GADD45AP24522 165 aa13.12□□□□□ -0.31
BNIP3-202ENST00000540159 GTF2E2P29084 291 aaKnown RBP13.12□□□□□ -0.31
BNIP3-202ENST00000540159 SLC5A12Q1EHB4 618 aa13.12□□□□□ -0.31
BNIP3-202ENST00000540159 RFX4Q33E94 735 aa13.12□□□□□ -0.31
BNIP3-202ENST00000540159 COMMD6Q7Z4G1 85 aa13.12□□□□□ -0.31
BNIP3-202ENST00000540159 KLHL23Q8NBE8 558 aa13.12□□□□□ -0.31
BNIP3-202ENST00000540159 RAB8BQ92930 207 aa13.12□□□□□ -0.31
BNIP3-202ENST00000540159 C7orf34Q96L11 122 aa13.12□□□□□ -0.31
BNIP3-202ENST00000540159 IL4I1Q96RQ9 567 aa13.12□□□□□ -0.31
BNIP3-202ENST00000540159 HEPHQ9BQS7 1158 aa13.12□□□□□ -0.31
BNIP3-202ENST00000540159 HMG20AQ9NP66 347 aa13.12□□□□□ -0.31
BNIP3-202ENST00000540159 ADPRHL2Q9NX46 363 aa13.12□□□□□ -0.31
BNIP3-202ENST00000540159 NDUFAF4Q9P032 175 aa13.12□□□□□ -0.31
BNIP3-202ENST00000540159 GULP1Q9UBP9 304 aa13.12□□□□□ -0.31
BNIP3-202ENST00000540159 NDRG4Q9ULP0 352 aaKnown RBP13.12□□□□□ -0.31
BNIP3-202ENST00000540159 PCYT1BQ9Y5K3 369 aaPredicted RBP13.12□□□□□ -0.31
BNIP3-202ENST00000540159 PNMA8CA0A1B0GUJ8 204 aa13.12□□□□□ -0.31
BNIP3-202ENST00000540159 LINC00854A0A1B0GVQ3 168 aa13.12□□□□□ -0.31
BNIP3-202ENST00000540159 NME6O75414 186 aaPredicted RBP13.12□□□□□ -0.31
BNIP3-202ENST00000540159 C9P02748 559 aa13.12□□□□□ -0.31
BNIP3-202ENST00000540159 ZNF12P17014 697 aa13.12□□□□□ -0.31
BNIP3-202ENST00000540159 ERVFC1P60507 584 aa13.12□□□□□ -0.31
BNIP3-202ENST00000540159 MTAPQ13126 283 aa13.12□□□□□ -0.31
BNIP3-202ENST00000540159 PPIGQ13427 754 aaKnown RBP eCLIP13.12□□□□□ -0.311e-6■□□□□ 8.9
BNIP3-202ENST00000540159 TOP3AQ13472 1001 aaPredicted RBP13.12□□□□□ -0.31
BNIP3-202ENST00000540159 NFE2L1Q14494 772 aa13.12□□□□□ -0.31
BNIP3-202ENST00000540159 PLEKHS1Q5SXH7 462 aa13.12□□□□□ -0.31
BNIP3-202ENST00000540159 CAPN13Q6MZZ7 669 aaPredicted RBP13.12□□□□□ -0.31
BNIP3-202ENST00000540159 BCDIN3DQ7Z5W3 292 aaKnown RBP13.12□□□□□ -0.31
BNIP3-202ENST00000540159 FAM20CQ8IXL6 584 aa13.12□□□□□ -0.31
BNIP3-202ENST00000540159 LGI4Q8N135 537 aa13.12□□□□□ -0.31
BNIP3-202ENST00000540159 OR10G2Q8NGC3 310 aa13.12□□□□□ -0.31
BNIP3-202ENST00000540159 HPS1Q92902 700 aa13.12□□□□□ -0.31
BNIP3-202ENST00000540159 IRF7Q92985 503 aa13.12□□□□□ -0.31
BNIP3-202ENST00000540159 DACH2Q96NX9 599 aa13.12□□□□□ -0.31
BNIP3-202ENST00000540159 OR51E2Q9H255 320 aa13.12□□□□□ -0.31
BNIP3-202ENST00000540159 DUSP21Q9H596 190 aa13.12□□□□□ -0.31
BNIP3-202ENST00000540159 TMED5Q9Y3A6 229 aa13.12□□□□□ -0.31
BNIP3-202ENST00000540159 F5P12259 2224 aa13.12□□□□□ -0.31
BNIP3-202ENST00000540159 HELZP42694 1942 aaKnown RBP13.12□□□□□ -0.31
BNIP3-202ENST00000540159 TRIM64BA6NI03 449 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 LATO43561 262 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 GABARAPO95166 117 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 ITGAMP11215 1152 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 TRPC1P48995 793 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 AP1S2P56377 157 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 POLR2LP62875 67 aaKnown RBP13.11□□□□□ -0.31
BNIP3-202ENST00000540159 RAET1GQ6H3X3 334 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 FAM217AQ8IXS0 508 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 ELMOD1Q8N336 334 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 VPS37AQ8NEZ2 397 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 VANGL1Q8TAA9 524 aaPredicted RBP13.11□□□□□ -0.31
BNIP3-202ENST00000540159 CHPT1Q8WUD6 406 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 Q96MT0 163 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 EMILIN2Q9BXX0 1053 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 DCSTAMPQ9H295 470 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 KCNE2Q9Y6J6 123 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 TMEM229AB2RXF0 380 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 ATG13O75143 517 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 GSTM1P09488 218 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 ALPPL2P10696 532 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 ZNF8P17098 575 aaPredicted RBP13.11□□□□□ -0.31
BNIP3-202ENST00000540159 VIPR1P32241 457 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 GSTM4Q03013 218 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 GGTA1PQ4G0N0 100 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 SLC22A16Q86VW1 577 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 TCAIMQ8N3R3 496 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 SYNPOQ8N3V7 929 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 C11orf65Q8NCR3 313 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 MCFD2Q8NI22 146 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 LZICQ8WZA0 190 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 GLYATL1Q969I3 302 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 C11orf16Q9NQ32 467 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 INIPQ9NRY2 104 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 SPATA6Q9NWH7 488 aaPredicted RBP13.11□□□□□ -0.31
BNIP3-202ENST00000540159 ERVW-1Q9UQF0 538 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 SNX11Q9Y5W9 270 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 LYVE1Q9Y5Y7 322 aa13.11□□□□□ -0.31
BNIP3-202ENST00000540159 PRAMEF33A0A0G2JMD5 474 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms