RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 CHSY3Q70JA7 882 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 TMEM126BQ8IUX1 230 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 C17orf50Q8WW18 174 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 USP7Q93009 1102 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 C7orf26Q96N11 449 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 TEFMQ96QE5 360 aaKnown RBP14.7□□□□□ -0.06
DDB1-216ENST00000539739 CTRCQ99895 268 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 SYNPO2LQ9H987 977 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 POLR1BQ9H9Y6 1135 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 BRF2Q9HAW0 419 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 APMAPQ9HDC9 416 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 DMRT3Q9NQL9 472 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 ENAMQ9NRM1 1142 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 STARD5Q9NSY2 213 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 NMRK1Q9NWW6 199 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 PPT2Q9UMR5 302 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 PCDHGA8Q9Y5G5 932 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 FITM1A5D6W6 292 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 MAGEB17A8MXT2 336 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 TCP11X1B4DZS4 312 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 P2RX6O15547 441 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 SMNDC1O75940 238 aaKnown RBP eCLIP14.7□□□□□ -0.06
DDB1-216ENST00000539739 TGFB1P01137 390 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 ETV5P41161 510 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 EMP3P54852 163 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 RPS13P62277 151 aaKnown RBP14.7□□□□□ -0.06
DDB1-216ENST00000539739 TGM3Q08188 693 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 CSTF3Q12996 717 aaKnown RBP14.7□□□□□ -0.06
DDB1-216ENST00000539739 HKDC1Q2TB90 917 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 PRTGQ2VWP7 1150 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 TCHHL1Q5QJ38 904 aaPredicted RBP14.7□□□□□ -0.06
DDB1-216ENST00000539739 ADNP2Q6IQ32 1131 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 VN1R5Q7Z5H4 357 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 MARCH9Q86YJ5 346 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 GBP7Q8N8V2 638 aaPredicted RBP14.7□□□□□ -0.06
DDB1-216ENST00000539739 SRFBP1Q8NEF9 429 aaKnown RBP14.7□□□□□ -0.06
DDB1-216ENST00000539739 SERPINI1Q99574 410 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 CCT7Q99832 543 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 MACROD1Q9BQ69 325 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 NDC1Q9BTX1 674 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 DDA1Q9BW61 102 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 CCDC134Q9H6E4 229 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 FARSBQ9NSD9 589 aaKnown RBP14.7□□□□□ -0.06
DDB1-216ENST00000539739 SRPK3Q9UPE1 567 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 RUVBL1Q9Y265 456 aaKnown RBP14.7□□□□□ -0.06
DDB1-216ENST00000539739 DNAJC15Q9Y5T4 150 aa14.7□□□□□ -0.06
DDB1-216ENST00000539739 SPTBN4Q9H254 2564 aa14.69□□□□□ -0.06
DDB1-216ENST00000539739 KIF26BQ2KJY2 2108 aa14.69□□□□□ -0.06
DDB1-216ENST00000539739 SERTM1A2A2V5 107 aa14.69□□□□□ -0.06
DDB1-216ENST00000539739 HYKKA2RU49 373 aa14.69□□□□□ -0.06
DDB1-216ENST00000539739 LRIT2A6NDA9 550 aa14.69□□□□□ -0.06
DDB1-216ENST00000539739 TMEM233B4DJY2 109 aa14.69□□□□□ -0.06
DDB1-216ENST00000539739 SLCO1B7G3V0H7 640 aa14.69□□□□□ -0.06
DDB1-216ENST00000539739 H3BMH7 237 aa14.69□□□□□ -0.06
DDB1-216ENST00000539739 ZNF749O43361 778 aa14.69□□□□□ -0.06
DDB1-216ENST00000539739 SCRG1O75711 98 aa14.69□□□□□ -0.06
DDB1-216ENST00000539739 CTSBP07858 339 aa14.69□□□□□ -0.06
DDB1-216ENST00000539739 HBQ1P09105 142 aa14.69□□□□□ -0.06
DDB1-216ENST00000539739 RBMS1P29558 406 aaKnown RBP14.69□□□□□ -0.06
DDB1-216ENST00000539739 HK2P52789 917 aa14.69□□□□□ -0.06
DDB1-216ENST00000539739 GABREP78334 506 aa14.69□□□□□ -0.06
DDB1-216ENST00000539739 ABRAXAS2Q15018 415 aa14.69□□□□□ -0.06
DDB1-216ENST00000539739 IMPG1Q17R60 797 aa14.69□□□□□ -0.06
DDB1-216ENST00000539739 MUM1Q2TAK8 710 aa14.69□□□□□ -0.06
DDB1-216ENST00000539739 TMEM35AQ53FP2 167 aa14.69□□□□□ -0.06
DDB1-216ENST00000539739 TOR1AIP1Q5JTV8 583 aa14.69□□□□□ -0.06
DDB1-216ENST00000539739 PWWP2BQ6NUJ5 590 aa14.69□□□□□ -0.06
DDB1-216ENST00000539739 FAM47EQ6ZV65 393 aa14.69□□□□□ -0.06
DDB1-216ENST00000539739 ABHD13Q7L211 337 aa14.69□□□□□ -0.06
DDB1-216ENST00000539739 DDIASQ8IXT1 998 aa14.69□□□□□ -0.06
DDB1-216ENST00000539739 KCT2Q8NC54 265 aa14.69□□□□□ -0.06
DDB1-216ENST00000539739 PIWIL2Q8TC59 973 aaKnown RBP14.69□□□□□ -0.06
DDB1-216ENST00000539739 TWIST2Q8WVJ9 160 aa14.69□□□□□ -0.06
DDB1-216ENST00000539739 MS4A8Q9BY19 250 aa14.69□□□□□ -0.06
DDB1-216ENST00000539739 SLC6A16Q9GZN6 736 aa14.69□□□□□ -0.06
DDB1-216ENST00000539739 NRSN2Q9GZP1 204 aa14.69□□□□□ -0.06
DDB1-216ENST00000539739 REXO4Q9GZR2 422 aaKnown RBP14.69□□□□□ -0.06
DDB1-216ENST00000539739 SLCO1B3Q9NPD5 702 aa14.69□□□□□ -0.06
DDB1-216ENST00000539739 PNPOQ9NVS9 261 aa14.69□□□□□ -0.06
DDB1-216ENST00000539739 PCDHB3Q9Y5E6 796 aa14.69□□□□□ -0.06
DDB1-216ENST00000539739 SPTBN2O15020 2390 aa14.68□□□□□ -0.06
DDB1-216ENST00000539739 A0A1W2PNU3 283 aaPredicted RBP14.68□□□□□ -0.06
DDB1-216ENST00000539739 SLC28A1O00337 649 aa14.68□□□□□ -0.06
DDB1-216ENST00000539739 TNFSF15O95150 251 aa14.68□□□□□ -0.06
DDB1-216ENST00000539739 KITP10721 976 aa14.68□□□□□ -0.06
DDB1-216ENST00000539739 HTR6P50406 440 aa14.68□□□□□ -0.06
DDB1-216ENST00000539739 CUL3Q13618 768 aa14.68□□□□□ -0.06
DDB1-216ENST00000539739 UGT3A2Q3SY77 523 aa14.68□□□□□ -0.06
DDB1-216ENST00000539739 DEPDC1Q5TB30 811 aa14.68□□□□□ -0.06
DDB1-216ENST00000539739 TRIM40Q6P9F5 258 aa14.68□□□□□ -0.06
DDB1-216ENST00000539739 SCIMPQ6UWF3 145 aa14.68□□□□□ -0.06
DDB1-216ENST00000539739 RNF165Q6ZSG1 346 aa14.68□□□□□ -0.06
DDB1-216ENST00000539739 RNF175Q8N4F7 328 aa14.68□□□□□ -0.06
DDB1-216ENST00000539739 HBEGFQ99075 208 aa14.68□□□□□ -0.06
DDB1-216ENST00000539739 B3GNT4Q9C0J1 378 aa14.68□□□□□ -0.06
DDB1-216ENST00000539739 OR51B5Q9H339 312 aa14.68□□□□□ -0.06
DDB1-216ENST00000539739 CUTCQ9NTM9 273 aa14.68□□□□□ -0.06
DDB1-216ENST00000539739 TXLNGQ9NUQ3 528 aa14.68□□□□□ -0.06
DDB1-216ENST00000539739 AHSPQ9NZD4 102 aa14.68□□□□□ -0.06
DDB1-216ENST00000539739 VTI1BQ9UEU0 232 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms