RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 AUTS2Q8WXX7 1259 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 KCNJ9Q92806 393 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 TWNKQ96RR1 684 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 METTL8Q9H825 291 aaKnown RBP6.28□□□□□ -1.4
LSAMP-207ENST00000539563 PRODH2Q9UF12 536 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 LAMP5Q9UJQ1 280 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 WNT6Q9Y6F9 365 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 CPED1A4D0V7 1026 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 OR5K4A6NMS3 321 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 A8MUA0 341 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 BHMG1C9JSJ3 638 aaPredicted RBP6.28□□□□□ -1.4
LSAMP-207ENST00000539563 NUAK1O60285 661 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 PFKLP17858 780 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 SLC3A1Q07837 685 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 PON3Q15166 354 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 OCLNQ16625 522 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 C4orf46Q504U0 113 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 THOC7Q6I9Y2 204 aaKnown RBP6.28□□□□□ -1.4
LSAMP-207ENST00000539563 REEP3Q6NUK4 255 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 NANOGNBQ7Z5D8 188 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 PDSS2Q86YH6 399 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 PRSS58Q8IYP2 241 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 TMEM156Q8N614 296 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 SETD7Q8WTS6 366 aaKnown RBP6.28□□□□□ -1.4
LSAMP-207ENST00000539563 TMEM234Q8WY98 164 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 EZH1Q92800 747 aaPredicted RBP6.28□□□□□ -1.4
LSAMP-207ENST00000539563 AIFM2Q9BRQ8 373 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 METTL7AQ9H8H3 244 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 CENPMQ9NSP4 180 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 DKK3Q9UBP4 350 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 SLC2A6Q9UGQ3 507 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 GLS2Q9UI32 602 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 PTBP2Q9UKA9 531 aaKnown RBP6.28□□□□□ -1.4
LSAMP-207ENST00000539563 CRYBG1Q9Y4K1 1723 aa6.27□□□□□ -1.4
LSAMP-207ENST00000539563 EME2A4GXA9 379 aaPredicted RBP6.27□□□□□ -1.4
LSAMP-207ENST00000539563 NFKBIEO00221 500 aa6.27□□□□□ -1.4
LSAMP-207ENST00000539563 HOXD8P13378 290 aaPredicted RBP6.27□□□□□ -1.4
LSAMP-207ENST00000539563 GJA1P17302 382 aa6.27□□□□□ -1.4
LSAMP-207ENST00000539563 FPR1P21462 350 aa6.27□□□□□ -1.4
LSAMP-207ENST00000539563 F8A1P23610 371 aa6.27□□□□□ -1.4
LSAMP-207ENST00000539563 DCKP27707 260 aa6.27□□□□□ -1.4
LSAMP-207ENST00000539563 GPX6P59796 221 aa6.27□□□□□ -1.4
LSAMP-207ENST00000539563 FAM214AQ32MH5 1076 aa6.27□□□□□ -1.4
LSAMP-207ENST00000539563 PTCHD3Q3KNS1 767 aa6.27□□□□□ -1.4
LSAMP-207ENST00000539563 PRRT3Q5FWE3 981 aa6.27□□□□□ -1.4
LSAMP-207ENST00000539563 COLEC12Q5KU26 742 aa6.27□□□□□ -1.4
LSAMP-207ENST00000539563 MEDAGQ5VYS4 303 aa6.27□□□□□ -1.4
LSAMP-207ENST00000539563 ATG9BQ674R7 924 aa6.27□□□□□ -1.4
LSAMP-207ENST00000539563 SLC2A7Q6PXP3 512 aa6.27□□□□□ -1.4
LSAMP-207ENST00000539563 MARCH9Q86YJ5 346 aa6.27□□□□□ -1.4
LSAMP-207ENST00000539563 OR8J3Q8NGG0 315 aa6.27□□□□□ -1.4
LSAMP-207ENST00000539563 PELOQ9BRX2 385 aaKnown RBP6.27□□□□□ -1.4
LSAMP-207ENST00000539563 KLRF1Q9NZS2 232 aa6.27□□□□□ -1.4
LSAMP-207ENST00000539563 TMEM9Q9P0T7 183 aa6.27□□□□□ -1.4
LSAMP-207ENST00000539563 GRHPRQ9UBQ7 328 aa6.27□□□□□ -1.4
LSAMP-207ENST00000539563 BAIAP2Q9UQB8 552 aa6.27□□□□□ -1.4
LSAMP-207ENST00000539563 RNF11Q9Y3C5 154 aa6.27□□□□□ -1.4
LSAMP-207ENST00000539563 CMAHPQ9Y471 501 aa6.27□□□□□ -1.4
LSAMP-207ENST00000539563 FAM170BA6NMN3 283 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 J3QLW9 94 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 TULP2O00295 520 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 ZNF19P17023 458 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 PVALBP20472 110 aaPredicted RBP6.27□□□□□ -1.41
LSAMP-207ENST00000539563 OXTRP30559 389 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 OR12D2P58182 307 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 WDR45BQ5MNZ6 344 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 CEP97Q8IW35 865 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 ZNF384Q8TF68 577 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 S100A16Q96FQ6 103 aaKnown RBP6.27□□□□□ -1.41
LSAMP-207ENST00000539563 CCDC115Q96NT0 180 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 PKP2Q99959 881 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 RPF2Q9H7B2 306 aaKnown RBP6.27□□□□□ -1.41
LSAMP-207ENST00000539563 PTGES2Q9H7Z7 377 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 SEC61A2Q9H9S3 476 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 CTPS2Q9NRF8 586 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 EIF3KQ9UBQ5 218 aaKnown RBP6.27□□□□□ -1.41
LSAMP-207ENST00000539563 WDR45Q9Y484 360 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 GMEB1Q9Y692 573 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 WASF2Q9Y6W5 498 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 A0A1B0GVC2 190 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 KANTRA0A1W2PQU2 76 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 HEXBP07686 556 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 G6PDP11413 515 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 KCNC1P48547 511 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 SUOXP51687 545 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 RBM20Q5T481 1227 aaKnown RBP6.27□□□□□ -1.41
LSAMP-207ENST00000539563 NAPRTQ6XQN6 538 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 KLHDC7BQ96G42 594 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 LRCH3Q96II8 777 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 FRMD6Q96NE9 622 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 TMED9Q9BVK6 235 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 DCSTAMPQ9H295 470 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 SFXN1Q9H9B4 322 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 FAM221BA6H8Z2 402 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 GNB5O14775 395 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 TBX1O43435 398 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 AOC2O75106 756 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 HTR1AP08908 422 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 ACRV1P26436 265 aa6.27□□□□□ -1.41
LSAMP-207ENST00000539563 ITPRIPL2Q3MIP1 535 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms