RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 OR7G3Q8NG95 312 aa16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 TMEM74Q96NL1 305 aa16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 OR2M4Q96R27 311 aa16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 SEPHS2Q99611 448 aa16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 SCHIP1Q9P0W5 487 aaPredicted RBP16.41■□□□□ 0.22
PCDHB17P-201ENST00000539533 FAM234BA2RU67 622 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 CCDC154A6NI56 674 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 H0YAE9 185 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 ERGP11308 486 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 BCKDHAP12694 445 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 HTR1BP28222 390 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 POLR2IP36954 125 aaKnown RBP16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 LRRC32Q14392 662 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 MOGQ16653 247 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 USP39Q53GS9 565 aaKnown RBP16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 PRAMEF14Q5SWL7 426 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 PRAMEF13Q5VWM6 474 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 NANOGP8Q6NSW7 305 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 OR13F1Q8NGS4 319 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 CLHC1Q8NHS4 586 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 CCL4L1Q8NHW4 92 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 SLC5A11Q8WWX8 675 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 BIRC7Q96CA5 298 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 CMTM7Q96FZ5 175 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 CHID1Q9BWS9 393 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 SPNS1Q9H2V7 528 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 SLAMF8Q9P0V8 285 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 USP22Q9UPT9 525 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 PCDHGA11Q9Y5H2 935 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 V9GYQ6 96 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 SERTM1A2A2V5 107 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 MAGEB17A8MXT2 336 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 KCNJ13O60928 360 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 APBB3O95704 486 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 C1GALT1C1LP0DN25 315 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 PCNAP12004 261 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 PXNP49023 591 aaPredicted RBP16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 DGKQP52824 942 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 NFATC3Q12968 1075 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 UAP1L1Q3KQV9 507 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 CACHD1Q5VU97 1274 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 ATG9BQ674R7 924 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 ZNF773Q6PK81 442 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 Q6ZSR6 202 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 SIX5Q8N196 739 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 KRTCAP2Q8N6L1 136 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 HUS1BQ8NHY5 278 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 NEURL2Q9BR09 285 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 TRNAU1APQ9NX07 287 aaKnown RBP16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 WSB2Q9NYS7 404 aaPredicted RBP16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 TBC1D29Q9UFV1 150 aa16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 LEF1Q9UJU2 399 aaPredicted RBP16.4■□□□□ 0.22
PCDHB17P-201ENST00000539533 PCM1Q15154 2024 aa16.39■□□□□ 0.21
PCDHB17P-201ENST00000539533 ETHE1O95571 254 aa16.39■□□□□ 0.21
PCDHB17P-201ENST00000539533 EML2O95834 649 aa16.39■□□□□ 0.21
PCDHB17P-201ENST00000539533 ALBP02768 609 aa16.39■□□□□ 0.21
PCDHB17P-201ENST00000539533 MATN1P21941 496 aa16.39■□□□□ 0.21
PCDHB17P-201ENST00000539533 JAK1P23458 1154 aa16.39■□□□□ 0.21
PCDHB17P-201ENST00000539533 PRPH2P23942 346 aa16.39■□□□□ 0.21
PCDHB17P-201ENST00000539533 HRH2P25021 359 aa16.39■□□□□ 0.21
PCDHB17P-201ENST00000539533 STARD6P59095 220 aa16.39■□□□□ 0.21
PCDHB17P-201ENST00000539533 SLBPQ14493 270 aaKnown RBP eCLIP16.39■□□□□ 0.21
PCDHB17P-201ENST00000539533 CYP2A13Q16696 494 aa16.39■□□□□ 0.21
PCDHB17P-201ENST00000539533 KIAA0895LQ68EN5 471 aa16.39■□□□□ 0.21
PCDHB17P-201ENST00000539533 NXPE4Q6UWF7 544 aa16.39■□□□□ 0.21
PCDHB17P-201ENST00000539533 LINC01555Q8NAE3 123 aa16.39■□□□□ 0.21
PCDHB17P-201ENST00000539533 SETD7Q8WTS6 366 aaKnown RBP16.39■□□□□ 0.21
PCDHB17P-201ENST00000539533 APOLD1Q96LR9 279 aa16.39■□□□□ 0.21
PCDHB17P-201ENST00000539533 CAMK1GQ96NX5 476 aa16.39■□□□□ 0.21
PCDHB17P-201ENST00000539533 BDH2Q9BUT1 245 aa16.39■□□□□ 0.21
PCDHB17P-201ENST00000539533 TMEM168Q9H0V1 697 aa16.39■□□□□ 0.21
PCDHB17P-201ENST00000539533 XKR8Q9H6D3 395 aa16.39■□□□□ 0.21
PCDHB17P-201ENST00000539533 SPATA6Q9NWH7 488 aaPredicted RBP16.39■□□□□ 0.21
PCDHB17P-201ENST00000539533 WNT16Q9UBV4 365 aa16.39■□□□□ 0.21
PCDHB17P-201ENST00000539533 TAC3Q9UHF0 121 aa16.39■□□□□ 0.21
PCDHB17P-201ENST00000539533 MRPS17Q9Y2R5 130 aaKnown RBP16.39■□□□□ 0.21
PCDHB17P-201ENST00000539533 CDH1P12830 882 aa16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 ZNF182P17025 639 aaPredicted RBP16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 ZNF24P17028 368 aa16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 AMD1P17707 334 aa16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 CCNA2P20248 432 aa16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 EEF1B2P24534 225 aaKnown RBP16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 TACR1P25103 407 aa16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 PSMB5P28074 263 aa16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 HTR1EP28566 365 aa16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 BMXP51813 675 aa16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 MAPK10P53779 464 aa16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 TMBIM6P55061 237 aa16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 ARHGAP19Q14CB8 494 aa16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 SF1Q15637 639 aaKnown RBP16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 OTUD3Q5T2D3 398 aaPredicted RBP16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 MED27Q6P2C8 311 aa16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 ADHFE1Q8IWW8 467 aa16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 ZNF740Q8NDX6 193 aa16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 OR13H1Q8NG92 308 aa16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 WDR34Q96EX3 536 aa16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 RNF145Q96MT1 663 aa16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 MUS81Q96NY9 551 aa16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 NANOGQ9H9S0 305 aa16.38■□□□□ 0.21
PCDHB17P-201ENST00000539533 FANCEQ9HB96 536 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms