RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 NUDCD3Q8IVD9 361 aa11.9□□□□□ -0.5
CLSTN3-208ENST00000538933 ACBD4Q8NC06 268 aa11.9□□□□□ -0.5
CLSTN3-208ENST00000538933 OR9A1PQ8NGU1 263 aa11.9□□□□□ -0.5
CLSTN3-208ENST00000538933 OR2Y1Q8NGV0 311 aa11.9□□□□□ -0.5
CLSTN3-208ENST00000538933 PHF21BQ96EK2 531 aa11.9□□□□□ -0.5
CLSTN3-208ENST00000538933 CCDC138Q96M89 665 aa11.9□□□□□ -0.5
CLSTN3-208ENST00000538933 ATOH8Q96SQ7 321 aa11.9□□□□□ -0.5
CLSTN3-208ENST00000538933 RAB11FIP5Q9BXF6 653 aa11.9□□□□□ -0.5
CLSTN3-208ENST00000538933 OLAHQ9NV23 265 aa11.9□□□□□ -0.5
CLSTN3-208ENST00000538933 IKZF3Q9UKT9 509 aa11.9□□□□□ -0.5
CLSTN3-208ENST00000538933 EMCNQ9ULC0 261 aa11.9□□□□□ -0.5
CLSTN3-208ENST00000538933 PDE10AQ9Y233 779 aa11.9□□□□□ -0.5
CLSTN3-208ENST00000538933 PTRH2Q9Y3E5 179 aaKnown RBP11.9□□□□□ -0.5
CLSTN3-208ENST00000538933 TMEM150CB9EJG8 249 aa11.89□□□□□ -0.51
CLSTN3-208ENST00000538933 C9J4A7 227 aa11.89□□□□□ -0.51
CLSTN3-208ENST00000538933 H3BMH7 237 aa11.89□□□□□ -0.51
CLSTN3-208ENST00000538933 CCL21O00585 134 aa11.89□□□□□ -0.51
CLSTN3-208ENST00000538933 ZNF749O43361 778 aa11.89□□□□□ -0.51
CLSTN3-208ENST00000538933 SERPINB4P48594 390 aa11.89□□□□□ -0.51
CLSTN3-208ENST00000538933 CDKL1Q00532 357 aa11.89□□□□□ -0.51
CLSTN3-208ENST00000538933 AIMP2Q13155 320 aaKnown RBP11.89□□□□□ -0.51
CLSTN3-208ENST00000538933 PFKFB4Q16877 469 aa11.89□□□□□ -0.51
CLSTN3-208ENST00000538933 CFAP157Q5JU67 520 aa11.89□□□□□ -0.51
CLSTN3-208ENST00000538933 SULT1C3Q6IMI6 304 aa11.89□□□□□ -0.51
CLSTN3-208ENST00000538933 XKRXQ6PP77 449 aa11.89□□□□□ -0.51
CLSTN3-208ENST00000538933 RPTNQ6XPR3 784 aa11.89□□□□□ -0.51
CLSTN3-208ENST00000538933 TRIM42Q8IWZ5 723 aa11.89□□□□□ -0.51
CLSTN3-208ENST00000538933 BCORP1Q8N888 145 aa11.89□□□□□ -0.51
CLSTN3-208ENST00000538933 PTGR2Q8N8N7 351 aaPredicted RBP11.89□□□□□ -0.51
CLSTN3-208ENST00000538933 GBP5Q96PP8 586 aa11.89□□□□□ -0.51
CLSTN3-208ENST00000538933 TAAR6Q96RI8 345 aa11.89□□□□□ -0.51
CLSTN3-208ENST00000538933 MCCC2Q9HCC0 563 aa11.89□□□□□ -0.51
CLSTN3-208ENST00000538933 ABCF3Q9NUQ8 709 aa11.89□□□□□ -0.51
CLSTN3-208ENST00000538933 SOHLH2Q9NX45 425 aa11.89□□□□□ -0.51
CLSTN3-208ENST00000538933 CIDEBQ9UHD4 219 aa11.89□□□□□ -0.51
CLSTN3-208ENST00000538933 PLAGL1Q9UM63 463 aa11.89□□□□□ -0.51
CLSTN3-208ENST00000538933 ANGPTL3Q9Y5C1 460 aa11.89□□□□□ -0.51
CLSTN3-208ENST00000538933 HRNRQ86YZ3 2850 aaPredicted RBP11.88□□□□□ -0.51
CLSTN3-208ENST00000538933 OR6C74A6NCV1 312 aa11.88□□□□□ -0.51
CLSTN3-208ENST00000538933 A8MT66 165 aa11.88□□□□□ -0.51
CLSTN3-208ENST00000538933 POLR3GO15318 223 aaPredicted RBP11.88□□□□□ -0.51
CLSTN3-208ENST00000538933 NADKO95544 446 aaPredicted RBP11.88□□□□□ -0.51
CLSTN3-208ENST00000538933 BPGMP07738 259 aa11.88□□□□□ -0.51
CLSTN3-208ENST00000538933 AGXTP21549 392 aa11.88□□□□□ -0.51
CLSTN3-208ENST00000538933 HSD17B2P37059 387 aa11.88□□□□□ -0.51
CLSTN3-208ENST00000538933 ARL1P40616 181 aaPredicted RBP11.88□□□□□ -0.51
CLSTN3-208ENST00000538933 CA7P43166 264 aa11.88□□□□□ -0.51
CLSTN3-208ENST00000538933 HNMTP50135 292 aa11.88□□□□□ -0.51
CLSTN3-208ENST00000538933 ALDH18A1P54886 795 aaKnown RBP11.88□□□□□ -0.51
CLSTN3-208ENST00000538933 ADORA2A-AS1P86434 159 aa11.88□□□□□ -0.51
CLSTN3-208ENST00000538933 TLR1Q15399 786 aa11.88□□□□□ -0.51
CLSTN3-208ENST00000538933 PPP1R3AQ16821 1122 aa11.88□□□□□ -0.51
CLSTN3-208ENST00000538933 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.88□□□□□ -0.51
CLSTN3-208ENST00000538933 THEMIS2Q5TEJ8 643 aa11.88□□□□□ -0.51
CLSTN3-208ENST00000538933 MLIPQ5VWP3 458 aa11.88□□□□□ -0.51
CLSTN3-208ENST00000538933 LIPMQ5VYY2 423 aa11.88□□□□□ -0.51
CLSTN3-208ENST00000538933 MRPL14Q6P1L8 145 aaKnown RBP11.88□□□□□ -0.51
CLSTN3-208ENST00000538933 FAM180AQ6UWF9 173 aa11.88□□□□□ -0.51
CLSTN3-208ENST00000538933 MBOAT1Q6ZNC8 495 aa11.88□□□□□ -0.51
CLSTN3-208ENST00000538933 OOSP2Q86WS3 158 aa11.88□□□□□ -0.51
CLSTN3-208ENST00000538933 CCNYL1Q8N7R7 359 aa11.88□□□□□ -0.51
CLSTN3-208ENST00000538933 FBXO15Q8NCQ5 510 aaPredicted RBP11.88□□□□□ -0.51
CLSTN3-208ENST00000538933 CATSPER1Q8NEC5 780 aa11.88□□□□□ -0.51
CLSTN3-208ENST00000538933 LCN9Q8WX39 176 aa11.88□□□□□ -0.51
CLSTN3-208ENST00000538933 PKP4Q99569 1192 aa11.88□□□□□ -0.51
CLSTN3-208ENST00000538933 FANCEQ9HB96 536 aa11.88□□□□□ -0.51
CLSTN3-208ENST00000538933 C1GALT1Q9NS00 363 aa11.88□□□□□ -0.51
CLSTN3-208ENST00000538933 SPATA7Q9P0W8 599 aa11.88□□□□□ -0.51
CLSTN3-208ENST00000538933 SUCOQ9UBS9 1254 aaKnown RBP11.88□□□□□ -0.51
CLSTN3-208ENST00000538933 SERTAD3Q9UJW9 196 aa11.88□□□□□ -0.51
CLSTN3-208ENST00000538933 POMT2Q9UKY4 750 aa11.88□□□□□ -0.51
CLSTN3-208ENST00000538933 TNPO3Q9Y5L0 923 aaKnown RBP11.88□□□□□ -0.51
CLSTN3-208ENST00000538933 JMJD1CQ15652 2540 aa11.87□□□□□ -0.51
CLSTN3-208ENST00000538933 COL6A5A8TX70 2615 aa11.87□□□□□ -0.51
CLSTN3-208ENST00000538933 TRGV8A0A0C4DH27 118 aa11.87□□□□□ -0.51
CLSTN3-208ENST00000538933 MYO1CO00159 1063 aa11.87□□□□□ -0.51
CLSTN3-208ENST00000538933 BIRC5O15392 142 aa11.87□□□□□ -0.51
CLSTN3-208ENST00000538933 DLX3O60479 287 aa11.87□□□□□ -0.51
CLSTN3-208ENST00000538933 CCNT2O60583 730 aaKnown RBP11.87□□□□□ -0.51
CLSTN3-208ENST00000538933 TRIM13O60858 407 aa11.87□□□□□ -0.51
CLSTN3-208ENST00000538933 H2AFYO75367 372 aaKnown RBP11.87□□□□□ -0.51
CLSTN3-208ENST00000538933 CD99P14209 185 aa11.87□□□□□ -0.51
CLSTN3-208ENST00000538933 EEF1DP29692 281 aaKnown RBP11.87□□□□□ -0.51
CLSTN3-208ENST00000538933 ALDH3A1P30838 453 aa11.87□□□□□ -0.51
CLSTN3-208ENST00000538933 SHMT2P34897 504 aa11.87□□□□□ -0.51
CLSTN3-208ENST00000538933 FOLR3P41439 243 aa11.87□□□□□ -0.51
CLSTN3-208ENST00000538933 ETV4P43268 484 aa11.87□□□□□ -0.51
CLSTN3-208ENST00000538933 KCNC1P48547 511 aa11.87□□□□□ -0.51
CLSTN3-208ENST00000538933 HSPA7P48741 367 aa11.87□□□□□ -0.51
CLSTN3-208ENST00000538933 PRKAA2P54646 552 aa11.87□□□□□ -0.51
CLSTN3-208ENST00000538933 TLE4Q04727 773 aa11.87□□□□□ -0.51
CLSTN3-208ENST00000538933 MPP2Q14168 576 aa11.87□□□□□ -0.51
CLSTN3-208ENST00000538933 PCLAFQ15004 111 aa11.87□□□□□ -0.51
CLSTN3-208ENST00000538933 SETDB1Q15047 1291 aa11.87□□□□□ -0.51
CLSTN3-208ENST00000538933 CCSMST1Q4G0I0 132 aa11.87□□□□□ -0.51
CLSTN3-208ENST00000538933 CDKL4Q5MAI5 379 aa11.87□□□□□ -0.51
CLSTN3-208ENST00000538933 AGAP7PQ5VUJ5 663 aa11.87□□□□□ -0.51
CLSTN3-208ENST00000538933 PRAMEF13Q5VWM6 474 aa11.87□□□□□ -0.51
CLSTN3-208ENST00000538933 ARMC6Q6NXE6 501 aa11.87□□□□□ -0.51
CLSTN3-208ENST00000538933 C10orf107Q8IVU9 208 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms