RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 PRICKLE3O43900 615 aaPredicted RBP19.52■□□□□ 0.72
DDX55-205ENST00000538744 CCNDBP1O95273 360 aa19.52■□□□□ 0.72
DDX55-205ENST00000538744 IL3P08700 152 aa19.52■□□□□ 0.72
DDX55-205ENST00000538744 AK4P27144 223 aaPredicted RBP19.52■□□□□ 0.72
DDX55-205ENST00000538744 SRP54P61011 504 aaKnown RBP19.52■□□□□ 0.72
DDX55-205ENST00000538744 MC1RQ01726 317 aa19.52■□□□□ 0.72
DDX55-205ENST00000538744 SKIV2LQ15477 1246 aaKnown RBP19.52■□□□□ 0.72
DDX55-205ENST00000538744 C6orf52Q5T4I8 152 aa19.52■□□□□ 0.72
DDX55-205ENST00000538744 ZCCHC8Q6NZY4 707 aaKnown RBP19.52■□□□□ 0.72
DDX55-205ENST00000538744 ZNF551Q7Z340 670 aaPredicted RBP19.52■□□□□ 0.72
DDX55-205ENST00000538744 TMEM145Q8NBT3 493 aa19.52■□□□□ 0.72
DDX55-205ENST00000538744 TTLQ8NG68 377 aa19.52■□□□□ 0.72
DDX55-205ENST00000538744 BDH2Q9BUT1 245 aa19.52■□□□□ 0.72
DDX55-205ENST00000538744 SPATA9Q9BWV2 254 aa19.52■□□□□ 0.72
DDX55-205ENST00000538744 TPT1P8Q9HAU6 139 aa19.52■□□□□ 0.72
DDX55-205ENST00000538744 OLAHQ9NV23 265 aa19.52■□□□□ 0.72
DDX55-205ENST00000538744 WBP11Q9Y2W2 641 aaKnown RBP19.52■□□□□ 0.72
DDX55-205ENST00000538744 PRAMEF33A0A0G2JMD5 474 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 ARHGAP10A1A4S6 786 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 C1orf226A1L170 272 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 NDUFS4O43181 175 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 DEAF1O75398 565 aaPredicted RBP19.51■□□□□ 0.71
DDX55-205ENST00000538744 CLEC3AO75596 197 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 RASGRP1O95267 797 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 MT-ND1P03886 318 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 HOXB6P17509 224 aaKnown RBP19.51■□□□□ 0.71
DDX55-205ENST00000538744 SHMT2P34897 504 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 BSGP35613 385 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 GRK3P35626 688 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 ACTR1BP42025 376 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 CCR5P51681 352 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 ACTR1AP61163 376 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 CCDC85BQ15834 202 aaPredicted RBP19.51■□□□□ 0.71
DDX55-205ENST00000538744 CPZQ66K79 652 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 ENPP6Q6UWR7 440 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 SPRED1Q7Z699 444 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 CBR4Q8N4T8 237 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 GOT1L1Q8NHS2 421 aaPredicted RBP19.51■□□□□ 0.71
DDX55-205ENST00000538744 SLC47A1Q96FL8 570 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 ZNF717Q9BY31 904 aaPredicted RBP19.51■□□□□ 0.71
DDX55-205ENST00000538744 TMEM184CQ9NVA4 438 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 DLGAP2Q9P1A6 1054 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 OAZ3Q9UMX2 235 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 PCDHGB4Q9UN71 923 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 PRAMEF26H0Y7S4 382 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 CAPN5O15484 640 aaPredicted RBP19.51■□□□□ 0.71
DDX55-205ENST00000538744 CLOCKO15516 846 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 GPR37L1O60883 481 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 EML2O95834 649 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 IL1RNP18510 177 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 MAPK12P53778 367 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 VMACQ2NL98 169 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 ALG11Q2TAA5 492 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 KIAA0895LQ68EN5 471 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 SLC30A9Q6PML9 568 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 ZNF852Q6ZMS4 543 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 ZZZ3Q8IYH5 903 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 FAM86B1Q8N7N1 296 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 NETO1Q8TDF5 533 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 RGMAQ96B86 450 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 VPS50Q96JG6 964 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 TMEM168Q9H0V1 697 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 C6orf106Q9H6K1 298 aaPredicted RBP19.51■□□□□ 0.71
DDX55-205ENST00000538744 MAGIXQ9H6Y5 334 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 SLC6A20Q9NP91 592 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 MIEF1Q9NQG6 463 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 AASDHPPTQ9NRN7 309 aa19.51■□□□□ 0.71
DDX55-205ENST00000538744 TRNAU1APQ9NX07 287 aaKnown RBP19.51■□□□□ 0.71
DDX55-205ENST00000538744 LCMT2O60294 686 aaKnown RBP19.5■□□□□ 0.71
DDX55-205ENST00000538744 SMNDC1O75940 238 aaKnown RBP eCLIP19.5■□□□□ 0.71
DDX55-205ENST00000538744 PRKD3O94806 890 aa19.5■□□□□ 0.71
DDX55-205ENST00000538744 KCNK5O95279 499 aa19.5■□□□□ 0.71
DDX55-205ENST00000538744 RASAL1O95294 804 aa19.5■□□□□ 0.71
DDX55-205ENST00000538744 SERPINA1P01009 418 aa19.5■□□□□ 0.71
DDX55-205ENST00000538744 C1QCP02747 245 aa19.5■□□□□ 0.71
DDX55-205ENST00000538744 IGHV4-34P06331 123 aa19.5■□□□□ 0.71
DDX55-205ENST00000538744 CHRNB1P11230 501 aa19.5■□□□□ 0.71
DDX55-205ENST00000538744 CMPK1P30085 196 aa19.5■□□□□ 0.71
DDX55-205ENST00000538744 PEBP1P30086 187 aaKnown RBP19.5■□□□□ 0.71
DDX55-205ENST00000538744 RABIFP47224 123 aa19.5■□□□□ 0.71
DDX55-205ENST00000538744 CHN2P52757 468 aa19.5■□□□□ 0.71
DDX55-205ENST00000538744 GAB1Q13480 694 aa19.5■□□□□ 0.71
DDX55-205ENST00000538744 TCEA2Q15560 299 aa19.5■□□□□ 0.71
DDX55-205ENST00000538744 SMAD2Q15796 467 aaKnown RBP19.5■□□□□ 0.71
DDX55-205ENST00000538744 UGT2A3Q6UWM9 527 aa19.5■□□□□ 0.71
DDX55-205ENST00000538744 Q6ZSR6 202 aa19.5■□□□□ 0.71
DDX55-205ENST00000538744 SYT13Q7L8C5 426 aa19.5■□□□□ 0.71
DDX55-205ENST00000538744 ABI3BPQ7Z7G0 1075 aa19.5■□□□□ 0.71
DDX55-205ENST00000538744 NUDT13Q86X67 352 aa19.5■□□□□ 0.71
DDX55-205ENST00000538744 PLD3Q8IV08 490 aa19.5■□□□□ 0.71
DDX55-205ENST00000538744 TBC1D19Q8N5T2 526 aa19.5■□□□□ 0.71
DDX55-205ENST00000538744 MFSD2AQ8NA29 543 aa19.5■□□□□ 0.71
DDX55-205ENST00000538744 OR2L3Q8NG85 312 aa19.5■□□□□ 0.71
DDX55-205ENST00000538744 CCL4L1Q8NHW4 92 aa19.5■□□□□ 0.71
DDX55-205ENST00000538744 PNPT1Q8TCS8 783 aaKnown RBP19.5■□□□□ 0.71
DDX55-205ENST00000538744 ZFP90Q8TF47 636 aa19.5■□□□□ 0.71
DDX55-205ENST00000538744 LCN9Q8WX39 176 aa19.5■□□□□ 0.71
DDX55-205ENST00000538744 CNBD2Q96M20 576 aa19.5■□□□□ 0.71
DDX55-205ENST00000538744 OR6C2Q9NZP2 312 aa19.5■□□□□ 0.71
DDX55-205ENST00000538744 ADAM29Q9UKF5 820 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms