RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 PTGER4P35408 488 aa8.13□□□□□ -1.11
DDB1-212ENST00000538470 SCTRP47872 440 aa8.13□□□□□ -1.11
DDB1-212ENST00000538470 OR4D2P58180 307 aa8.13□□□□□ -1.11
DDB1-212ENST00000538470 SLC26A5P58743 744 aa8.13□□□□□ -1.11
DDB1-212ENST00000538470 CDKL1Q00532 357 aa8.13□□□□□ -1.11
DDB1-212ENST00000538470 CSHL1Q14406 222 aa8.13□□□□□ -1.11
DDB1-212ENST00000538470 OR1C1Q15619 314 aa8.13□□□□□ -1.11
DDB1-212ENST00000538470 PPP1R3AQ16821 1122 aa8.13□□□□□ -1.11
DDB1-212ENST00000538470 MSS51Q4VC12 460 aa8.13□□□□□ -1.11
DDB1-212ENST00000538470 KRTCAP3Q53RY4 240 aa8.13□□□□□ -1.11
DDB1-212ENST00000538470 TEDDM1Q5T9Z0 273 aa8.13□□□□□ -1.11
DDB1-212ENST00000538470 SBSNQ6UWP8 590 aa8.13□□□□□ -1.11
DDB1-212ENST00000538470 BNC2Q6ZN30 1099 aaPredicted RBP8.13□□□□□ -1.11
DDB1-212ENST00000538470 TMPRSS11BQ86T26 416 aa8.13□□□□□ -1.11
DDB1-212ENST00000538470 NKAPQ8N5F7 415 aaKnown RBP8.13□□□□□ -1.11
DDB1-212ENST00000538470 ELP5Q8TE02 316 aa8.13□□□□□ -1.11
DDB1-212ENST00000538470 THAP3Q8WTV1 239 aaPredicted RBP8.13□□□□□ -1.11
DDB1-212ENST00000538470 ITLN2Q8WWU7 325 aaPredicted RBP8.13□□□□□ -1.11
DDB1-212ENST00000538470 TSLPQ969D9 159 aa8.13□□□□□ -1.11
DDB1-212ENST00000538470 NEIL2Q969S2 332 aa8.13□□□□□ -1.11
DDB1-212ENST00000538470 MARVELD3Q96A59 401 aa8.13□□□□□ -1.11
DDB1-212ENST00000538470 PYCR2Q96C36 320 aa8.13□□□□□ -1.11
DDB1-212ENST00000538470 MAGED4Q96JG8 741 aa8.13□□□□□ -1.11
DDB1-212ENST00000538470 GPR137Q96N19 417 aa8.13□□□□□ -1.11
DDB1-212ENST00000538470 FRMD6Q96NE9 622 aa8.13□□□□□ -1.11
DDB1-212ENST00000538470 OR4K3Q96R72 315 aa8.13□□□□□ -1.11
DDB1-212ENST00000538470 MACROD1Q9BQ69 325 aa8.13□□□□□ -1.11
DDB1-212ENST00000538470 AIF1LQ9BQI0 150 aa8.13□□□□□ -1.11
DDB1-212ENST00000538470 RBCK1Q9BYM8 510 aa8.13□□□□□ -1.11
DDB1-212ENST00000538470 SLC6A16Q9GZN6 736 aa8.13□□□□□ -1.11
DDB1-212ENST00000538470 DDX47Q9H0S4 455 aaKnown RBP8.13□□□□□ -1.11
DDB1-212ENST00000538470 PLAC1Q9HBJ0 212 aa8.13□□□□□ -1.11
DDB1-212ENST00000538470 PPANQ9NQ55 473 aaKnown RBP8.13□□□□□ -1.11
DDB1-212ENST00000538470 NSMCE4AQ9NXX6 385 aa8.13□□□□□ -1.11
DDB1-212ENST00000538470 ZFATQ9P243 1243 aa8.13□□□□□ -1.11
DDB1-212ENST00000538470 SLC17A6Q9P2U8 582 aa8.13□□□□□ -1.11
DDB1-212ENST00000538470 CHMP2BQ9UQN3 213 aa8.13□□□□□ -1.11
DDB1-212ENST00000538470 VWA7Q9Y334 891 aa8.13□□□□□ -1.11
DDB1-212ENST00000538470 TCRBV16S1A1N1A0A5B0 115 aa8.12□□□□□ -1.11
DDB1-212ENST00000538470 SAGE2PA6NJ88 616 aa8.12□□□□□ -1.11
DDB1-212ENST00000538470 PSMD12O00232 456 aaPredicted RBP8.12□□□□□ -1.11
DDB1-212ENST00000538470 CCL21O00585 134 aa8.12□□□□□ -1.11
DDB1-212ENST00000538470 SLC19A2O60779 497 aa8.12□□□□□ -1.11
DDB1-212ENST00000538470 CDC123O75794 336 aaPredicted RBP8.12□□□□□ -1.11
DDB1-212ENST00000538470 ZNF888P0CJ79 500 aaPredicted RBP8.12□□□□□ -1.11
DDB1-212ENST00000538470 RNH1P13489 461 aaKnown RBP8.12□□□□□ -1.11
DDB1-212ENST00000538470 AGAP20933 346 aa8.12□□□□□ -1.11
DDB1-212ENST00000538470 IVDP26440 423 aa8.12□□□□□ -1.11
DDB1-212ENST00000538470 EEF1DP29692 281 aaKnown RBP8.12□□□□□ -1.11
DDB1-212ENST00000538470 HPDP32754 393 aaPredicted RBP8.12□□□□□ -1.11
DDB1-212ENST00000538470 ELK3P41970 407 aa8.12□□□□□ -1.11
DDB1-212ENST00000538470 HNMTP50135 292 aa8.12□□□□□ -1.11
DDB1-212ENST00000538470 ARL4CP56559 192 aa8.12□□□□□ -1.11
DDB1-212ENST00000538470 PMP22Q01453 160 aa8.12□□□□□ -1.11
DDB1-212ENST00000538470 ALDH6A1Q02252 535 aaKnown RBP8.12□□□□□ -1.11
DDB1-212ENST00000538470 ACTN3Q08043 901 aaPredicted RBP8.12□□□□□ -1.11
DDB1-212ENST00000538470 MGAT5Q09328 741 aa8.12□□□□□ -1.11
DDB1-212ENST00000538470 TERF2Q15554 542 aa8.12□□□□□ -1.11
DDB1-212ENST00000538470 ZXDCQ2QGD7 858 aaPredicted RBP8.12□□□□□ -1.11
DDB1-212ENST00000538470 DEFB134Q4QY38 66 aa8.12□□□□□ -1.11
DDB1-212ENST00000538470 CATSPEREQ5SY80 951 aa8.12□□□□□ -1.11
DDB1-212ENST00000538470 Q6ZPB1 254 aaPredicted RBP8.12□□□□□ -1.11
DDB1-212ENST00000538470 ADAMTSL2Q86TH1 951 aa8.12□□□□□ -1.11
DDB1-212ENST00000538470 KLHDC8AQ8IYD2 350 aa8.12□□□□□ -1.11
DDB1-212ENST00000538470 ARMC10Q8N2F6 343 aa8.12□□□□□ -1.11
DDB1-212ENST00000538470 ARMC2Q8NEN0 867 aa8.12□□□□□ -1.11
DDB1-212ENST00000538470 TTLQ8NG68 377 aa8.12□□□□□ -1.11
DDB1-212ENST00000538470 OR5T3Q8NGG3 340 aa8.12□□□□□ -1.11
DDB1-212ENST00000538470 ADAMTS18Q8TE60 1221 aa8.12□□□□□ -1.11
DDB1-212ENST00000538470 UTP15Q8TED0 518 aaKnown RBP8.12□□□□□ -1.11
DDB1-212ENST00000538470 GAL3ST3Q96A11 431 aa8.12□□□□□ -1.11
DDB1-212ENST00000538470 MOCOSQ96EN8 888 aa8.12□□□□□ -1.11
DDB1-212ENST00000538470 CFAP36Q96G28 342 aa8.12□□□□□ -1.11
DDB1-212ENST00000538470 CCDC120Q96HB5 630 aa8.12□□□□□ -1.11
DDB1-212ENST00000538470 SEC16BQ96JE7 1060 aa8.12□□□□□ -1.11
DDB1-212ENST00000538470 SIGLEC12Q96PQ1 595 aa8.12□□□□□ -1.11
DDB1-212ENST00000538470 NPAS2Q99743 824 aa8.12□□□□□ -1.11
DDB1-212ENST00000538470 OLFM1Q99784 485 aa8.12□□□□□ -1.11
DDB1-212ENST00000538470 WDR83Q9BRX9 315 aaKnown RBP8.12□□□□□ -1.11
DDB1-212ENST00000538470 TRIM45Q9H8W5 580 aaPredicted RBP8.12□□□□□ -1.11
DDB1-212ENST00000538470 POPDC3Q9HBV1 291 aa8.12□□□□□ -1.11
DDB1-212ENST00000538470 CHST11Q9NPF2 352 aa8.12□□□□□ -1.11
DDB1-212ENST00000538470 MMACHCQ9Y4U1 282 aa8.12□□□□□ -1.11
DDB1-212ENST00000538470 OARD1Q9Y530 152 aa8.12□□□□□ -1.11
DDB1-212ENST00000538470 TEX264Q9Y6I9 313 aa8.12□□□□□ -1.11
DDB1-212ENST00000538470 KCNE2Q9Y6J6 123 aa8.12□□□□□ -1.11
DDB1-212ENST00000538470 CSMD1Q96PZ7 3565 aa8.11□□□□□ -1.11
DDB1-212ENST00000538470 A0A088AWK7 358 aa8.11□□□□□ -1.11
DDB1-212ENST00000538470 IGKV3D-11A0A0A0MRZ8 115 aa8.11□□□□□ -1.11
DDB1-212ENST00000538470 FAM95CA0A1B0GW59 222 aa8.11□□□□□ -1.11
DDB1-212ENST00000538470 ARHGAP10A1A4S6 786 aa8.11□□□□□ -1.11
DDB1-212ENST00000538470 NPEPPSL1A6NEC2 478 aa8.11□□□□□ -1.11
DDB1-212ENST00000538470 FCHO1O14526 889 aa8.11□□□□□ -1.11
DDB1-212ENST00000538470 CHST10O43529 356 aa8.11□□□□□ -1.11
DDB1-212ENST00000538470 NME2P1O60361 137 aa8.11□□□□□ -1.11
DDB1-212ENST00000538470 PRMT3O60678 531 aa8.11□□□□□ -1.11
DDB1-212ENST00000538470 NEURL1O76050 574 aa8.11□□□□□ -1.11
DDB1-212ENST00000538470 SEC31AO94979 1220 aaKnown RBP8.11□□□□□ -1.11
DDB1-212ENST00000538470 GUCA1CO95843 209 aa8.11□□□□□ -1.11
DDB1-212ENST00000538470 SERPIND1P05546 499 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms