RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 ZMIZ1Q9ULJ6 1067 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 AP3M1Q9Y2T2 418 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 GPC6Q9Y625 555 aaPredicted RBP3.43□□□□□ -1.86
PTPN22-211ENST00000538253 SLC22A7Q9Y694 548 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 COL5A1P20908 1838 aaPredicted RBP3.43□□□□□ -1.86
PTPN22-211ENST00000538253 ZDBF2Q9HCK1 2354 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 TM4SF5O14894 197 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 AURKAO14965 403 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 DSCR3O14972 297 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 B3GALT2O43825 422 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 BRINP1O60477 761 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 ICMTO60725 284 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 TRIM13O60858 407 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 NIPSNAP2O75323 286 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 HAUS5O94927 633 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 CLDN9O95484 217 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 HSPA4LO95757 839 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 CRYZL1O95825 349 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 SERPINA6P08185 405 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 IFI6P09912 130 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 ERGP11308 486 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 HOXB1P14653 301 aaPredicted RBP3.43□□□□□ -1.86
PTPN22-211ENST00000538253 TGM1P22735 817 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 AK4P27144 223 aaPredicted RBP3.43□□□□□ -1.86
PTPN22-211ENST00000538253 GSTT1P30711 240 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 SSTR1P30872 391 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 CASRP41180 1078 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 FOLR3P41439 243 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 TMED10P49755 219 aaKnown RBP3.43□□□□□ -1.86
PTPN22-211ENST00000538253 CLCN7P51798 805 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 METAP1P53582 386 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 TAS2R39P59534 338 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 DCDP81605 110 aaKnown RBP3.43□□□□□ -1.86
PTPN22-211ENST00000538253 PLIN5Q00G26 463 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 CFHR1Q03591 330 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 NAE1Q13564 534 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 SGCAQ16586 387 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 PDCD4Q53EL6 469 aaKnown RBP3.43□□□□□ -1.86
PTPN22-211ENST00000538253 GUSBP11Q6P575 273 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 RNF165Q6ZSG1 346 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 SYVN1Q86TM6 617 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 PRUNE1Q86TP1 453 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 NRROSQ86YC3 692 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 CPNE9Q8IYJ1 553 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 HORMAD2Q8N7B1 307 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 BCAS4Q8TDM0 211 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 UTP15Q8TED0 518 aaKnown RBP3.43□□□□□ -1.86
PTPN22-211ENST00000538253 AENQ8WTP8 325 aaKnown RBP3.43□□□□□ -1.86
PTPN22-211ENST00000538253 ARL5BQ96KC2 179 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 CCDC74BQ96LY2 380 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 PPP3R2Q96LZ3 170 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 SGPP1Q9BX95 441 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 RAD21L1Q9H4I0 556 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 PISDQ9UG56 409 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 SLC2A6Q9UGQ3 507 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 TUBD1Q9UJT1 453 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 POLHQ9Y253 713 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 CA5BQ9Y2D0 317 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 TMEM184BQ9Y519 407 aaPredicted RBP3.43□□□□□ -1.86
PTPN22-211ENST00000538253 SNX8Q9Y5X2 465 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 A0A1B0GX78 115 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 GOLGA8RI6L899 631 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 GAPDHSO14556 408 aaPredicted RBP3.43□□□□□ -1.86
PTPN22-211ENST00000538253 RGS14O43566 566 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 RAD1O60671 282 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 LYPLA1O75608 230 aaPredicted RBP3.43□□□□□ -1.86
PTPN22-211ENST00000538253 ATP6V1G2O95670 118 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 RNH1P13489 461 aaKnown RBP3.43□□□□□ -1.86
PTPN22-211ENST00000538253 CPA3P15088 417 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 UGT2B7P16662 529 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 POLR2CP19387 275 aaPredicted RBP3.43□□□□□ -1.86
PTPN22-211ENST00000538253 FBLP22087 321 aaKnown RBP3.43□□□□□ -1.86
PTPN22-211ENST00000538253 CD1CP29017 333 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 PRDX3P30048 256 aaKnown RBP3.43□□□□□ -1.86
PTPN22-211ENST00000538253 SERPINB4P48594 390 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 ETV1P50549 477 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 GPR85P60893 370 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 MPP1Q00013 466 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 FOXM1Q08050 763 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 SLC29A2Q14542 456 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 SHBQ15464 509 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 MAPRE2Q15555 327 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 RBBP7Q16576 425 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 ZNF542PQ5EBM4 170 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 ACSBG2Q5FVE4 666 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 CTSL3PQ5NE16 218 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 N4BP2L1Q5TBK1 243 aaPredicted RBP3.43□□□□□ -1.86
PTPN22-211ENST00000538253 BHLHB9Q6PI77 547 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 CNSTQ6PJW8 725 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 PAQR3Q6TCH7 311 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 CLEC2AQ6UVW9 174 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 SCIMPQ6UWF3 145 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 NXPE4Q6UWF7 544 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 THOC6Q86W42 341 aaKnown RBP3.43□□□□□ -1.86
PTPN22-211ENST00000538253 FAM129CQ86XR2 697 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 MCATQ8IVS2 390 aaKnown RBP3.43□□□□□ -1.86
PTPN22-211ENST00000538253 GPALPP1Q8IXQ4 340 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 FAM98AQ8NCA5 519 aaKnown RBP3.43□□□□□ -1.86
PTPN22-211ENST00000538253 ABHD11Q8NFV4 315 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 SUN3Q8TAQ9 357 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms