RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 RABEPKQ7Z6M1 372 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 KBTBD8Q8NFY9 601 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 KCNJ9Q92806 393 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 LRRC46Q96FV0 321 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 BOCQ9BWV1 1114 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 ZDHHC18Q9NUE0 388 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 GIMAP2Q9UG22 337 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 PHIPQ8WWQ0 1821 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 TP53I11O14683 189 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 RNF13O43567 381 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 EPOP01588 193 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 PFKLP17858 780 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 CD9P21926 228 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 CDKN2DP55273 166 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 HERC3Q15034 1050 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 RAET1LQ5VY80 246 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 NANOGNBQ7Z5D8 188 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 OR4N5Q8IXE1 308 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 NATD1Q8N6N6 113 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 AP3S1Q92572 193 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 ZNF689Q96CS4 500 aaPredicted RBP5.17□□□□□ -1.58
LRP6-203ENST00000538239 FIZ1Q96SL8 496 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 DSN1Q9H410 356 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 TBC1D17Q9HA65 648 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 FADS3Q9Y5Q0 445 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 PSAT1Q9Y617 370 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 E7EQ34 232 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 SSNA1O43805 119 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 AKAP8O43823 692 aaKnown RBP5.17□□□□□ -1.58
LRP6-203ENST00000538239 CHRM5P08912 532 aaPredicted RBP5.17□□□□□ -1.58
LRP6-203ENST00000538239 FUT4P22083 530 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 GRIN2CQ14957 1233 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 IRF4Q15306 451 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 C18orf21Q32NC0 220 aaPredicted RBP5.17□□□□□ -1.58
LRP6-203ENST00000538239 CRB2Q5IJ48 1285 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 METTL21CQ5VZV1 264 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 TMEM214Q6NUQ4 689 aaKnown RBP5.17□□□□□ -1.58
LRP6-203ENST00000538239 C15orf39Q6ZRI6 1047 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 GALNT10Q86SR1 603 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 NLGN4YQ8NFZ3 816 aaPredicted RBP5.17□□□□□ -1.58
LRP6-203ENST00000538239 F2RL3Q96RI0 385 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 TPK1Q9H3S4 243 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 MARCH4Q9P2E8 410 aaPredicted RBP5.17□□□□□ -1.58
LRP6-203ENST00000538239 A0A1B0GVT2 93 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 TRBC2A0A5B9 178 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 SMAD6O43541 496 aaKnown RBP5.17□□□□□ -1.58
LRP6-203ENST00000538239 HCRTR2O43614 444 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 RPP14O95059 124 aaKnown RBP5.17□□□□□ -1.58
LRP6-203ENST00000538239 HOXB6P17509 224 aaKnown RBP5.17□□□□□ -1.58
LRP6-203ENST00000538239 ZNF763Q0D2J5 394 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 KRT74Q7RTS7 529 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 ZDHHC14Q8IZN3 488 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 RAB8BQ92930 207 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 LRRC58Q96CX6 371 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 MRPL38Q96DV4 380 aaKnown RBP5.17□□□□□ -1.58
LRP6-203ENST00000538239 ADAD1Q96M93 576 aaKnown RBP5.17□□□□□ -1.58
LRP6-203ENST00000538239 NSUN5Q96P11 429 aaKnown RBP5.17□□□□□ -1.58
LRP6-203ENST00000538239 OR1F2PQ96R84 312 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 OR52B2Q96RD2 323 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 SH3GL3Q99963 347 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 SLC39A3Q9BRY0 314 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 ZNF395Q9H8N7 513 aaPredicted RBP5.17□□□□□ -1.58
LRP6-203ENST00000538239 CCNB1IP1Q9NPC3 277 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 RIMKLBQ9ULI2 386 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 MYH10P35580 1976 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 NPIPB15A6NHN6 443 aaPredicted RBP5.17□□□□□ -1.58
LRP6-203ENST00000538239 C11orf98E9PRG8 122 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 TRIM3O75382 744 aaPredicted RBP5.17□□□□□ -1.58
LRP6-203ENST00000538239 PSIP1O75475 530 aaKnown RBP5.17□□□□□ -1.58
LRP6-203ENST00000538239 CPNE6O95741 557 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 IFNA6P05013 189 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 IL3P08700 152 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 TMED10P49755 219 aaKnown RBP5.17□□□□□ -1.58
LRP6-203ENST00000538239 OR2B6P58173 313 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 GBX1Q14549 363 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 LIPJQ5W064 366 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 GPR153Q6NV75 609 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 AAGABQ6PD74 315 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 PLD6Q8N2A8 252 aaKnown RBP5.17□□□□□ -1.58
LRP6-203ENST00000538239 PLEKHG4BQ96PX9 1271 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 BHLHE41Q9C0J9 482 aaPredicted RBP5.17□□□□□ -1.58
LRP6-203ENST00000538239 PCDHAC1Q9H158 963 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 CLK4Q9HAZ1 481 aaKnown RBP5.17□□□□□ -1.58
LRP6-203ENST00000538239 ABCB9Q9NP78 766 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 ING3Q9NXR8 418 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 B4GALT7Q9UBV7 327 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 FETUBQ9UGM5 382 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 DAPL1A0PJW8 107 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 NPIPA2E9PIF3 369 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 NPIPA3F8WFD2 350 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 SOX1O00570 391 aaPredicted RBP5.17□□□□□ -1.58
LRP6-203ENST00000538239 SLC16A5O15375 505 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 RGS10O43665 173 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 CH25HO95992 272 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 NOVP48745 357 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 CDK6Q00534 326 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 PRPF38BQ5VTL8 546 aaKnown RBP5.17□□□□□ -1.58
LRP6-203ENST00000538239 KIAA0319Q5VV43 1072 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 SHISA6Q6ZSJ9 500 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 HTR3DQ70Z44 454 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms