RNA–Protein interactions for RNA: ENST00000537275.5

HMGA2-207, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,508 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-207ENST00000537275 SH3BGRLO75368 114 aa23.08■■□□□ 1.28
HMGA2-207ENST00000537275 GCGRP47871 477 aa23.08■■□□□ 1.28
HMGA2-207ENST00000537275 MAPK10P53779 464 aa23.08■■□□□ 1.28
HMGA2-207ENST00000537275 SEC24CP53992 1094 aa23.08■■□□□ 1.28
HMGA2-207ENST00000537275 TOR1AIP1Q5JTV8 583 aa23.08■■□□□ 1.28
HMGA2-207ENST00000537275 MAVSQ7Z434 540 aa23.08■■□□□ 1.28
HMGA2-207ENST00000537275 OR2T11Q8NH01 316 aa23.08■■□□□ 1.28
HMGA2-207ENST00000537275 CTRCQ99895 268 aa23.08■■□□□ 1.28
HMGA2-207ENST00000537275 VPS29Q9UBQ0 182 aa23.08■■□□□ 1.28
HMGA2-207ENST00000537275 SLC12A4Q9UP95 1085 aa23.08■■□□□ 1.28
HMGA2-207ENST00000537275 SATB2Q9UPW6 733 aa23.08■■□□□ 1.28
HMGA2-207ENST00000537275 HYKKA2RU49 373 aa23.07■■□□□ 1.28
HMGA2-207ENST00000537275 URADA6NGE7 173 aa23.07■■□□□ 1.28
HMGA2-207ENST00000537275 NPIPB8E9PQR5 432 aa23.07■■□□□ 1.28
HMGA2-207ENST00000537275 SMIM10L1P0DMW3 83 aa23.07■■□□□ 1.28
HMGA2-207ENST00000537275 ALOX15P16050 662 aaPredicted RBP23.07■■□□□ 1.28
HMGA2-207ENST00000537275 RAB15P59190 212 aa23.07■■□□□ 1.28
HMGA2-207ENST00000537275 SNRPNP63162 240 aaKnown RBP23.07■■□□□ 1.28
HMGA2-207ENST00000537275 TMEM35AQ53FP2 167 aa23.07■■□□□ 1.28
HMGA2-207ENST00000537275 PRAMEF17Q5VTA0 474 aa23.07■■□□□ 1.28
HMGA2-207ENST00000537275 GARNL3Q5VVW2 1013 aa23.07■■□□□ 1.28
HMGA2-207ENST00000537275 OR2L5Q8NG80 312 aa23.07■■□□□ 1.28
HMGA2-207ENST00000537275 SMIM10Q96HG1 83 aa23.07■■□□□ 1.28
HMGA2-207ENST00000537275 MEAF6Q9HAF1 191 aa23.07■■□□□ 1.28
HMGA2-207ENST00000537275 NMRK1Q9NWW6 199 aa23.07■■□□□ 1.28
HMGA2-207ENST00000537275 SPTBP11277 2137 aa23.07■■□□□ 1.28
HMGA2-207ENST00000537275 GMNCA6NCL1 334 aa23.06■■□□□ 1.28
HMGA2-207ENST00000537275 TRPC5OSA6NMA1 111 aa23.06■■□□□ 1.28
HMGA2-207ENST00000537275 RGS14O43566 566 aa23.06■■□□□ 1.28
HMGA2-207ENST00000537275 TIAF1O95411 115 aa23.06■■□□□ 1.28
HMGA2-207ENST00000537275 IMPG1Q17R60 797 aa23.06■■□□□ 1.28
HMGA2-207ENST00000537275 FAM214AQ32MH5 1076 aa23.06■■□□□ 1.28
HMGA2-207ENST00000537275 LARP7Q4G0J3 582 aaKnown RBP eCLIP23.06■■□□□ 1.28
HMGA2-207ENST00000537275 CGB2Q6NT52 195 aa23.06■■□□□ 1.28
HMGA2-207ENST00000537275 PWWP2BQ6NUJ5 590 aa23.06■■□□□ 1.28
HMGA2-207ENST00000537275 TTC29Q8NA56 475 aaPredicted RBP23.06■■□□□ 1.28
HMGA2-207ENST00000537275 UTP15Q8TED0 518 aaKnown RBP23.06■■□□□ 1.28
HMGA2-207ENST00000537275 GAL3ST3Q96A11 431 aa23.06■■□□□ 1.28
HMGA2-207ENST00000537275 PPP1R36Q96LQ0 422 aa23.06■■□□□ 1.28
HMGA2-207ENST00000537275 C10orf90Q96M02 699 aa23.06■■□□□ 1.28
HMGA2-207ENST00000537275 MRPS2Q9Y399 296 aaKnown RBP23.06■■□□□ 1.28
HMGA2-207ENST00000537275 SLC22A7Q9Y694 548 aa23.06■■□□□ 1.28
HMGA2-207ENST00000537275 ATP6AP2A0A1C7CYW4 349 aa23.05■■□□□ 1.28
HMGA2-207ENST00000537275 C4orf51C9J302 202 aa23.05■■□□□ 1.28
HMGA2-207ENST00000537275 SAP18O00422 153 aaKnown RBP23.05■■□□□ 1.28
HMGA2-207ENST00000537275 ZNF749O43361 778 aa23.05■■□□□ 1.28
HMGA2-207ENST00000537275 ATP6AP2O75787 350 aa23.05■■□□□ 1.28
HMGA2-207ENST00000537275 RSL1D1O76021 490 aaKnown RBP23.05■■□□□ 1.28
HMGA2-207ENST00000537275 SEMA3DO95025 777 aa23.05■■□□□ 1.28
HMGA2-207ENST00000537275 MED26O95402 600 aa23.05■■□□□ 1.28
HMGA2-207ENST00000537275 PRPH2P23942 346 aa23.05■■□□□ 1.28
HMGA2-207ENST00000537275 TBL3Q12788 808 aaKnown RBP23.05■■□□□ 1.28
HMGA2-207ENST00000537275 VWA5B1Q5TIE3 1220 aa23.05■■□□□ 1.28
HMGA2-207ENST00000537275 YOD1Q5VVQ6 348 aaPredicted RBP23.05■■□□□ 1.28
HMGA2-207ENST00000537275 CEACAM20Q6UY09 585 aa23.05■■□□□ 1.28
HMGA2-207ENST00000537275 UBE3DQ7Z6J8 389 aa23.05■■□□□ 1.28
HMGA2-207ENST00000537275 SRFBP1Q8NEF9 429 aaKnown RBP23.05■■□□□ 1.28
HMGA2-207ENST00000537275 PMEPA1Q969W9 287 aa23.05■■□□□ 1.28
HMGA2-207ENST00000537275 TAAR9Q96RI9 348 aa23.05■■□□□ 1.28
HMGA2-207ENST00000537275 CENPKQ9BS16 269 aa23.05■■□□□ 1.28
HMGA2-207ENST00000537275 TRIM55Q9BYV6 548 aa23.05■■□□□ 1.28
HMGA2-207ENST00000537275 PCDHB3Q9Y5E6 796 aa23.05■■□□□ 1.28
HMGA2-207ENST00000537275 PCDHGA8Q9Y5G5 932 aa23.05■■□□□ 1.28
HMGA2-207ENST00000537275 PLPP1O14494 284 aa23.04■■□□□ 1.28
HMGA2-207ENST00000537275 SDHDO14521 159 aa23.04■■□□□ 1.28
HMGA2-207ENST00000537275 ERI3O43414 337 aaKnown RBP23.04■■□□□ 1.28
HMGA2-207ENST00000537275 SHOX2O60902 331 aaPredicted RBP23.04■■□□□ 1.28
HMGA2-207ENST00000537275 SCRG1O75711 98 aa23.04■■□□□ 1.28
HMGA2-207ENST00000537275 ZNF888P0CJ79 500 aaPredicted RBP23.04■■□□□ 1.28
HMGA2-207ENST00000537275 ARFIP1P53367 373 aa23.04■■□□□ 1.28
HMGA2-207ENST00000537275 PLA2G16P53816 162 aa23.04■■□□□ 1.28
HMGA2-207ENST00000537275 ARSFP54793 590 aa23.04■■□□□ 1.28
HMGA2-207ENST00000537275 COL9A2Q14055 689 aaPredicted RBP23.04■■□□□ 1.28
HMGA2-207ENST00000537275 FAM53BQ14153 422 aa23.04■■□□□ 1.28
HMGA2-207ENST00000537275 NDUFA9Q16795 377 aa23.04■■□□□ 1.28
HMGA2-207ENST00000537275 MUM1Q2TAK8 710 aa23.04■■□□□ 1.28
HMGA2-207ENST00000537275 DCAF12Q5T6F0 453 aa23.04■■□□□ 1.28
HMGA2-207ENST00000537275 TRIM40Q6P9F5 258 aa23.04■■□□□ 1.28
HMGA2-207ENST00000537275 ABHD17CQ6PCB6 329 aa23.04■■□□□ 1.28
HMGA2-207ENST00000537275 EPGNQ6UW88 154 aa23.04■■□□□ 1.28
HMGA2-207ENST00000537275 ABHD13Q7L211 337 aa23.04■■□□□ 1.28
HMGA2-207ENST00000537275 TMEM126BQ8IUX1 230 aa23.04■■□□□ 1.28
HMGA2-207ENST00000537275 ZCCHC10Q8TBK6 192 aa23.04■■□□□ 1.28
HMGA2-207ENST00000537275 RGMAQ96B86 450 aa23.04■■□□□ 1.28
HMGA2-207ENST00000537275 MAELQ96JY0 434 aaKnown RBP23.04■■□□□ 1.28
HMGA2-207ENST00000537275 NDC1Q9BTX1 674 aa23.04■■□□□ 1.28
HMGA2-207ENST00000537275 DDA1Q9BW61 102 aa23.04■■□□□ 1.28
HMGA2-207ENST00000537275 MRPL1Q9BYD6 325 aaKnown RBP23.04■■□□□ 1.28
HMGA2-207ENST00000537275 SLC7A5P2Q9GIP4 190 aa23.04■■□□□ 1.28
HMGA2-207ENST00000537275 NPHS2Q9NP85 383 aa23.04■■□□□ 1.28
HMGA2-207ENST00000537275 CUTCQ9NTM9 273 aa23.04■■□□□ 1.28
HMGA2-207ENST00000537275 B3GALT1Q9Y5Z6 326 aa23.04■■□□□ 1.28
HMGA2-207ENST00000537275 SPTBN4Q9H254 2564 aa23.04■■□□□ 1.28
HMGA2-207ENST00000537275 LSM1O15116 133 aaKnown RBP23.03■■□□□ 1.28
HMGA2-207ENST00000537275 ALOX12P18054 663 aa23.03■■□□□ 1.28
HMGA2-207ENST00000537275 RAB8AP61006 207 aa23.03■■□□□ 1.28
HMGA2-207ENST00000537275 NR6A1Q15406 480 aa23.03■■□□□ 1.28
HMGA2-207ENST00000537275 SPDYAQ5MJ70 313 aa23.03■■□□□ 1.28
HMGA2-207ENST00000537275 METTL4Q8N3J2 472 aa23.03■■□□□ 1.28
HMGA2-207ENST00000537275 RFWD2Q8NHY2 731 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms