RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 SIGLEC5O15389 551 aa3.43□□□□□ -1.86
CCDC7-208ENST00000537047 SFTPDP35247 375 aa3.43□□□□□ -1.86
CCDC7-208ENST00000537047 UBXN2AP68543 259 aa3.43□□□□□ -1.86
CCDC7-208ENST00000537047 STK4Q13043 487 aa3.43□□□□□ -1.86
CCDC7-208ENST00000537047 SIM2Q14190 667 aaPredicted RBP3.43□□□□□ -1.86
CCDC7-208ENST00000537047 MZT2BQ6NZ67 158 aa3.43□□□□□ -1.86
CCDC7-208ENST00000537047 PAMR1Q6UXH9 720 aa3.43□□□□□ -1.86
CCDC7-208ENST00000537047 PIGWQ7Z7B1 504 aa3.43□□□□□ -1.86
CCDC7-208ENST00000537047 DNAAF5Q86Y56 855 aa3.43□□□□□ -1.86
CCDC7-208ENST00000537047 NAXDQ8IW45 347 aa3.43□□□□□ -1.86
CCDC7-208ENST00000537047 DND1Q8IYX4 353 aaKnown RBP3.43□□□□□ -1.86
CCDC7-208ENST00000537047 PRR22Q8IZ63 422 aa3.43□□□□□ -1.86
CCDC7-208ENST00000537047 TSPAN14Q8NG11 270 aa3.43□□□□□ -1.86
CCDC7-208ENST00000537047 WDR41Q9HAD4 459 aa3.43□□□□□ -1.86
CCDC7-208ENST00000537047 POLKQ9UBT6 870 aa3.43□□□□□ -1.86
CCDC7-208ENST00000537047 MUC19Q7Z5P9 8384 aa3.42□□□□□ -1.86
CCDC7-208ENST00000537047 GLOD5A6NK44 160 aa3.42□□□□□ -1.86
CCDC7-208ENST00000537047 A8MU76 341 aa3.42□□□□□ -1.86
CCDC7-208ENST00000537047 OR6B1O95007 311 aa3.42□□□□□ -1.86
CCDC7-208ENST00000537047 C9P02748 559 aa3.42□□□□□ -1.86
CCDC7-208ENST00000537047 PORP16435 677 aaPredicted RBP3.42□□□□□ -1.86
CCDC7-208ENST00000537047 CASP2P42575 452 aa3.42□□□□□ -1.86
CCDC7-208ENST00000537047 MAPRE1Q15691 268 aaKnown RBP3.42□□□□□ -1.86
CCDC7-208ENST00000537047 RYBPQ8N488 228 aaPredicted RBP3.42□□□□□ -1.86
CCDC7-208ENST00000537047 GCNAQ96QF7 691 aa3.42□□□□□ -1.86
CCDC7-208ENST00000537047 PHPT1Q9NRX4 125 aaPredicted RBP3.42□□□□□ -1.86
CCDC7-208ENST00000537047 CUTCQ9NTM9 273 aa3.42□□□□□ -1.86
CCDC7-208ENST00000537047 SNX8Q9Y5X2 465 aa3.42□□□□□ -1.86
CCDC7-208ENST00000537047 ZNF32P17041 273 aa3.41□□□□□ -1.86
CCDC7-208ENST00000537047 GIFP27352 417 aa3.41□□□□□ -1.86
CCDC7-208ENST00000537047 SLC1A4P43007 532 aa3.41□□□□□ -1.86
CCDC7-208ENST00000537047 ILF2Q12905 390 aaKnown RBP3.41□□□□□ -1.86
CCDC7-208ENST00000537047 LACTB2Q53H82 288 aaPredicted RBP3.41□□□□□ -1.86
CCDC7-208ENST00000537047 HERC4Q5GLZ8 1057 aaPredicted RBP3.41□□□□□ -1.86
CCDC7-208ENST00000537047 SPATA1Q5VX52 437 aa3.41□□□□□ -1.86
CCDC7-208ENST00000537047 SUSD4Q5VX71 490 aa3.41□□□□□ -1.86
CCDC7-208ENST00000537047 WSCD1Q658N2 575 aa3.41□□□□□ -1.86
CCDC7-208ENST00000537047 NHLRC1Q6VVB1 395 aa3.41□□□□□ -1.86
CCDC7-208ENST00000537047 VASH2Q86V25 355 aa3.41□□□□□ -1.86
CCDC7-208ENST00000537047 CCDC60Q8IWA6 550 aaPredicted RBP3.41□□□□□ -1.86
CCDC7-208ENST00000537047 TTC30BQ8N4P2 665 aa3.41□□□□□ -1.86
CCDC7-208ENST00000537047 SECISBP2LQ93073 1101 aaKnown RBP3.41□□□□□ -1.86
CCDC7-208ENST00000537047 RBM41Q96IZ5 413 aaKnown RBP3.41□□□□□ -1.86
CCDC7-208ENST00000537047 LINC00615Q96LM1 132 aaPredicted RBP3.41□□□□□ -1.86
CCDC7-208ENST00000537047 CCDC106Q9BWC9 280 aa3.41□□□□□ -1.86
CCDC7-208ENST00000537047 PAPOLGQ9BWT3 736 aaKnown RBP3.41□□□□□ -1.86
CCDC7-208ENST00000537047 CHMP4AQ9BY43 222 aa3.41□□□□□ -1.86
CCDC7-208ENST00000537047 KLHL4Q9C0H6 718 aa3.41□□□□□ -1.86
CCDC7-208ENST00000537047 RNF121Q9H920 327 aa3.41□□□□□ -1.86
CCDC7-208ENST00000537047 TBC1D7Q9P0N9 293 aa3.41□□□□□ -1.86
CCDC7-208ENST00000537047 ARMCX1Q9P291 453 aa3.41□□□□□ -1.86
CCDC7-208ENST00000537047 KLF18A0A0U1RQI7 1052 aa3.4□□□□□ -1.87
CCDC7-208ENST00000537047 H3BMM5 538 aa3.4□□□□□ -1.87
CCDC7-208ENST00000537047 BEST1O76090 585 aa3.4□□□□□ -1.87
CCDC7-208ENST00000537047 RECQL5O94762 991 aaPredicted RBP3.4□□□□□ -1.87
CCDC7-208ENST00000537047 ABCB1P08183 1280 aaPredicted RBP3.4□□□□□ -1.87
CCDC7-208ENST00000537047 HCKP08631 526 aa3.4□□□□□ -1.87
CCDC7-208ENST00000537047 ACTN2P35609 894 aa3.4□□□□□ -1.87
CCDC7-208ENST00000537047 LIG4P49917 911 aa3.4□□□□□ -1.87
CCDC7-208ENST00000537047 IST1P53990 364 aa3.4□□□□□ -1.87
CCDC7-208ENST00000537047 PRSS55Q6UWB4 352 aaPredicted RBP3.4□□□□□ -1.87
CCDC7-208ENST00000537047 SYT2Q8N9I0 419 aaPredicted RBP3.4□□□□□ -1.87
CCDC7-208ENST00000537047 IL12RB2Q99665 862 aa3.4□□□□□ -1.87
CCDC7-208ENST00000537047 MXD3Q9BW11 206 aa3.4□□□□□ -1.87
CCDC7-208ENST00000537047 UBA5Q9GZZ9 404 aa3.4□□□□□ -1.87
CCDC7-208ENST00000537047 RPS6KA6Q9UK32 745 aa3.4□□□□□ -1.87
CCDC7-208ENST00000537047 GFPT2O94808 682 aa3.39□□□□□ -1.87
CCDC7-208ENST00000537047 SUPT20HL2P0C7V6 817 aa3.39□□□□□ -1.87
CCDC7-208ENST00000537047 NNMTP40261 264 aa3.39□□□□□ -1.87
CCDC7-208ENST00000537047 LETM2Q2VYF4 491 aa3.39□□□□□ -1.87
CCDC7-208ENST00000537047 TTC31Q49AM3 519 aaPredicted RBP3.39□□□□□ -1.87
CCDC7-208ENST00000537047 ANKRD33Q7Z3H0 272 aa3.39□□□□□ -1.87
CCDC7-208ENST00000537047 IQCHQ86VS3 1027 aa3.39□□□□□ -1.87
CCDC7-208ENST00000537047 LRRC49Q8IUZ0 686 aa3.39□□□□□ -1.87
CCDC7-208ENST00000537047 TC2NQ8N9U0 490 aa3.39□□□□□ -1.87
CCDC7-208ENST00000537047 GTSF1Q8WW33 167 aa3.39□□□□□ -1.87
CCDC7-208ENST00000537047 APOL6Q9BWW8 343 aa3.39□□□□□ -1.87
CCDC7-208ENST00000537047 PNNQ9H307 717 aaKnown RBP3.39□□□□□ -1.87
CCDC7-208ENST00000537047 C3orf14Q9HBI5 128 aa3.39□□□□□ -1.87
CCDC7-208ENST00000537047 DEPPQ9NTK1 212 aa3.39□□□□□ -1.87
CCDC7-208ENST00000537047 COLEC10Q9Y6Z7 277 aa3.39□□□□□ -1.87
CCDC7-208ENST00000537047 IL16Q14005 1332 aa3.39□□□□□ -1.87
CCDC7-208ENST00000537047 RNF123Q5XPI4 1314 aa3.39□□□□□ -1.87
CCDC7-208ENST00000537047 TRAV9-2A0A087WT02 112 aa3.38□□□□□ -1.87
CCDC7-208ENST00000537047 E7ENQ6 273 aa3.38□□□□□ -1.87
CCDC7-208ENST00000537047 CLDN4O14493 209 aa3.38□□□□□ -1.87
CCDC7-208ENST00000537047 INPP4BO15327 924 aa3.38□□□□□ -1.87
CCDC7-208ENST00000537047 SRPX2O60687 465 aaPredicted RBP3.38□□□□□ -1.87
CCDC7-208ENST00000537047 STARD3NLO95772 234 aa3.38□□□□□ -1.87
CCDC7-208ENST00000537047 FASP25445 335 aa3.38□□□□□ -1.87
CCDC7-208ENST00000537047 HNRNPA3P51991 378 aaKnown RBP3.38□□□□□ -1.87
CCDC7-208ENST00000537047 RALGDSQ12967 914 aa3.38□□□□□ -1.87
CCDC7-208ENST00000537047 PTPRCAPQ14761 206 aa3.38□□□□□ -1.87
CCDC7-208ENST00000537047 PTGISQ16647 500 aa3.38□□□□□ -1.87
CCDC7-208ENST00000537047 POM121L1PQ3SYA9 428 aa3.38□□□□□ -1.87
CCDC7-208ENST00000537047 ZNF530Q6P9A1 599 aaPredicted RBP3.38□□□□□ -1.87
CCDC7-208ENST00000537047 DET1Q7L5Y6 550 aa3.38□□□□□ -1.87
CCDC7-208ENST00000537047 CENPVQ7Z7K6 275 aaPredicted RBP3.38□□□□□ -1.87
CCDC7-208ENST00000537047 PYCR2Q96C36 320 aa3.38□□□□□ -1.87
CCDC7-208ENST00000537047 RUNDC3BQ96NL0 473 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms