RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 TP73O15350 636 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 NRP2O60462 931 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 CNOT3O75175 753 aaKnown RBP6.71□□□□□ -1.34
YBX3-206ENST00000536823 KLF7O75840 302 aaPredicted RBP6.71□□□□□ -1.34
YBX3-206ENST00000536823 DNAJB5O75953 348 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 HAUS5O94927 633 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 CCNDBP1O95273 360 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 SLC16A8O95907 504 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 ONECUT2O95948 504 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 CD63P08962 238 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 NR1D1P20393 614 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 ITGAXP20702 1163 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 MCM3P25205 808 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 GABRB3P28472 473 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 RPA3P35244 121 aaPredicted RBP6.71□□□□□ -1.34
YBX3-206ENST00000536823 CASRP41180 1078 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 ELK3P41970 407 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 RGS4P49798 205 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 ITGA8P53708 1063 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 PNLIPRP1P54315 467 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 ARSFP54793 590 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 CDKN2DP55273 166 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 ARL4CP56559 192 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 VSX2P58304 361 aaPredicted RBP6.71□□□□□ -1.34
YBX3-206ENST00000536823 TIAL1Q01085 375 aaKnown RBP eCLIP6.71□□□□□ -1.34
YBX3-206ENST00000536823 TAP2Q03519 686 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 ATP1A4Q13733 1029 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 FRG1Q14331 258 aaKnown RBP6.71□□□□□ -1.34
YBX3-206ENST00000536823 GRM7Q14831 915 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 SLC9A5Q14940 896 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 RBM20Q5T481 1227 aaKnown RBP6.71□□□□□ -1.34
YBX3-206ENST00000536823 MLIPQ5VWP3 458 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 UGT3A1Q6NUS8 523 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 POMZP3Q6PJE2 187 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 SUSD1Q6UWL2 747 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 CYHR1Q6ZMK1 362 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 PIWIL4Q7Z3Z4 852 aaKnown RBP6.71□□□□□ -1.34
YBX3-206ENST00000536823 PAQR7Q86WK9 346 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 ZNF227Q86WZ6 799 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 TTC29Q8NA56 475 aaPredicted RBP6.71□□□□□ -1.34
YBX3-206ENST00000536823 OR2Y1Q8NGV0 311 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 ZNF480Q8WV37 535 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 CERS2Q96G23 380 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 CFAP36Q96G28 342 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 PWWP2AQ96N64 755 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 IP6K3Q96PC2 410 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 NDNQ99608 321 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 ZFYVE21Q9BQ24 234 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 PLCD4Q9BRC7 762 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 DPH7Q9BTV6 452 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 ACAT2Q9BWD1 397 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 TRIM4Q9C037 500 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 ING2Q9H160 280 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 MRPS30Q9NP92 439 aaKnown RBP6.71□□□□□ -1.34
YBX3-206ENST00000536823 SLC22A11Q9NSA0 550 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 CUTCQ9NTM9 273 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 TAS2R13Q9NYV9 303 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 IFT80Q9P2H3 777 aaPredicted RBP6.71□□□□□ -1.34
YBX3-206ENST00000536823 SLC17A6Q9P2U8 582 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 CGGBP1Q9UFW8 167 aaPredicted RBP6.71□□□□□ -1.34
YBX3-206ENST00000536823 NDOR1Q9UHB4 597 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 PFDN2Q9UHV9 154 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 CORO1CQ9ULV4 474 aaPredicted RBP6.71□□□□□ -1.34
YBX3-206ENST00000536823 PTRH2Q9Y3E5 179 aaKnown RBP6.71□□□□□ -1.34
YBX3-206ENST00000536823 PCDHGA9Q9Y5G4 932 aaKnown RBP6.71□□□□□ -1.34
YBX3-206ENST00000536823 TEX264Q9Y6I9 313 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 TNRC6AQ8NDV7 1962 aaKnown RBP6.71□□□□□ -1.34
YBX3-206ENST00000536823 RELNP78509 3460 aa6.71□□□□□ -1.34
YBX3-206ENST00000536823 SVILO95425 2214 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 POLEQ07864 2286 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 ESPL1Q14674 2120 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 IGKV1-8A0A0C4DH67 115 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 SHISA3A0PJX4 238 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 EFCAB8A8MWE9 144 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 E7ESA3 106 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 PYCARD-AS1I3L0S3 204 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 K7EM74 188 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 NDC80O14777 642 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 ZBTB14O43829 449 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 SRPX2O60687 465 aaPredicted RBP6.7□□□□□ -1.34
YBX3-206ENST00000536823 CEACAM4O75871 244 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 SYF2O95926 243 aaKnown RBP6.7□□□□□ -1.34
YBX3-206ENST00000536823 AHSGP02765 367 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 C8GP07360 202 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 UMODP07911 640 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 PIM1P11309 404 aaPredicted RBP6.7□□□□□ -1.34
YBX3-206ENST00000536823 EZRP15311 586 aaKnown RBP6.7□□□□□ -1.34
YBX3-206ENST00000536823 HSD3B2P26439 372 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 IMPA1P29218 277 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 OTX2P32243 289 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 FOLR3P41439 243 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 RPL21P46778 160 aaKnown RBP6.7□□□□□ -1.34
YBX3-206ENST00000536823 CARSP49589 748 aaKnown RBP6.7□□□□□ -1.34
YBX3-206ENST00000536823 PGDP52209 483 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 RRADP55042 308 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 YBX1P67809 324 aaKnown RBP6.7□□□□□ -1.34
YBX3-206ENST00000536823 ABATP80404 500 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 TLE1Q04724 770 aa6.7□□□□□ -1.34
YBX3-206ENST00000536823 PRDX1Q06830 199 aaKnown RBP6.7□□□□□ -1.34
YBX3-206ENST00000536823 KLRB1Q12918 225 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms