RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 PPANQ9NQ55 473 aaKnown RBP18.5■□□□□ 0.55
TNFRSF1B-204ENST00000536782 F8P00451 2351 aa18.5■□□□□ 0.55
TNFRSF1B-204ENST00000536782 GABRR3A8MPY1 467 aa18.49■□□□□ 0.55
TNFRSF1B-204ENST00000536782 FAM227AF5H4B4 570 aa18.49■□□□□ 0.55
TNFRSF1B-204ENST00000536782 CHST10O43529 356 aa18.49■□□□□ 0.55
TNFRSF1B-204ENST00000536782 MAN1A2O60476 641 aa18.49■□□□□ 0.55
TNFRSF1B-204ENST00000536782 WISP2O76076 250 aa18.49■□□□□ 0.55
TNFRSF1B-204ENST00000536782 ENO2P09104 434 aaPredicted RBP18.49■□□□□ 0.55
TNFRSF1B-204ENST00000536782 GRNP28799 593 aaKnown RBP18.49■□□□□ 0.55
TNFRSF1B-204ENST00000536782 ST13P50502 369 aaKnown RBP18.49■□□□□ 0.55
TNFRSF1B-204ENST00000536782 SLC26A5P58743 744 aa18.49■□□□□ 0.55
TNFRSF1B-204ENST00000536782 ALDH6A1Q02252 535 aaKnown RBP18.49■□□□□ 0.55
TNFRSF1B-204ENST00000536782 OC90Q02509 493 aaPredicted RBP18.49■□□□□ 0.55
TNFRSF1B-204ENST00000536782 CSHL1Q14406 222 aa18.49■□□□□ 0.55
TNFRSF1B-204ENST00000536782 BBS9Q3SYG4 887 aa18.49■□□□□ 0.55
TNFRSF1B-204ENST00000536782 CATSPEREQ5SY80 951 aa18.49■□□□□ 0.55
TNFRSF1B-204ENST00000536782 HECTD2Q5U5R9 776 aa18.49■□□□□ 0.55
TNFRSF1B-204ENST00000536782 ABHD13Q7L211 337 aa18.49■□□□□ 0.55
TNFRSF1B-204ENST00000536782 STRA8Q7Z7C7 330 aa18.49■□□□□ 0.55
TNFRSF1B-204ENST00000536782 LGI4Q8N135 537 aa18.49■□□□□ 0.55
TNFRSF1B-204ENST00000536782 FBXL8Q96CD0 374 aa18.49■□□□□ 0.55
TNFRSF1B-204ENST00000536782 GPR137Q96N19 417 aa18.49■□□□□ 0.55
TNFRSF1B-204ENST00000536782 CHST11Q9NPF2 352 aa18.49■□□□□ 0.55
TNFRSF1B-204ENST00000536782 ZFP69BQ9UJL9 534 aa18.49■□□□□ 0.55
TNFRSF1B-204ENST00000536782 CORO1CQ9ULV4 474 aaPredicted RBP18.49■□□□□ 0.55
TNFRSF1B-204ENST00000536782 ADGRG4Q8IZF6 3080 aa18.49■□□□□ 0.55
TNFRSF1B-204ENST00000536782 ASPDHA6ND91 283 aa18.48■□□□□ 0.55
TNFRSF1B-204ENST00000536782 NDC80O14777 642 aa18.48■□□□□ 0.55
TNFRSF1B-204ENST00000536782 GUCA1CO95843 209 aa18.48■□□□□ 0.55
TNFRSF1B-204ENST00000536782 ZNF888P0CJ79 500 aaPredicted RBP18.48■□□□□ 0.55
TNFRSF1B-204ENST00000536782 ESRRAP11474 423 aaPredicted RBP18.48■□□□□ 0.55
TNFRSF1B-204ENST00000536782 HTR1EP28566 365 aa18.48■□□□□ 0.55
TNFRSF1B-204ENST00000536782 OLR1P78380 273 aa18.48■□□□□ 0.55
TNFRSF1B-204ENST00000536782 C3AR1Q16581 482 aa18.48■□□□□ 0.55
TNFRSF1B-204ENST00000536782 TEDDM1Q5T9Z0 273 aa18.48■□□□□ 0.55
TNFRSF1B-204ENST00000536782 FAM45BPQ6NSW5 357 aa18.48■□□□□ 0.55
TNFRSF1B-204ENST00000536782 IGDCC3Q8IVU1 814 aa18.48■□□□□ 0.55
TNFRSF1B-204ENST00000536782 SLC35F6Q8N357 371 aa18.48■□□□□ 0.55
TNFRSF1B-204ENST00000536782 FAM98AQ8NCA5 519 aaKnown RBP18.48■□□□□ 0.55
TNFRSF1B-204ENST00000536782 NT5CQ8TCD5 201 aa18.48■□□□□ 0.55
TNFRSF1B-204ENST00000536782 FAM45AQ8TCE6 357 aa18.48■□□□□ 0.55
TNFRSF1B-204ENST00000536782 SLC5A11Q8WWX8 675 aa18.48■□□□□ 0.55
TNFRSF1B-204ENST00000536782 NEIL2Q969S2 332 aa18.48■□□□□ 0.55
TNFRSF1B-204ENST00000536782 MAGED4Q96JG8 741 aa18.48■□□□□ 0.55
TNFRSF1B-204ENST00000536782 DDX47Q9H0S4 455 aaKnown RBP18.48■□□□□ 0.55
TNFRSF1B-204ENST00000536782 CDCP1Q9H5V8 836 aa18.48■□□□□ 0.55
TNFRSF1B-204ENST00000536782 SLC17A6Q9P2U8 582 aa18.48■□□□□ 0.55
TNFRSF1B-204ENST00000536782 VWA7Q9Y334 891 aa18.48■□□□□ 0.55
TNFRSF1B-204ENST00000536782 CCDC168Q8NDH2 2452 aa18.48■□□□□ 0.55
TNFRSF1B-204ENST00000536782 CES2O00748 559 aa18.47■□□□□ 0.55
TNFRSF1B-204ENST00000536782 CDK2AP1O14519 115 aa18.47■□□□□ 0.55
TNFRSF1B-204ENST00000536782 B4GALT2O60909 372 aa18.47■□□□□ 0.55
TNFRSF1B-204ENST00000536782 DNAJB6O75190 326 aa18.47■□□□□ 0.55
TNFRSF1B-204ENST00000536782 B3GALT4O96024 378 aa18.47■□□□□ 0.55
TNFRSF1B-204ENST00000536782 AHRP35869 848 aa18.47■□□□□ 0.55
TNFRSF1B-204ENST00000536782 SCTRP47872 440 aa18.47■□□□□ 0.55
TNFRSF1B-204ENST00000536782 PGGT1BP53609 377 aa18.47■□□□□ 0.55
TNFRSF1B-204ENST00000536782 ZNF630Q2M218 657 aaPredicted RBP18.47■□□□□ 0.55
TNFRSF1B-204ENST00000536782 SLC25A25Q6KCM7 469 aa18.47■□□□□ 0.55
TNFRSF1B-204ENST00000536782 XKRXQ6PP77 449 aa18.47■□□□□ 0.55
TNFRSF1B-204ENST00000536782 GALNTL5Q7Z4T8 443 aa18.47■□□□□ 0.55
TNFRSF1B-204ENST00000536782 RPS19BP1Q86WX3 136 aaKnown RBP18.47■□□□□ 0.55
TNFRSF1B-204ENST00000536782 ELP5Q8TE02 316 aa18.47■□□□□ 0.55
TNFRSF1B-204ENST00000536782 SLCO2A1Q92959 643 aa18.47■□□□□ 0.55
TNFRSF1B-204ENST00000536782 PTCHD1Q96NR3 888 aa18.47■□□□□ 0.55
TNFRSF1B-204ENST00000536782 SPNS1Q9H2V7 528 aa18.47■□□□□ 0.55
TNFRSF1B-204ENST00000536782 LRFN1Q9P244 771 aa18.47■□□□□ 0.55
TNFRSF1B-204ENST00000536782 TINAGQ9UJW2 476 aa18.47■□□□□ 0.55
TNFRSF1B-204ENST00000536782 URADA6NGE7 173 aa18.46■□□□□ 0.55
TNFRSF1B-204ENST00000536782 NPIPA5E9PKD4 350 aa18.46■□□□□ 0.55
TNFRSF1B-204ENST00000536782 ZSCAN12O43309 604 aa18.46■□□□□ 0.55
TNFRSF1B-204ENST00000536782 PRMT3O60678 531 aa18.46■□□□□ 0.55
TNFRSF1B-204ENST00000536782 NEURL1O76050 574 aa18.46■□□□□ 0.55
TNFRSF1B-204ENST00000536782 SP1P08047 785 aa18.46■□□□□ 0.55
TNFRSF1B-204ENST00000536782 QSOX2Q6ZRP7 698 aa18.46■□□□□ 0.55
TNFRSF1B-204ENST00000536782 SPPL2CQ8IUH8 684 aa18.46■□□□□ 0.55
TNFRSF1B-204ENST00000536782 CYP4X1Q8N118 509 aa18.46■□□□□ 0.55
TNFRSF1B-204ENST00000536782 PDIK1LQ8N165 341 aa18.46■□□□□ 0.55
TNFRSF1B-204ENST00000536782 UTP15Q8TED0 518 aaKnown RBP18.46■□□□□ 0.55
TNFRSF1B-204ENST00000536782 CFAP36Q96G28 342 aa18.46■□□□□ 0.55
TNFRSF1B-204ENST00000536782 PDLIM5Q96HC4 596 aaKnown RBP18.46■□□□□ 0.55
TNFRSF1B-204ENST00000536782 PDLIM2Q96JY6 352 aa18.46■□□□□ 0.55
TNFRSF1B-204ENST00000536782 TSNARE1Q96NA8 513 aa18.46■□□□□ 0.55
TNFRSF1B-204ENST00000536782 FRMD6Q96NE9 622 aa18.46■□□□□ 0.55
TNFRSF1B-204ENST00000536782 OLFM1Q99784 485 aa18.46■□□□□ 0.55
TNFRSF1B-204ENST00000536782 TSPAN10Q9H1Z9 355 aaPredicted RBP18.46■□□□□ 0.55
TNFRSF1B-204ENST00000536782 PELI2Q9HAT8 420 aa18.46■□□□□ 0.55
TNFRSF1B-204ENST00000536782 CLK4Q9HAZ1 481 aaKnown RBP18.46■□□□□ 0.55
TNFRSF1B-204ENST00000536782 PLAC1Q9HBJ0 212 aa18.46■□□□□ 0.55
TNFRSF1B-204ENST00000536782 SNX12Q9UMY4 172 aa18.46■□□□□ 0.55
TNFRSF1B-204ENST00000536782 NPIPA1Q9UND3 350 aa18.46■□□□□ 0.55
TNFRSF1B-204ENST00000536782 ZNF835Q9Y2P0 537 aa18.46■□□□□ 0.55
TNFRSF1B-204ENST00000536782 DYRK1BQ9Y463 629 aa18.46■□□□□ 0.55
TNFRSF1B-204ENST00000536782 AKAP9Q99996 3911 aa18.45■□□□□ 0.54
TNFRSF1B-204ENST00000536782 AGAP20933 346 aa18.45■□□□□ 0.54
TNFRSF1B-204ENST00000536782 ELAVL4P26378 380 aaKnown RBP18.45■□□□□ 0.54
TNFRSF1B-204ENST00000536782 PTGER4P35408 488 aa18.45■□□□□ 0.54
TNFRSF1B-204ENST00000536782 ELK3P41970 407 aa18.45■□□□□ 0.54
TNFRSF1B-204ENST00000536782 SMSP52788 366 aa18.45■□□□□ 0.54
TNFRSF1B-204ENST00000536782 BTG2P78543 158 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms