RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 RBBP7Q16576 425 aa12.86□□□□□ -0.35
RPAIN-205ENST00000536255 ZNF678Q5SXM1 525 aa12.86□□□□□ -0.35
RPAIN-205ENST00000536255 FAM69BQ5VUD6 431 aa12.86□□□□□ -0.35
RPAIN-205ENST00000536255 MLIPQ5VWP3 458 aa12.86□□□□□ -0.35
RPAIN-205ENST00000536255 TMEM214Q6NUQ4 689 aaKnown RBP12.86□□□□□ -0.35
RPAIN-205ENST00000536255 ABHD13Q7L211 337 aa12.86□□□□□ -0.35
RPAIN-205ENST00000536255 HDXQ7Z353 690 aa12.86□□□□□ -0.35
RPAIN-205ENST00000536255 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.86□□□□□ -0.35
RPAIN-205ENST00000536255 ZNF843Q8N446 348 aa12.86□□□□□ -0.35
RPAIN-205ENST00000536255 ANKRD53Q8N9V6 530 aa12.86□□□□□ -0.35
RPAIN-205ENST00000536255 NT5CQ8TCD5 201 aa12.86□□□□□ -0.35
RPAIN-205ENST00000536255 ADAMTS17Q8TE56 1095 aa12.86□□□□□ -0.35
RPAIN-205ENST00000536255 ZNF483Q8TF39 744 aaPredicted RBP12.86□□□□□ -0.35
RPAIN-205ENST00000536255 SREK1Q8WXA9 508 aaKnown RBP12.86□□□□□ -0.35
RPAIN-205ENST00000536255 THAP4Q8WY91 577 aa12.86□□□□□ -0.35
RPAIN-205ENST00000536255 CCT6BQ92526 530 aa12.86□□□□□ -0.35
RPAIN-205ENST00000536255 L3HYPDHQ96EM0 354 aa12.86□□□□□ -0.35
RPAIN-205ENST00000536255 TMEM237Q96Q45 408 aa12.86□□□□□ -0.35
RPAIN-205ENST00000536255 NTMT1Q9BV86 223 aa12.86□□□□□ -0.35
RPAIN-205ENST00000536255 SYNPO2LQ9H987 977 aa12.86□□□□□ -0.35
RPAIN-205ENST00000536255 ANKHQ9HCJ1 492 aa12.86□□□□□ -0.35
RPAIN-205ENST00000536255 SSU72Q9NP77 194 aaKnown RBP12.86□□□□□ -0.35
RPAIN-205ENST00000536255 SEMA4BQ9NPR2 832 aaPredicted RBP12.86□□□□□ -0.35
RPAIN-205ENST00000536255 MAN2B2Q9Y2E5 1009 aa12.86□□□□□ -0.35
RPAIN-205ENST00000536255 PCDHGA11Q9Y5H2 935 aa12.86□□□□□ -0.35
RPAIN-205ENST00000536255 SLC22A7Q9Y694 548 aa12.86□□□□□ -0.35
RPAIN-205ENST00000536255 MDC1Q14676 2089 aaKnown RBP12.85□□□□□ -0.35
RPAIN-205ENST00000536255 G3V2L1 256 aa12.85□□□□□ -0.35
RPAIN-205ENST00000536255 PRAMEF4O60810 478 aa12.85□□□□□ -0.35
RPAIN-205ENST00000536255 SPAG7O75391 227 aa12.85□□□□□ -0.35
RPAIN-205ENST00000536255 KLF7O75840 302 aaPredicted RBP12.85□□□□□ -0.35
RPAIN-205ENST00000536255 ONECUT2O95948 504 aa12.85□□□□□ -0.35
RPAIN-205ENST00000536255 ALBP02768 609 aa12.85□□□□□ -0.35
RPAIN-205ENST00000536255 STATHP02808 62 aa12.85□□□□□ -0.35
RPAIN-205ENST00000536255 ATXN8OSP0DMR3 200 aa12.85□□□□□ -0.35
RPAIN-205ENST00000536255 CD22P20273 847 aa12.85□□□□□ -0.35
RPAIN-205ENST00000536255 DNAJB13P59910 316 aa12.85□□□□□ -0.35
RPAIN-205ENST00000536255 CLCQ05315 142 aa12.85□□□□□ -0.35
RPAIN-205ENST00000536255 TGM3Q08188 693 aa12.85□□□□□ -0.35
RPAIN-205ENST00000536255 TNFAIP8L3Q5GJ75 292 aa12.85□□□□□ -0.35
RPAIN-205ENST00000536255 CFAP157Q5JU67 520 aa12.85□□□□□ -0.35
RPAIN-205ENST00000536255 C10orf62Q5T681 223 aaPredicted RBP12.85□□□□□ -0.35
RPAIN-205ENST00000536255 PRAMEF9Q5VWM5 478 aa12.85□□□□□ -0.35
RPAIN-205ENST00000536255 MRPL14Q6P1L8 145 aaKnown RBP12.85□□□□□ -0.35
RPAIN-205ENST00000536255 MILR1Q7Z6M3 343 aa12.85□□□□□ -0.35
RPAIN-205ENST00000536255 LAS2Q8IYD9 372 aa12.85□□□□□ -0.35
RPAIN-205ENST00000536255 L3MBTL4Q8NA19 623 aa12.85□□□□□ -0.35
RPAIN-205ENST00000536255 KCT2Q8NC54 265 aa12.85□□□□□ -0.35
RPAIN-205ENST00000536255 ARMC2Q8NEN0 867 aa12.85□□□□□ -0.35
RPAIN-205ENST00000536255 TCP10LQ8TDR4 215 aa12.85□□□□□ -0.35
RPAIN-205ENST00000536255 COL26A1Q96A83 441 aa12.85□□□□□ -0.35
RPAIN-205ENST00000536255 FKBP10Q96AY3 582 aa12.85□□□□□ -0.35
RPAIN-205ENST00000536255 FAM111AQ96PZ2 611 aa12.85□□□□□ -0.35
RPAIN-205ENST00000536255 RHBGQ9H310 441 aa12.85□□□□□ -0.35
RPAIN-205ENST00000536255 ZNF304Q9HCX3 659 aa12.85□□□□□ -0.35
RPAIN-205ENST00000536255 SLC22A11Q9NSA0 550 aa12.85□□□□□ -0.35
RPAIN-205ENST00000536255 OXSMQ9NWU1 459 aa12.85□□□□□ -0.35
RPAIN-205ENST00000536255 TUBD1Q9UJT1 453 aa12.85□□□□□ -0.35
RPAIN-205ENST00000536255 TSC22D4Q9Y3Q8 395 aa12.85□□□□□ -0.35
RPAIN-205ENST00000536255 A0A088AWK7 358 aa12.84□□□□□ -0.35
RPAIN-205ENST00000536255 H0YIG0 161 aa12.84□□□□□ -0.35
RPAIN-205ENST00000536255 H0YIV9 168 aa12.84□□□□□ -0.35
RPAIN-205ENST00000536255 H3BQF6 201 aa12.84□□□□□ -0.35
RPAIN-205ENST00000536255 OR7A17O14581 309 aa12.84□□□□□ -0.35
RPAIN-205ENST00000536255 TM9SF1O15321 606 aa12.84□□□□□ -0.35
RPAIN-205ENST00000536255 TYROBPO43914 113 aa12.84□□□□□ -0.35
RPAIN-205ENST00000536255 CNOT3O75175 753 aaKnown RBP12.84□□□□□ -0.35
RPAIN-205ENST00000536255 MED26O95402 600 aa12.84□□□□□ -0.35
RPAIN-205ENST00000536255 NSA2O95478 260 aaKnown RBP12.84□□□□□ -0.35
RPAIN-205ENST00000536255 PCNAP12004 261 aa12.84□□□□□ -0.35
RPAIN-205ENST00000536255 ALOX12P18054 663 aa12.84□□□□□ -0.35
RPAIN-205ENST00000536255 ZNF10P21506 573 aaPredicted RBP12.84□□□□□ -0.35
RPAIN-205ENST00000536255 FBLP22087 321 aaKnown RBP12.84□□□□□ -0.35
RPAIN-205ENST00000536255 FOLR3P41439 243 aa12.84□□□□□ -0.35
RPAIN-205ENST00000536255 PIK3CBP42338 1070 aa12.84□□□□□ -0.35
RPAIN-205ENST00000536255 CDH13P55290 713 aa12.84□□□□□ -0.35
RPAIN-205ENST00000536255 OCA2Q04671 838 aa12.84□□□□□ -0.35
RPAIN-205ENST00000536255 C19orf57Q0VDD7 668 aa12.84□□□□□ -0.35
RPAIN-205ENST00000536255 DSG2Q14126 1118 aa12.84□□□□□ -0.35
RPAIN-205ENST00000536255 GGTA1PQ4G0N0 100 aa12.84□□□□□ -0.35
RPAIN-205ENST00000536255 UNC50Q53HI1 259 aa12.84□□□□□ -0.35
RPAIN-205ENST00000536255 LIPMQ5VYY2 423 aa12.84□□□□□ -0.35
RPAIN-205ENST00000536255 EXOC3L1Q86VI1 746 aa12.84□□□□□ -0.35
RPAIN-205ENST00000536255 APLFQ8IW19 511 aaPredicted RBP12.84□□□□□ -0.35
RPAIN-205ENST00000536255 ARHGEF39Q8N4T4 335 aa12.84□□□□□ -0.35
RPAIN-205ENST00000536255 METTL27Q8N6F8 245 aaPredicted RBP12.84□□□□□ -0.35
RPAIN-205ENST00000536255 CCNYL1Q8N7R7 359 aa12.84□□□□□ -0.35
RPAIN-205ENST00000536255 SRFBP1Q8NEF9 429 aaKnown RBP12.84□□□□□ -0.35
RPAIN-205ENST00000536255 OR7G3Q8NG95 312 aa12.84□□□□□ -0.35
RPAIN-205ENST00000536255 OR52B6Q8NGF0 335 aa12.84□□□□□ -0.35
RPAIN-205ENST00000536255 OR2Y1Q8NGV0 311 aa12.84□□□□□ -0.35
RPAIN-205ENST00000536255 ZCCHC10Q8TBK6 192 aa12.84□□□□□ -0.35
RPAIN-205ENST00000536255 TRPC4APQ8TEL6 797 aa12.84□□□□□ -0.35
RPAIN-205ENST00000536255 CREB3L4Q8TEY5 395 aa12.84□□□□□ -0.35
RPAIN-205ENST00000536255 MMABQ96EY8 250 aaPredicted RBP12.84□□□□□ -0.35
RPAIN-205ENST00000536255 NSUN5Q96P11 429 aaKnown RBP12.84□□□□□ -0.35
RPAIN-205ENST00000536255 ZNF382Q96SR6 550 aa12.84□□□□□ -0.35
RPAIN-205ENST00000536255 MACROD1Q9BQ69 325 aa12.84□□□□□ -0.35
RPAIN-205ENST00000536255 CENPKQ9BS16 269 aa12.84□□□□□ -0.35
RPAIN-205ENST00000536255 SLC6A16Q9GZN6 736 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms