RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 CSADQ9Y600 493 aa6.67□□□□□ -1.34
CPSF7-215ENST00000536145 RNF215Q9Y6U7 377 aa6.67□□□□□ -1.34
CPSF7-215ENST00000536145 CHD5Q8TDI0 1954 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 M0R129 80 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 FZD9O00144 591 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 GAPDHSO14556 408 aaPredicted RBP6.66□□□□□ -1.34
CPSF7-215ENST00000536145 CXCL11O14625 94 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 FPGTO14772 594 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 SCAMP3O14828 347 aaKnown RBP6.66□□□□□ -1.34
CPSF7-215ENST00000536145 TFECO14948 347 aaPredicted RBP6.66□□□□□ -1.34
CPSF7-215ENST00000536145 MYL12BO14950 172 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 ADAMDEC1O15204 470 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 MPZL2O60487 215 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 PRAMEF4O60810 478 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 RAMP2O60895 175 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 SLC22A5O76082 557 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 PDE9AO76083 593 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 CCNB2O95067 398 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 EPN2O95208 641 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 RECKO95980 971 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 F2P00734 622 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 PDGFAP04085 211 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 FHP07954 510 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 HBQ1P09105 142 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 NUDT7P0C024 238 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 MYL12AP19105 171 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 MAPK1P28482 360 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 TALDO1P37837 337 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 ETV3P41162 512 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 GDF5P43026 501 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 TGM4P49221 684 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 MVDP53602 400 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 ATN1P54259 1190 aaPredicted RBP6.66□□□□□ -1.34
CPSF7-215ENST00000536145 RRAS2P62070 204 aaPredicted RBP6.66□□□□□ -1.34
CPSF7-215ENST00000536145 BTG1P62324 171 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 ABATP80404 500 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 SRSF11Q05519 484 aaKnown RBP6.66□□□□□ -1.34
CPSF7-215ENST00000536145 EEF1A2Q05639 463 aaKnown RBP6.66□□□□□ -1.34
CPSF7-215ENST00000536145 CACNB2Q08289 660 aaPredicted RBP6.66□□□□□ -1.34
CPSF7-215ENST00000536145 MLLT11Q13015 90 aaPredicted RBP6.66□□□□□ -1.34
CPSF7-215ENST00000536145 BAMBIQ13145 260 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 KCNC3Q14003 757 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 ZNF235Q14590 738 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 VEPH1Q14D04 833 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 UPP1Q16831 310 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 TATDN3Q17R31 274 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 EXOC3L2Q2M3D2 409 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 ZXDCQ2QGD7 858 aaPredicted RBP6.66□□□□□ -1.34
CPSF7-215ENST00000536145 DUSP28Q4G0W2 176 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 SGO1Q5FBB7 561 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 PRAMEF9Q5VWM5 478 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 SPRYD7Q5W111 196 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 OVOS1Q6IE37 1185 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 FRMPD2BQ6IN97 320 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 ZNF770Q6IQ21 691 aaPredicted RBP6.66□□□□□ -1.34
CPSF7-215ENST00000536145 METAP1DQ6UB28 335 aaPredicted RBP6.66□□□□□ -1.34
CPSF7-215ENST00000536145 PAMR1Q6UXH9 720 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 GLT6D1Q7Z4J2 308 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 KCTD20Q7Z5Y7 419 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 CAMKMTQ7Z624 323 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 MRPL10Q7Z7H8 261 aaKnown RBP6.66□□□□□ -1.34
CPSF7-215ENST00000536145 GLCCI1Q86VQ1 547 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 AMIGO1Q86WK6 493 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 TRIM69Q86WT6 500 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 RASGRP3Q8IV61 690 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 TRIM48Q8IWZ4 208 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 PHC2Q8IXK0 858 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 LGI4Q8N135 537 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 STK40Q8N2I9 435 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 L3MBTL4Q8NA19 623 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 OR8J2Q8NGG1 315 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 WDR36Q8NI36 951 aaKnown RBP6.66□□□□□ -1.34
CPSF7-215ENST00000536145 VANGL1Q8TAA9 524 aaPredicted RBP6.66□□□□□ -1.34
CPSF7-215ENST00000536145 TRPM4Q8TD43 1214 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 DNAJA4Q8WW22 397 aaPredicted RBP6.66□□□□□ -1.34
CPSF7-215ENST00000536145 DNAJB3Q8WWF6 145 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 ZBED6CLQ96FA7 236 aaPredicted RBP6.66□□□□□ -1.34
CPSF7-215ENST00000536145 WBP1Q96G27 269 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 APIPQ96GX9 242 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 TSSK3Q96PN8 268 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 SORCS2Q96PQ0 1159 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 PSKH2Q96QS6 385 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 KCNJ15Q99712 375 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 COQ7Q99807 217 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 C17orf62Q9BQA9 187 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 DPH2Q9BQC3 489 aaPredicted RBP6.66□□□□□ -1.34
CPSF7-215ENST00000536145 AIFM2Q9BRQ8 373 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 FAM126AQ9BYI3 521 aaPredicted RBP6.66□□□□□ -1.34
CPSF7-215ENST00000536145 PRRG3Q9BZD7 231 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 UCK2Q9BZX2 261 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 SNTG1Q9NSN8 517 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 RBFOX1Q9NWB1 397 aaKnown RBP6.66□□□□□ -1.34
CPSF7-215ENST00000536145 FAM120CQ9NX05 1096 aaKnown RBP6.66□□□□□ -1.34
CPSF7-215ENST00000536145 ABI2Q9NYB9 513 aaPredicted RBP6.66□□□□□ -1.34
CPSF7-215ENST00000536145 MAT2BQ9NZL9 334 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 IL17CQ9P0M4 197 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 REV1Q9UBZ9 1251 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 BTNL2Q9UIR0 455 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 PCDHGB7Q9Y5F8 929 aa6.66□□□□□ -1.34
CPSF7-215ENST00000536145 ACTL7AQ9Y615 435 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms