RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 GZMMP51124 257 aa17.3■□□□□ 0.36
RAB40C-203ENST00000535977 TLE2Q04725 743 aa17.3■□□□□ 0.36
RAB40C-203ENST00000535977 PRKCDQ05655 676 aa17.3■□□□□ 0.36
RAB40C-203ENST00000535977 LAPTM5Q13571 262 aa17.3■□□□□ 0.36
RAB40C-203ENST00000535977 GPR50Q13585 617 aa17.3■□□□□ 0.36
RAB40C-203ENST00000535977 LIPJQ5W064 366 aa17.3■□□□□ 0.36
RAB40C-203ENST00000535977 HORMAD1Q86X24 394 aa17.3■□□□□ 0.36
RAB40C-203ENST00000535977 CMTM8Q8IZV2 173 aa17.3■□□□□ 0.36
RAB40C-203ENST00000535977 FRS2Q8WU20 508 aa17.3■□□□□ 0.36
RAB40C-203ENST00000535977 NCLNQ969V3 563 aa17.3■□□□□ 0.36
RAB40C-203ENST00000535977 ZNF566Q969W8 418 aa17.3■□□□□ 0.36
RAB40C-203ENST00000535977 NEDD4LQ96PU5 975 aa17.3■□□□□ 0.36
RAB40C-203ENST00000535977 IKZF5Q9H5V7 419 aa17.3■□□□□ 0.36
RAB40C-203ENST00000535977 ZDHHC6Q9H6R6 413 aa17.3■□□□□ 0.36
RAB40C-203ENST00000535977 SERHLQ9NQF3 203 aa17.3■□□□□ 0.36
RAB40C-203ENST00000535977 MAT2BQ9NZL9 334 aa17.3■□□□□ 0.36
RAB40C-203ENST00000535977 WASH3PC4AMC7 463 aa17.3■□□□□ 0.36
RAB40C-203ENST00000535977 CTDSP2O14595 271 aa17.3■□□□□ 0.36
RAB40C-203ENST00000535977 CAPN5O15484 640 aaPredicted RBP17.3■□□□□ 0.36
RAB40C-203ENST00000535977 TGM5O43548 720 aa17.3■□□□□ 0.36
RAB40C-203ENST00000535977 EFCAB14O75071 495 aa17.3■□□□□ 0.36
RAB40C-203ENST00000535977 C1SP09871 688 aa17.3■□□□□ 0.36
RAB40C-203ENST00000535977 GLULP15104 373 aa17.3■□□□□ 0.36
RAB40C-203ENST00000535977 PRPS1L1P21108 318 aa17.3■□□□□ 0.36
RAB40C-203ENST00000535977 HLA-FP30511 346 aa17.3■□□□□ 0.36
RAB40C-203ENST00000535977 DCDC1P59894 354 aa17.3■□□□□ 0.36
RAB40C-203ENST00000535977 SRSF11Q05519 484 aaKnown RBP17.3■□□□□ 0.36
RAB40C-203ENST00000535977 TARDBPQ13148 414 aaKnown RBP eCLIP17.3■□□□□ 0.36
RAB40C-203ENST00000535977 PTCHD3Q3KNS1 767 aa17.3■□□□□ 0.36
RAB40C-203ENST00000535977 FRG2Q64ET8 278 aa17.3■□□□□ 0.36
RAB40C-203ENST00000535977 SDE2Q6IQ49 451 aa17.3■□□□□ 0.36
RAB40C-203ENST00000535977 DPY19L3Q6ZPD9 716 aa17.3■□□□□ 0.36
RAB40C-203ENST00000535977 NRARPQ7Z6K4 114 aa17.3■□□□□ 0.36
RAB40C-203ENST00000535977 B3GNT8Q7Z7M8 397 aa17.3■□□□□ 0.36
RAB40C-203ENST00000535977 HS6ST3Q8IZP7 471 aa17.3■□□□□ 0.36
RAB40C-203ENST00000535977 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.3■□□□□ 0.36
RAB40C-203ENST00000535977 SKA2Q8WVK7 121 aaPredicted RBP17.3■□□□□ 0.36
RAB40C-203ENST00000535977 PYURFQ96I23 114 aa17.3■□□□□ 0.36
RAB40C-203ENST00000535977 RIPOR3Q96MK2 946 aa17.3■□□□□ 0.36
RAB40C-203ENST00000535977 FRG2BQ96QU4 278 aa17.3■□□□□ 0.36
RAB40C-203ENST00000535977 HHIPQ96QV1 700 aa17.3■□□□□ 0.36
RAB40C-203ENST00000535977 PHOX2BQ99453 314 aa17.3■□□□□ 0.36
RAB40C-203ENST00000535977 TBCDQ9BTW9 1192 aa17.3■□□□□ 0.36
RAB40C-203ENST00000535977 PRDM8Q9NQV8 689 aa17.3■□□□□ 0.36
RAB40C-203ENST00000535977 C14orf119Q9NWQ9 140 aa17.3■□□□□ 0.36
RAB40C-203ENST00000535977 FADS2P1A8MWK0 482 aa17.29■□□□□ 0.36
RAB40C-203ENST00000535977 HS6ST1O60243 411 aa17.29■□□□□ 0.36
RAB40C-203ENST00000535977 CPNE3O75131 537 aaKnown RBP17.29■□□□□ 0.36
RAB40C-203ENST00000535977 FTH1P02794 183 aa17.29■□□□□ 0.36
RAB40C-203ENST00000535977 CSTF3Q12996 717 aaKnown RBP17.29■□□□□ 0.36
RAB40C-203ENST00000535977 IL18R1Q13478 541 aa17.29■□□□□ 0.36
RAB40C-203ENST00000535977 ZC3H12BQ5HYM0 836 aaKnown RBP17.29■□□□□ 0.36
RAB40C-203ENST00000535977 GDPD4Q6W3E5 623 aa17.29■□□□□ 0.36
RAB40C-203ENST00000535977 PYCR2Q96C36 320 aa17.29■□□□□ 0.36
RAB40C-203ENST00000535977 FCRL1Q96LA6 429 aa17.29■□□□□ 0.36
RAB40C-203ENST00000535977 FYTTD1Q96QD9 318 aaKnown RBP17.29■□□□□ 0.36
RAB40C-203ENST00000535977 B4GALT6Q9UBX8 382 aa17.29■□□□□ 0.36
RAB40C-203ENST00000535977 SAMD4AQ9UPU9 718 aaKnown RBP17.29■□□□□ 0.36
RAB40C-203ENST00000535977 MAPRE3Q9UPY8 281 aa17.29■□□□□ 0.36
RAB40C-203ENST00000535977 DLGAP4Q9Y2H0 992 aa17.29■□□□□ 0.36
RAB40C-203ENST00000535977 ORC6Q9Y5N6 252 aa17.29■□□□□ 0.36
RAB40C-203ENST00000535977 PLXNB3Q9ULL4 1909 aa17.29■□□□□ 0.36
RAB40C-203ENST00000535977 CCNDBP1O95273 360 aa17.29■□□□□ 0.36
RAB40C-203ENST00000535977 CTSAP10619 480 aa17.29■□□□□ 0.36
RAB40C-203ENST00000535977 JUPP14923 745 aa17.29■□□□□ 0.36
RAB40C-203ENST00000535977 AMD1P17707 334 aa17.29■□□□□ 0.36
RAB40C-203ENST00000535977 CBLP22681 906 aa17.29■□□□□ 0.36
RAB40C-203ENST00000535977 S100A5P33763 92 aa17.29■□□□□ 0.36
RAB40C-203ENST00000535977 AP2S1P53680 142 aaPredicted RBP17.29■□□□□ 0.36
RAB40C-203ENST00000535977 SLC35A2P78381 396 aa17.29■□□□□ 0.36
RAB40C-203ENST00000535977 FADDQ13158 208 aa17.29■□□□□ 0.36
RAB40C-203ENST00000535977 RAPSNQ13702 412 aa17.29■□□□□ 0.36
RAB40C-203ENST00000535977 LAIR1Q6GTX8 287 aa17.29■□□□□ 0.36
RAB40C-203ENST00000535977 ZNF517Q6ZMY9 492 aaPredicted RBP17.29■□□□□ 0.36
RAB40C-203ENST00000535977 SERPINA11Q86U17 422 aa17.29■□□□□ 0.36
RAB40C-203ENST00000535977 PGBD3Q8N328 593 aa17.29■□□□□ 0.36
RAB40C-203ENST00000535977 ASZ1Q8WWH4 475 aa17.29■□□□□ 0.36
RAB40C-203ENST00000535977 CARS2Q9HA77 564 aaKnown RBP17.29■□□□□ 0.36
RAB40C-203ENST00000535977 RANGRFQ9HD47 186 aaPredicted RBP17.29■□□□□ 0.36
RAB40C-203ENST00000535977 POLHQ9Y253 713 aa17.29■□□□□ 0.36
RAB40C-203ENST00000535977 HOXB9P17482 250 aaPredicted RBP17.28■□□□□ 0.36
RAB40C-203ENST00000535977 SDC1P18827 310 aa17.28■□□□□ 0.36
RAB40C-203ENST00000535977 PRKACGP22612 351 aa17.28■□□□□ 0.36
RAB40C-203ENST00000535977 RECQLP46063 649 aaPredicted RBP17.28■□□□□ 0.36
RAB40C-203ENST00000535977 POU6F2P78424 691 aaPredicted RBP17.28■□□□□ 0.36
RAB40C-203ENST00000535977 LRRC26Q2I0M4 334 aa17.28■□□□□ 0.36
RAB40C-203ENST00000535977 C1orf53Q5VUE5 145 aa17.28■□□□□ 0.36
RAB40C-203ENST00000535977 SPESP1Q6UW49 350 aa17.28■□□□□ 0.36
RAB40C-203ENST00000535977 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.28■□□□□ 0.36
RAB40C-203ENST00000535977 FBXL6Q8N531 539 aa17.28■□□□□ 0.36
RAB40C-203ENST00000535977 FAM86B1Q8N7N1 296 aa17.28■□□□□ 0.36
RAB40C-203ENST00000535977 AIFM2Q9BRQ8 373 aa17.28■□□□□ 0.36
RAB40C-203ENST00000535977 SLC46A2Q9BY10 475 aa17.28■□□□□ 0.36
RAB40C-203ENST00000535977 DUSP21Q9H596 190 aa17.28■□□□□ 0.36
RAB40C-203ENST00000535977 ACOT13Q9NPJ3 140 aa17.28■□□□□ 0.36
RAB40C-203ENST00000535977 ASAH2Q9NR71 780 aa17.28■□□□□ 0.36
RAB40C-203ENST00000535977 BTBD3Q9Y2F9 522 aa17.28■□□□□ 0.36
RAB40C-203ENST00000535977 A0A1W2PRU2 124 aa17.28■□□□□ 0.36
RAB40C-203ENST00000535977 CLDN24A6NM45 220 aa17.28■□□□□ 0.36
RAB40C-203ENST00000535977 RFXANKO14593 260 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms