RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 TGIF2Q9GZN2 237 aa21.53■■□□□ 1.04
SFSWAP-204ENST00000535399 IPPKQ9H8X2 491 aa21.53■■□□□ 1.04
SFSWAP-204ENST00000535399 MKKSQ9NPJ1 570 aaPredicted RBP21.53■■□□□ 1.04
SFSWAP-204ENST00000535399 PLAAQ9Y263 795 aa21.53■■□□□ 1.04
SFSWAP-204ENST00000535399 LRIT2A6NDA9 550 aa21.52■■□□□ 1.04
SFSWAP-204ENST00000535399 ANKDD1BA6NHY2 528 aa21.52■■□□□ 1.04
SFSWAP-204ENST00000535399 C4orf51C9J302 202 aa21.52■■□□□ 1.04
SFSWAP-204ENST00000535399 DLX3O60479 287 aa21.52■■□□□ 1.04
SFSWAP-204ENST00000535399 GALR3O60755 368 aaPredicted RBP21.52■■□□□ 1.04
SFSWAP-204ENST00000535399 GLRA3O75311 464 aa21.52■■□□□ 1.04
SFSWAP-204ENST00000535399 RDH16O75452 317 aa21.52■■□□□ 1.04
SFSWAP-204ENST00000535399 FAM87AP0C7U9 286 aa21.52■■□□□ 1.04
SFSWAP-204ENST00000535399 TAC1P20366 129 aa21.52■■□□□ 1.04
SFSWAP-204ENST00000535399 HNRNPH1P31943 449 aaKnown RBP21.52■■□□□ 1.04
SFSWAP-204ENST00000535399 CRHR1P34998 444 aa21.52■■□□□ 1.04
SFSWAP-204ENST00000535399 HNF4AP41235 474 aa21.52■■□□□ 1.04
SFSWAP-204ENST00000535399 CCR10P46092 362 aa21.52■■□□□ 1.04
SFSWAP-204ENST00000535399 SLC18A2Q05940 514 aa21.52■■□□□ 1.04
SFSWAP-204ENST00000535399 KLC1Q07866 573 aa21.52■■□□□ 1.04
SFSWAP-204ENST00000535399 ATP1A4Q13733 1029 aa21.52■■□□□ 1.04
SFSWAP-204ENST00000535399 DEFB134Q4QY38 66 aa21.52■■□□□ 1.04
SFSWAP-204ENST00000535399 SOWAHCQ53LP3 525 aaPredicted RBP21.52■■□□□ 1.04
SFSWAP-204ENST00000535399 MED27Q6P2C8 311 aa21.52■■□□□ 1.04
SFSWAP-204ENST00000535399 ABHD13Q7L211 337 aa21.52■■□□□ 1.04
SFSWAP-204ENST00000535399 LAPTM4BQ86VI4 370 aa21.52■■□□□ 1.04
SFSWAP-204ENST00000535399 LAS2Q8IYD9 372 aa21.52■■□□□ 1.04
SFSWAP-204ENST00000535399 LSM14AQ8ND56 463 aaKnown RBP21.52■■□□□ 1.04
SFSWAP-204ENST00000535399 UBE2E3Q969T4 207 aa21.52■■□□□ 1.04
SFSWAP-204ENST00000535399 C1QTNF3Q9BXJ4 246 aa21.52■■□□□ 1.04
SFSWAP-204ENST00000535399 NOL11Q9H8H0 719 aaKnown RBP21.52■■□□□ 1.04
SFSWAP-204ENST00000535399 ZBTB26Q9HCK0 441 aa21.52■■□□□ 1.04
SFSWAP-204ENST00000535399 C14orf105Q9NVL8 296 aa21.52■■□□□ 1.04
SFSWAP-204ENST00000535399 HCN3Q9P1Z3 774 aa21.52■■□□□ 1.04
SFSWAP-204ENST00000535399 ATRXP46100 2492 aa21.51■■□□□ 1.03
SFSWAP-204ENST00000535399 URADA6NGE7 173 aa21.51■■□□□ 1.03
SFSWAP-204ENST00000535399 ZNF860A6NHJ4 632 aa21.51■■□□□ 1.03
SFSWAP-204ENST00000535399 OR7A17O14581 309 aa21.51■■□□□ 1.03
SFSWAP-204ENST00000535399 UGDHO60701 494 aa21.51■■□□□ 1.03
SFSWAP-204ENST00000535399 KRT4P19013 534 aa21.51■■□□□ 1.03
SFSWAP-204ENST00000535399 MMP11P24347 488 aa21.51■■□□□ 1.03
SFSWAP-204ENST00000535399 ATP5F1P24539 256 aaPredicted RBP21.51■■□□□ 1.03
SFSWAP-204ENST00000535399 RAB8AP61006 207 aa21.51■■□□□ 1.03
SFSWAP-204ENST00000535399 STXBP1P61764 594 aaKnown RBP21.51■■□□□ 1.03
SFSWAP-204ENST00000535399 ADPRMQ3LIE5 342 aa21.51■■□□□ 1.03
SFSWAP-204ENST00000535399 LIPJQ5W064 366 aa21.51■■□□□ 1.03
SFSWAP-204ENST00000535399 APLFQ8IW19 511 aaPredicted RBP21.51■■□□□ 1.03
SFSWAP-204ENST00000535399 L3MBTL4Q8NA19 623 aa21.51■■□□□ 1.03
SFSWAP-204ENST00000535399 OR7G3Q8NG95 312 aa21.51■■□□□ 1.03
SFSWAP-204ENST00000535399 OR51Q1Q8NH59 317 aa21.51■■□□□ 1.03
SFSWAP-204ENST00000535399 ZNF483Q8TF39 744 aaPredicted RBP21.51■■□□□ 1.03
SFSWAP-204ENST00000535399 ZNF473Q8WTR7 871 aaKnown RBP21.51■■□□□ 1.03
SFSWAP-204ENST00000535399 CCT6BQ92526 530 aa21.51■■□□□ 1.03
SFSWAP-204ENST00000535399 MS4A6EQ96DS6 147 aa21.51■■□□□ 1.03
SFSWAP-204ENST00000535399 CRB3Q9BUF7 120 aa21.51■■□□□ 1.03
SFSWAP-204ENST00000535399 ACTR8Q9H981 624 aa21.51■■□□□ 1.03
SFSWAP-204ENST00000535399 DNAJB6O75190 326 aa21.5■■□□□ 1.03
SFSWAP-204ENST00000535399 BMP10O95393 424 aa21.5■■□□□ 1.03
SFSWAP-204ENST00000535399 PROCP04070 461 aa21.5■■□□□ 1.03
SFSWAP-204ENST00000535399 POLE2P56282 527 aa21.5■■□□□ 1.03
SFSWAP-204ENST00000535399 CPZQ66K79 652 aa21.5■■□□□ 1.03
SFSWAP-204ENST00000535399 RPS27LQ71UM5 84 aaKnown RBP21.5■■□□□ 1.03
SFSWAP-204ENST00000535399 TRABD2AQ86V40 505 aa21.5■■□□□ 1.03
SFSWAP-204ENST00000535399 C4orf33Q8N1A6 199 aa21.5■■□□□ 1.03
SFSWAP-204ENST00000535399 OR52B6Q8NGF0 335 aa21.5■■□□□ 1.03
SFSWAP-204ENST00000535399 OR5T3Q8NGG3 340 aa21.5■■□□□ 1.03
SFSWAP-204ENST00000535399 GAL3ST3Q96A11 431 aa21.5■■□□□ 1.03
SFSWAP-204ENST00000535399 NACC2Q96BF6 587 aa21.5■■□□□ 1.03
SFSWAP-204ENST00000535399 IP6K3Q96PC2 410 aa21.5■■□□□ 1.03
SFSWAP-204ENST00000535399 ARHGAP9Q9BRR9 750 aa21.5■■□□□ 1.03
SFSWAP-204ENST00000535399 SEMA3GQ9NS98 782 aa21.5■■□□□ 1.03
SFSWAP-204ENST00000535399 C3orf18Q9UK00 162 aa21.5■■□□□ 1.03
SFSWAP-204ENST00000535399 HS3ST3B1Q9Y662 390 aa21.5■■□□□ 1.03
SFSWAP-204ENST00000535399 ARGFXA6NJG6 315 aa21.49■■□□□ 1.03
SFSWAP-204ENST00000535399 JRKO75564 520 aa21.49■■□□□ 1.03
SFSWAP-204ENST00000535399 PCNAP12004 261 aa21.49■■□□□ 1.03
SFSWAP-204ENST00000535399 CCT5P48643 541 aa21.49■■□□□ 1.03
SFSWAP-204ENST00000535399 EFNA3P52797 238 aa21.49■■□□□ 1.03
SFSWAP-204ENST00000535399 PRKAA2P54646 552 aa21.49■■□□□ 1.03
SFSWAP-204ENST00000535399 HERVK_113P63132 956 aa21.49■■□□□ 1.03
SFSWAP-204ENST00000535399 TRAF3Q13114 568 aa21.49■■□□□ 1.03
SFSWAP-204ENST00000535399 LY6DQ14210 128 aa21.49■■□□□ 1.03
SFSWAP-204ENST00000535399 UNC50Q53HI1 259 aa21.49■■□□□ 1.03
SFSWAP-204ENST00000535399 ZNF678Q5SXM1 525 aa21.49■■□□□ 1.03
SFSWAP-204ENST00000535399 NIPAL1Q6NVV3 410 aa21.49■■□□□ 1.03
SFSWAP-204ENST00000535399 MYLK4Q86YV6 388 aaPredicted RBP21.49■■□□□ 1.03
SFSWAP-204ENST00000535399 TMEM237Q96Q45 408 aa21.49■■□□□ 1.03
SFSWAP-204ENST00000535399 NTMT1Q9BV86 223 aa21.49■■□□□ 1.03
SFSWAP-204ENST00000535399 ERVK-6Q9BXR3 956 aa21.49■■□□□ 1.03
SFSWAP-204ENST00000535399 TRIM55Q9BYV6 548 aa21.49■■□□□ 1.03
SFSWAP-204ENST00000535399 ING2Q9H160 280 aa21.49■■□□□ 1.03
SFSWAP-204ENST00000535399 P4HTMQ9NXG6 502 aa21.49■■□□□ 1.03
SFSWAP-204ENST00000535399 RNF11Q9Y3C5 154 aa21.49■■□□□ 1.03
SFSWAP-204ENST00000535399 TSC22D4Q9Y3Q8 395 aa21.49■■□□□ 1.03
SFSWAP-204ENST00000535399 PIEZO2Q9H5I5 2752 aa21.49■■□□□ 1.03
SFSWAP-204ENST00000535399 PCSK5Q92824 1860 aa21.49■■□□□ 1.03
SFSWAP-204ENST00000535399 H0YIV9 168 aa21.48■■□□□ 1.03
SFSWAP-204ENST00000535399 SOCS6O14544 535 aa21.48■■□□□ 1.03
SFSWAP-204ENST00000535399 COPEO14579 308 aa21.48■■□□□ 1.03
SFSWAP-204ENST00000535399 ERI3O43414 337 aaKnown RBP21.48■■□□□ 1.03
SFSWAP-204ENST00000535399 PLIN3O60664 434 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms