RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	DHRS1	Q96LJ7	313 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	AQP12B	A6NM10	295 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	GPR37L1	O60883	481 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	ARSF	P54793	590 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	FOXK1	P85037	733 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	AQP12A	Q8IXF9	295 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	PKP4	Q99569	1192 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	REEP4	Q9H6H4	257 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	GLS2	Q9UI32	602 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	ING4	Q9UNL4	249 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	GLOD5	A6NK44	160 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	TMEM189-UBE2V1	I3L0A0	370 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532		K7ERQ8	282 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	C6orf47	O95873	294 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	OPN1SW	P03999	348 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	PGR	P06401	933 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	CEBPB	P17676	345 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	PITX1	P78337	314 aa	Predicted RBP	15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	CHAF1B	Q13112	559 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	FGL2	Q14314	439 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	CCDC80	Q76M96	950 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	ZC3H3	Q8IXZ2	948 aa	Known RBP	15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	MRGPRX2	Q96LB1	330 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	CASD1	Q96PB1	797 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	CD180	Q99467	661 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	TRPV5	Q9NQA5	729 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	ASB6	Q9NWX5	421 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	PPP4R1L	Q9P1A2	415 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	TMEM5	Q9Y2B1	443 aa		15.2	■□□□□ 0.02
NCAPD3-213	ENST00000534532	SOX1	O00570	391 aa	Predicted RBP	15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	CSTF1	Q05048	431 aa	Known RBP	15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	PON3	Q15166	354 aa		15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	TMEM225	Q6GV28	225 aa		15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	TTLL10	Q6ZVT0	673 aa		15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	FGF13	Q92913	245 aa		15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	NKD1	Q969G9	470 aa		15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	LINC00597	Q9H2U6	94 aa		15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	ACOT7	O00154	380 aa		15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	OR1I1	O60431	355 aa		15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	RPS3A	P61247	264 aa	Known RBP	15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	BNIP1	Q12981	228 aa		15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	FAM189A2	Q15884	450 aa		15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	FLYWCH1	Q4VC44	716 aa		15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	OR4C15	Q8NGM1	316 aa		15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	NODAL	Q96S42	347 aa		15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	FBRSL1	Q9HCM7	1045 aa	Known RBP	15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	ZDHHC18	Q9NUE0	388 aa		15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	GRXCR1	A8MXD5	290 aa		15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	TBX1	O43435	398 aa		15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	MAFK	O60675	156 aa		15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	F7	P08709	466 aa	Predicted RBP	15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	PROZ	P22891	400 aa		15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	DNAJA1	P31689	397 aa	Known RBP	15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	SPINT3	P49223	89 aa		15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	ALDH3A2	P51648	485 aa		15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	CAPZA1	P52907	286 aa		15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	CATSPERE	Q5SY80	951 aa		15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	NOXRED1	Q6NXP6	359 aa		15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	PAMR1	Q6UXH9	720 aa		15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	KLHL36	Q8N4N3	616 aa		15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	SIGLEC10	Q96LC7	697 aa		15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	RANBP9	Q96S59	729 aa		15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	MTRF1	O75570	445 aa	Known RBP	15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	ABHD18	Q0P651	414 aa		15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	TMEM198	Q66K66	360 aa		15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	JPH3	Q8WXH2	748 aa	Predicted RBP	15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	DIRAS2	Q96HU8	199 aa		15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	ING3	Q9NXR8	418 aa		15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	TAS2R7	Q9NYW3	318 aa		15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	GRHPR	Q9UBQ7	328 aa		15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	IFT52	Q9Y366	437 aa		15.19	■□□□□ 0.02
NCAPD3-213	ENST00000534532	HCRTR2	O43614	444 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	ITGA10	O75578	1167 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	PROS1	P07225	676 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	EN2	P19622	333 aa	Predicted RBP	15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	HMGCL	P35914	325 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	RNASE12	Q5GAN4	147 aa	Known RBP	15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	FITM2	Q8N6M3	262 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	FAM156A	Q8NDB6	213 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	CST11	Q9H112	138 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	FAM227A	F5H4B4	570 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	BLOC1S5-TXNDC5	H3BN57	136 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	CSTB	P04080	98 aa	Known RBP	15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	G6PD	P11413	515 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	HSD3B1	P14060	373 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	CCNO	P22674	350 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	HSD3B2	P26439	372 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	OTX2	P32243	289 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	SMS	P52788	366 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	UNC5D	Q6UXZ4	953 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	TIFAB	Q6ZNK6	161 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	SLCO6A1	Q86UG4	719 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	IQCF2	Q8IXL9	164 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	GPALPP1	Q8IXQ4	340 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	FAM86B1	Q8N7N1	296 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	15.18	■□□□□ 0.02	7e-9	■■■□□ 17.9
NCAPD3-213	ENST00000534532	HHIP	Q96QV1	700 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	LPAR4	Q99677	370 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	SLC39A3	Q9BRY0	314 aa		15.18	■□□□□ 0.02
NCAPD3-213	ENST00000534532	CPEB1	Q9BZB8	566 aa	Known RBP	15.18	■□□□□ 0.02

Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms