RNA–Protein interactions for RNA: ENST00000533451.1

UBASH3B-208, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 2

Gene UBASH3B, Length 1,032 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-208ENST00000533451 GGT5P36269 586 aa10.87□□□□□ -0.67
UBASH3B-208ENST00000533451 PGDP52209 483 aa10.87□□□□□ -0.67
UBASH3B-208ENST00000533451 EMP2P54851 167 aa10.87□□□□□ -0.67
UBASH3B-208ENST00000533451 ALDH18A1P54886 795 aaKnown RBP10.87□□□□□ -0.67
UBASH3B-208ENST00000533451 VSNL1P62760 191 aa10.87□□□□□ -0.67
UBASH3B-208ENST00000533451 OLR1P78380 273 aa10.87□□□□□ -0.67
UBASH3B-208ENST00000533451 EEF1A2Q05639 463 aaKnown RBP10.87□□□□□ -0.67
UBASH3B-208ENST00000533451 PWP1Q13610 501 aa10.87□□□□□ -0.67
UBASH3B-208ENST00000533451 DDX39BQ13838 428 aaKnown RBP10.87□□□□□ -0.67
UBASH3B-208ENST00000533451 DOC2AQ14183 400 aa10.87□□□□□ -0.67
UBASH3B-208ENST00000533451 SETDB1Q15047 1291 aa10.87□□□□□ -0.67
UBASH3B-208ENST00000533451 TUBB8Q3ZCM7 444 aa10.87□□□□□ -0.67
UBASH3B-208ENST00000533451 LACTB2Q53H82 288 aaPredicted RBP10.87□□□□□ -0.67
UBASH3B-208ENST00000533451 MED25Q71SY5 747 aa10.87□□□□□ -0.67
UBASH3B-208ENST00000533451 PTRH1Q86Y79 214 aaKnown RBP10.87□□□□□ -0.67
UBASH3B-208ENST00000533451 PTGR2Q8N8N7 351 aaPredicted RBP10.87□□□□□ -0.67
UBASH3B-208ENST00000533451 TMEM102Q8N9M5 508 aaPredicted RBP10.87□□□□□ -0.67
UBASH3B-208ENST00000533451 EIF1ADQ8N9N8 165 aaKnown RBP10.87□□□□□ -0.67
UBASH3B-208ENST00000533451 ANKRD53Q8N9V6 530 aa10.87□□□□□ -0.67
UBASH3B-208ENST00000533451 TTLQ8NG68 377 aa10.87□□□□□ -0.67
UBASH3B-208ENST00000533451 UBTD2Q8WUN7 234 aa10.87□□□□□ -0.67
UBASH3B-208ENST00000533451 METTL21AQ8WXB1 218 aa10.87□□□□□ -0.67
UBASH3B-208ENST00000533451 ATP6V1E2Q96A05 226 aa10.87□□□□□ -0.67
UBASH3B-208ENST00000533451 PHF21BQ96EK2 531 aa10.87□□□□□ -0.67
UBASH3B-208ENST00000533451 PTCD3Q96EY7 689 aaKnown RBP10.87□□□□□ -0.67
UBASH3B-208ENST00000533451 FER1L6-AS2Q96M78 137 aa10.87□□□□□ -0.67
UBASH3B-208ENST00000533451 EFCAB11Q9BUY7 163 aa10.87□□□□□ -0.67
UBASH3B-208ENST00000533451 SLC25A18Q9H1K4 315 aa10.87□□□□□ -0.67
UBASH3B-208ENST00000533451 RHBGQ9H310 441 aa10.87□□□□□ -0.67
UBASH3B-208ENST00000533451 ACTR8Q9H981 624 aa10.87□□□□□ -0.67
UBASH3B-208ENST00000533451 ENAMQ9NRM1 1142 aa10.87□□□□□ -0.67
UBASH3B-208ENST00000533451 SEMA3GQ9NS98 782 aa10.87□□□□□ -0.67
UBASH3B-208ENST00000533451 MKL2Q9ULH7 1088 aa10.87□□□□□ -0.67
UBASH3B-208ENST00000533451 TP53TG5Q9Y2B4 290 aa10.87□□□□□ -0.67
UBASH3B-208ENST00000533451 ATMQ13315 3056 aa10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 A0A0G2JN53 185 aa10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 LRRC14BA6NHZ5 514 aa10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 IDSB3KWA1 339 aa10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 H0YIG0 161 aa10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 MASP2O00187 686 aa10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 ERI3O43414 337 aaKnown RBP10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 SH3BGRLO75368 114 aa10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 CDC123O75794 336 aaPredicted RBP10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 SHBGP04278 402 aa10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 COL6A2P12110 1019 aa10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 GCAP28676 217 aa10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 EEF1DP29692 281 aaKnown RBP10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 MAGEA12P43365 314 aa10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 STXBP1P61764 594 aaKnown RBP10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 SNRPNP63162 240 aaKnown RBP10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 IFFO1Q0D2I5 559 aa10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 LAPTM5Q13571 262 aa10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 TECRLQ5HYJ1 363 aa10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 DCAF10Q5QP82 559 aa10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 ASB18Q6ZVZ8 466 aa10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 PDSS2Q86YH6 399 aa10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 ZC3H7AQ8IWR0 971 aaKnown RBP10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 KLHDC8AQ8IYD2 350 aa10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 ZNF843Q8N446 348 aa10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 OR5T3Q8NGG3 340 aa10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 OR51Q1Q8NH59 317 aa10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 NT5CQ8TCD5 201 aa10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 ISL2Q96A47 359 aa10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 C8orf44Q96CB5 159 aa10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 TM4SF19Q96DZ7 209 aa10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 PEX11GQ96HA9 241 aa10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 GPR78Q96P69 363 aa10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 TXLNGYQ9BZA5 131 aa10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 EHD1Q9H4M9 534 aa10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 COPS7BQ9H9Q2 264 aaPredicted RBP10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 TUBD1Q9UJT1 453 aa10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 TMCO1Q9UM00 188 aa10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 TNPO3Q9Y5L0 923 aaKnown RBP10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 SLC22A7Q9Y694 548 aa10.86□□□□□ -0.67
UBASH3B-208ENST00000533451 TLDC2A0PJX2 215 aa10.85□□□□□ -0.67
UBASH3B-208ENST00000533451 CCDC189A1A4V9 331 aa10.85□□□□□ -0.67
UBASH3B-208ENST00000533451 VSTM2BA6NLU5 285 aa10.85□□□□□ -0.67
UBASH3B-208ENST00000533451 AGPSO00116 658 aa10.85□□□□□ -0.67
UBASH3B-208ENST00000533451 PSMD12O00232 456 aaPredicted RBP10.85□□□□□ -0.67
UBASH3B-208ENST00000533451 SLC28A2O43868 658 aa10.85□□□□□ -0.67
UBASH3B-208ENST00000533451 GALR3O60755 368 aaPredicted RBP10.85□□□□□ -0.67
UBASH3B-208ENST00000533451 JRKO75564 520 aa10.85□□□□□ -0.67
UBASH3B-208ENST00000533451 C1QL1O75973 258 aa10.85□□□□□ -0.67
UBASH3B-208ENST00000533451 SIX3O95343 332 aaPredicted RBP10.85□□□□□ -0.67
UBASH3B-208ENST00000533451 ONECUT2O95948 504 aa10.85□□□□□ -0.67
UBASH3B-208ENST00000533451 MTHFD2P13995 350 aa10.85□□□□□ -0.67
UBASH3B-208ENST00000533451 TAC1P20366 129 aa10.85□□□□□ -0.67
UBASH3B-208ENST00000533451 HPDP32754 393 aaPredicted RBP10.85□□□□□ -0.67
UBASH3B-208ENST00000533451 HSD17B3P37058 310 aa10.85□□□□□ -0.67
UBASH3B-208ENST00000533451 PIK3CGP48736 1102 aa10.85□□□□□ -0.67
UBASH3B-208ENST00000533451 PLA2G16P53816 162 aa10.85□□□□□ -0.67
UBASH3B-208ENST00000533451 BTN3A2P78410 334 aa10.85□□□□□ -0.67
UBASH3B-208ENST00000533451 TGM3Q08188 693 aa10.85□□□□□ -0.67
UBASH3B-208ENST00000533451 GTF2H2Q13888 395 aa10.85□□□□□ -0.67
UBASH3B-208ENST00000533451 COLEC12Q5KU26 742 aa10.85□□□□□ -0.67
UBASH3B-208ENST00000533451 ADNP2Q6IQ32 1131 aa10.85□□□□□ -0.67
UBASH3B-208ENST00000533451 NIPAL1Q6NVV3 410 aa10.85□□□□□ -0.67
UBASH3B-208ENST00000533451 GTF2H2CQ6P1K8 395 aa10.85□□□□□ -0.67
UBASH3B-208ENST00000533451 MED27Q6P2C8 311 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms