RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 MKS1Q9NXB0 559 aa7.62□□□□□ -1.19
CSRP1-218ENST00000533402 MS4A12Q9NXJ0 267 aa7.62□□□□□ -1.19
CSRP1-218ENST00000533402 TRPS1Q9UHF7 1281 aa7.62□□□□□ -1.19
CSRP1-218ENST00000533402 ZNF230Q9UIE0 474 aaPredicted RBP7.62□□□□□ -1.19
CSRP1-218ENST00000533402 ZNF831Q5JPB2 1677 aa7.62□□□□□ -1.19
CSRP1-218ENST00000533402 LAMB1P07942 1786 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 TKTL1P51854 596 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 CLCQ05315 142 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 SP140Q13342 867 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 SPATS1Q496A3 300 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 ATXN7L2Q5T6C5 722 aaPredicted RBP7.61□□□□□ -1.19
CSRP1-218ENST00000533402 NAPRTQ6XQN6 538 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 CNOT9Q92600 299 aaKnown RBP7.61□□□□□ -1.19
CSRP1-218ENST00000533402 BIRC7Q96CA5 298 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 PCDHGB5Q9Y5G0 923 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.61□□□□□ -1.19
CSRP1-218ENST00000533402 MOXD2PA6NHM9 499 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 MAGEB17A8MXT2 336 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 BCAS1O75363 584 aaPredicted RBP7.61□□□□□ -1.19
CSRP1-218ENST00000533402 KAT7O95251 611 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 LYPLA2O95372 231 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 ALDOBP05062 364 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 SSTR2P30874 369 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 GNALP38405 381 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 FOXM1Q08050 763 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 SELPLGQ14242 412 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 SEC23BQ15437 767 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 RABL3Q5HYI8 236 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.61□□□□□ -1.19
CSRP1-218ENST00000533402 NEIL3Q8TAT5 605 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 LGMNQ99538 433 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 COLEC10Q9Y6Z7 277 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 A8MUA0 341 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 E5RJQ4 531 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 RFXAPO00287 272 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 KLRC4O43908 158 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 S100A8P05109 93 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 AGXTP21549 392 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 SLC5A2P31639 672 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 RFC2P35250 354 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 KCNC1P48547 511 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 SELENOVP59797 346 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 ATP6AP1Q15904 470 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 ZNF311Q5JNZ3 666 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 PPP1R26Q5T8A7 1209 aaPredicted RBP7.61□□□□□ -1.19
CSRP1-218ENST00000533402 SLC26A9Q7LBE3 791 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 NRROSQ86YC3 692 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 ARHGAP12Q8IWW6 846 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 NATD1Q8N6N6 113 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 CHDHQ8NE62 594 aaPredicted RBP7.61□□□□□ -1.19
CSRP1-218ENST00000533402 SLC22A17Q8WUG5 538 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 LRRN4Q8WUT4 740 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 NRG4Q8WWG1 115 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 ACOT11Q8WXI4 607 aaPredicted RBP7.61□□□□□ -1.19
CSRP1-218ENST00000533402 RBPMSQ93062 196 aaKnown RBP7.61□□□□□ -1.19
CSRP1-218ENST00000533402 NKD2Q969F2 451 aaPredicted RBP7.61□□□□□ -1.19
CSRP1-218ENST00000533402 SYT4Q9H2B2 425 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 MEAF6Q9HAF1 191 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 AGO4Q9HCK5 861 aaKnown RBP7.61□□□□□ -1.19
CSRP1-218ENST00000533402 POM121CA8CG34 1229 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 A8MVJ9 347 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 PCDH17O14917 1159 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 HMGN1P05114 100 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 HLA-EP13747 358 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 SPRED3Q2MJR0 410 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 ARMC12Q5T9G4 340 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 LIPKQ5VXJ0 399 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 PDE12Q6L8Q7 609 aaKnown RBP7.61□□□□□ -1.19
CSRP1-218ENST00000533402 EPGNQ6UW88 154 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 PLPPR4Q7Z2D5 763 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 GLB1L3Q8NCI6 653 aaPredicted RBP7.61□□□□□ -1.19
CSRP1-218ENST00000533402 TSTD1Q8NFU3 115 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 DZANK1Q9NVP4 752 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 ZNF214Q9UL59 606 aaPredicted RBP7.61□□□□□ -1.19
CSRP1-218ENST00000533402 CDH10Q9Y6N8 788 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 CNTRLQ7Z7A1 2325 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 TPST2O60704 377 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 KCNAB2Q13303 367 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 CHRDL2Q6WN34 429 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 CREB3L2Q70SY1 520 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 PIWIL3Q7Z3Z3 882 aaKnown RBP7.61□□□□□ -1.19
CSRP1-218ENST00000533402 PHF13Q86YI8 300 aaPredicted RBP7.61□□□□□ -1.19
CSRP1-218ENST00000533402 FBXO16Q8IX29 292 aaPredicted RBP7.61□□□□□ -1.19
CSRP1-218ENST00000533402 RAVER1Q8IY67 606 aaKnown RBP7.61□□□□□ -1.19
CSRP1-218ENST00000533402 ANKFN1Q8N957 763 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.61□□□□□ -1.19
CSRP1-218ENST00000533402 ST7LQ8TDW4 575 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 APOLD1Q96LR9 279 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 PCDHB18PQ96TA0 734 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 GHRLQ9UBU3 117 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 PSMD9O00233 223 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 SHOXO15266 292 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 MITFO75030 526 aaPredicted RBP7.61□□□□□ -1.19
CSRP1-218ENST00000533402 ZNF821O75541 412 aaPredicted RBP7.61□□□□□ -1.19
CSRP1-218ENST00000533402 AHSA1O95433 338 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 CALCAP01258 141 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 SNRNP70P08621 437 aaKnown RBP7.61□□□□□ -1.19
CSRP1-218ENST00000533402 PRKACGP22612 351 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 CAMLGP49069 296 aa7.61□□□□□ -1.19
CSRP1-218ENST00000533402 ZNF280AP59817 542 aaPredicted RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms