RNA–Protein interactions for RNA: ENST00000533333.5

PAX6-228, Transcript of paired box 6, humanhuman

TSL 2

Gene PAX6, Length 6,173 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-228ENST00000533333 ITPAQ9BY32 194 aa17.14■□□□□ 0.33
PAX6-228ENST00000533333 C11orf49Q9H6J7 331 aa17.14■□□□□ 0.33
PAX6-228ENST00000533333 ZNF850A8MQ14 1090 aa17.14■□□□□ 0.33
PAX6-228ENST00000533333 SLC22A1O15245 554 aa17.14■□□□□ 0.33
PAX6-228ENST00000533333 TLX2O43763 284 aaPredicted RBP17.14■□□□□ 0.33
PAX6-228ENST00000533333 GATA5Q9BWX5 397 aaPredicted RBP17.14■□□□□ 0.33
PAX6-228ENST00000533333 TMEM98Q9Y2Y6 226 aa17.14■□□□□ 0.33
PAX6-228ENST00000533333 DISP2A7MBM2 1401 aa17.14■□□□□ 0.33
PAX6-228ENST00000533333 RAB30Q15771 203 aa17.14■□□□□ 0.33
PAX6-228ENST00000533333 HMBOX1Q6NT76 420 aa17.14■□□□□ 0.33
PAX6-228ENST00000533333 ADGRD1Q6QNK2 874 aa17.14■□□□□ 0.33
PAX6-228ENST00000533333 DCDC5Q6ZRR9 648 aa17.14■□□□□ 0.33
PAX6-228ENST00000533333 RELL1Q8IUW5 271 aa17.14■□□□□ 0.33
PAX6-228ENST00000533333 CELF5Q8N6W0 485 aaKnown RBP17.14■□□□□ 0.33
PAX6-228ENST00000533333 GATSQ8NAP1 163 aa17.14■□□□□ 0.33
PAX6-228ENST00000533333 GABRDO14764 452 aa17.14■□□□□ 0.33
PAX6-228ENST00000533333 PROM1O43490 865 aa17.14■□□□□ 0.33
PAX6-228ENST00000533333 POP7O75817 140 aaKnown RBP17.14■□□□□ 0.33
PAX6-228ENST00000533333 CD48P09326 243 aa17.14■□□□□ 0.33
PAX6-228ENST00000533333 CCND3P30281 292 aaPredicted RBP17.14■□□□□ 0.33
PAX6-228ENST00000533333 DUOXA1Q1HG43 343 aa17.14■□□□□ 0.33
PAX6-228ENST00000533333 FCAMRQ8WWV6 532 aa17.14■□□□□ 0.33
PAX6-228ENST00000533333 TMEM109Q9BVC6 243 aa17.14■□□□□ 0.33
PAX6-228ENST00000533333 RBCK1Q9BYM8 510 aa17.14■□□□□ 0.33
PAX6-228ENST00000533333 ATG5Q9H1Y0 275 aa17.14■□□□□ 0.33
PAX6-228ENST00000533333 SLC22A14Q9Y267 594 aa17.14■□□□□ 0.33
PAX6-228ENST00000533333 CMAHPQ9Y471 501 aa17.14■□□□□ 0.33
PAX6-228ENST00000533333 MYBPHLA2RUH7 354 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 ANKRD34BA5PLL1 514 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 CHRNA1P02708 482 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 GRIA1P42261 906 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 SOX2P48431 317 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 TAS2R43P59537 309 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 RPS3AP61247 264 aaKnown RBP17.13■□□□□ 0.33
PAX6-228ENST00000533333 SLC35F1Q5T1Q4 408 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 ABHD15Q6UXT9 468 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 TMEM234Q8WY98 164 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 MMABQ96EY8 250 aaPredicted RBP17.13■□□□□ 0.33
PAX6-228ENST00000533333 SLC32A1Q9H598 525 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 KCNIP1Q9NZI2 227 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 MT-ND5P03915 603 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 NUDT6P53370 316 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 AQP4P55087 323 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 ERN2Q76MJ5 926 aaKnown RBP17.13■□□□□ 0.33
PAX6-228ENST00000533333 STON2Q8WXE9 905 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 PGAM5Q96HS1 289 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 RAD9AQ99638 391 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 EPHA6Q9UF33 1036 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 ASB3Q9Y575 518 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 C2orf72A6NCS6 295 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 EI24O14681 340 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 UNC13BO14795 1591 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 NIPSNAP2O75323 286 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 LRCH4O75427 683 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 CDKN2BP42772 138 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 PSPHP78330 225 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 GSTM4Q03013 218 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 RPA4Q13156 261 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 OR56B2PQ8NGI1 322 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 SPRYD4Q8WW59 207 aaPredicted RBP17.13■□□□□ 0.33
PAX6-228ENST00000533333 AUTS2Q8WXX7 1259 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 DNAJA3Q96EY1 480 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 PAPOLGQ9BWT3 736 aaKnown RBP17.13■□□□□ 0.33
PAX6-228ENST00000533333 RANBP3Q9H6Z4 567 aaPredicted RBP17.13■□□□□ 0.33
PAX6-228ENST00000533333 ZFR2Q9UPR6 939 aaKnown RBP17.13■□□□□ 0.33
PAX6-228ENST00000533333 IFNA4P05014 189 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 RPS2P15880 293 aaKnown RBP17.13■□□□□ 0.33
PAX6-228ENST00000533333 ACADVLP49748 655 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 CDK6Q00534 326 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 DAG1Q14118 895 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 ZNF584Q8IVC4 421 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 UBQLNLQ8IYU4 475 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 SNX27Q96L92 541 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 DENND2DQ9H6A0 471 aaPredicted RBP17.13■□□□□ 0.33
PAX6-228ENST00000533333 ENAMQ9NRM1 1142 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 SMIM30A4D0T7 59 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 GRIA2P42262 883 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 CHRNA6Q15825 494 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 SLC36A4Q6YBV0 504 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 THAP3Q8WTV1 239 aaPredicted RBP17.13■□□□□ 0.33
PAX6-228ENST00000533333 KLHDC7BQ96G42 594 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 NLGN3Q9NZ94 848 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 CACNG4Q9UBN1 327 aa17.13■□□□□ 0.33
PAX6-228ENST00000533333 AGAP5A6NIR3 686 aa17.12■□□□□ 0.33
PAX6-228ENST00000533333 ANKRD28O15084 1053 aa17.12■□□□□ 0.33
PAX6-228ENST00000533333 SCO2O43819 266 aa17.12■□□□□ 0.33
PAX6-228ENST00000533333 SOX14O95416 240 aa17.12■□□□□ 0.33
PAX6-228ENST00000533333 CST3P01034 146 aaPredicted RBP17.12■□□□□ 0.33
PAX6-228ENST00000533333 MRPL3P09001 348 aaKnown RBP17.12■□□□□ 0.33
PAX6-228ENST00000533333 GKN3PP0CG01 181 aa17.12■□□□□ 0.33
PAX6-228ENST00000533333 GTF2F2P13984 249 aa17.12■□□□□ 0.33
PAX6-228ENST00000533333 ITGB5P18084 799 aa17.12■□□□□ 0.33
PAX6-228ENST00000533333 MFSD13AQ14CX5 517 aa17.12■□□□□ 0.33
PAX6-228ENST00000533333 HERC3Q15034 1050 aa17.12■□□□□ 0.33
PAX6-228ENST00000533333 SWT1Q5T5J6 900 aaKnown RBP17.12■□□□□ 0.33
PAX6-228ENST00000533333 DUS1LQ6P1R4 473 aaKnown RBP17.12■□□□□ 0.33
PAX6-228ENST00000533333 TCEANCQ8N8B7 351 aa17.12■□□□□ 0.33
PAX6-228ENST00000533333 KREMEN1Q96MU8 473 aa17.12■□□□□ 0.33
PAX6-228ENST00000533333 DCSTAMPQ9H295 470 aa17.12■□□□□ 0.33
PAX6-228ENST00000533333 PPP4R1LQ9P1A2 415 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms