RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 RTL4Q6ZR62 310 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 CTU1Q7Z7A3 348 aaKnown RBP6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 ANKRD52Q8NB46 1076 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 OR4C5Q8NGB2 326 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 NPRL2Q8WTW4 380 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 CCDC107Q8WV48 283 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 CANT1Q8WVQ1 401 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 TEPSINQ96N21 525 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 MRPL45Q9BRJ2 306 aaKnown RBP6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 PITHD1Q9GZP4 211 aaPredicted RBP6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 MUC13Q9H3R2 512 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 ABI3Q9P2A4 366 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 CHST10O43529 356 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 ADAM23O75077 832 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 RPL3P39023 403 aaKnown RBP6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 CXCR3P49682 368 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 CLCN5P51795 746 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 PDX1P52945 283 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 MANFP55145 182 aaKnown RBP6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 PON3Q15166 354 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 RAB30Q15771 203 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 XKR4Q5GH76 650 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 RNASEH2BQ5TBB1 312 aaKnown RBP6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 CHSY3Q70JA7 882 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 NRROSQ86YC3 692 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 CPNE9Q8IYJ1 553 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 PRSS58Q8IYP2 241 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 Q8N402 240 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 IFT27Q9BW83 186 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 NKX6-2Q9C056 277 aaPredicted RBP6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 TPT1P8Q9HAU6 139 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 SGK2Q9HBY8 427 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 CORO2BQ9UQ03 480 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 BTBD17A6NE02 478 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 SLC22A2O15244 555 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 PEX10O60683 326 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 LY86O95711 162 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 ADRB2P07550 413 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 CLEC2LP0C7M8 214 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 LINC00032P0C843 101 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 NT5EP21589 574 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 ITPKAP23677 461 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 ZNF143P52747 638 aaPredicted RBP6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 S100A10P60903 97 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 VLDLRP98155 873 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 SP2Q02086 613 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 LIPEQ05469 1076 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 LAPTM5Q13571 262 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 COL9A2Q14055 689 aaPredicted RBP6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 SELPLGQ14242 412 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 MAPKAPK3Q16644 382 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 COL13A1Q5TAT6 717 aaPredicted RBP6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 CYB5R2Q6BCY4 276 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 FOXR2Q6PJQ5 311 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 GPRIN3Q6ZVF9 776 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 ASRGL1Q7L266 308 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 VTCN1Q7Z7D3 282 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 FAM35AQ86V20 835 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 C17orf64Q86WR6 236 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 OR4L1Q8NH43 312 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 CORO2AQ92828 525 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 UFD1Q92890 307 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 PPCDCQ96CD2 204 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 LGALS12Q96DT0 336 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 COPS8Q99627 209 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 POLR2J2Q9GZM3 115 aaKnown RBP6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 BTBD1Q9H0C5 482 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 PRDM9Q9NQV7 894 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 ACSS2Q9NR19 701 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 B3GNT2Q9NY97 397 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 MAN2B2Q9Y2E5 1009 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 NPIPA2E9PIF3 369 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 NPIPA5E9PKD4 350 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 NPIPA3F8WFD2 350 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 PAPSS2O95340 614 aaPredicted RBP6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 TSPAN15O95858 294 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 ALDOBP05062 364 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 MMP3P08254 477 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 ALPPL2P10696 532 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 C6P13671 934 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 ITGB5P18084 799 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 IDH3GP51553 393 aaPredicted RBP6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 HNRNPA0Q13151 305 aaKnown RBP6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 SLC16A13Q7RTY0 426 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 ANKS1BQ7Z6G8 1248 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 TMPRSS11BQ86T26 416 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 NAA40Q86UY6 237 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 GTPBP8Q8N3Z3 284 aaPredicted RBP6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 BEND7Q8N7W2 519 aaPredicted RBP6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 OR13J1Q8NGT2 312 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 ITCHQ96J02 903 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 FCRL4Q96PJ5 515 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 LHPPQ9H008 270 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 LGALS13Q9UHV8 139 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 NPIPA1Q9UND3 350 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 SCN11AQ9UI33 1791 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 C13orf42A0A1B0GVH6 325 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 hCG_1807616A0A1W2PRN6 198 aa6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 GATCO43716 136 aaKnown RBP6.75□□□□□ -1.33
TGFBR3-210ENST00000533089 RETP07949 1114 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms