RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 FAR2Q96K12 515 aa10.69□□□□□ -0.7
TRAPPC4-211ENST00000533012 C10orf90Q96M02 699 aa10.69□□□□□ -0.7
TRAPPC4-211ENST00000533012 GBP5Q96PP8 586 aa10.69□□□□□ -0.7
TRAPPC4-211ENST00000533012 FRG2BQ96QU4 278 aa10.69□□□□□ -0.7
TRAPPC4-211ENST00000533012 MTERF1Q99551 399 aaKnown RBP10.69□□□□□ -0.7
TRAPPC4-211ENST00000533012 C17orf62Q9BQA9 187 aa10.69□□□□□ -0.7
TRAPPC4-211ENST00000533012 CENPKQ9BS16 269 aa10.69□□□□□ -0.7
TRAPPC4-211ENST00000533012 DPH1Q9BZG8 443 aa10.69□□□□□ -0.7
TRAPPC4-211ENST00000533012 SLC6A16Q9GZN6 736 aa10.69□□□□□ -0.7
TRAPPC4-211ENST00000533012 REXO4Q9GZR2 422 aaKnown RBP10.69□□□□□ -0.7
TRAPPC4-211ENST00000533012 ANKHQ9HCJ1 492 aa10.69□□□□□ -0.7
TRAPPC4-211ENST00000533012 ZNF304Q9HCX3 659 aa10.69□□□□□ -0.7
TRAPPC4-211ENST00000533012 ZNF225Q9UK10 706 aa10.69□□□□□ -0.7
TRAPPC4-211ENST00000533012 PCM1Q15154 2024 aa10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 SPTBN2O15020 2390 aa10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 H0YIG0 161 aa10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 TLX3O43711 291 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 MED26O95402 600 aa10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 FGF4P08620 206 aa10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 CD63P08962 238 aa10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 ALOX12P18054 663 aa10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 TCN2P20062 427 aa10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 BGNP21810 368 aa10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 CCR10P46092 362 aa10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 OR1D4P47884 311 aa10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 RAB8AP61006 207 aa10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 RPS13P62277 151 aaKnown RBP10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 ZNF33BQ06732 778 aa10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 HYAL2Q12891 473 aa10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 COL9A2Q14055 689 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 RCN2Q14257 317 aa10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 TGIF1Q15583 401 aa10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 NKAIN1Q4KMZ8 207 aa10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 TMEM35AQ53FP2 167 aa10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 DEPDC1Q5TB30 811 aa10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 MLIPQ5VWP3 458 aa10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 ADNP2Q6IQ32 1131 aa10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 FAM199XQ6PEV8 388 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 ZNF517Q6ZMY9 492 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 VN1R5Q7Z5H4 357 aa10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 CUZD1Q86UP6 607 aa10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 ARHGEF39Q8N4T4 335 aa10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 SRFBP1Q8NEF9 429 aaKnown RBP10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 ZCCHC10Q8TBK6 192 aa10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 UTP15Q8TED0 518 aaKnown RBP10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 KCNE4Q8WWG9 221 aa10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 SELENOMQ8WWX9 145 aa10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 MS4A6EQ96DS6 147 aa10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 MMABQ96EY8 250 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 F2RL3Q96RI0 385 aa10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 MS4A8Q9BY19 250 aa10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 SLC29A3Q9BZD2 475 aa10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 SHCBP1LQ9BZQ2 653 aa10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 CHST8Q9H2A9 424 aa10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 KLHL31Q9H511 634 aa10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 AKIRIN1Q9H9L7 192 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 DMRT3Q9NQL9 472 aa10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 NMRK1Q9NWW6 199 aa10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 IFT80Q9P2H3 777 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 GPN3Q9UHW5 284 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 MRPS2Q9Y399 296 aaKnown RBP10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 TIMM22Q9Y584 194 aa10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 MAU2Q9Y6X3 613 aa10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 CACNA1AO00555 2505 aa10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 ANKRD12Q6UB98 2062 aa10.68□□□□□ -0.7
TRAPPC4-211ENST00000533012 A0A088AWK7 358 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 A0A0A6YYC8 382 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 SRRM3A6NNA2 597 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 MAGEB17A8MXT2 336 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 TMEM114B3SHH9 223 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 C9J4A7 227 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 I3L1I5 382 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 MANBAO00462 879 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 KLK10O43240 276 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 ERI3O43414 337 aaKnown RBP10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 FOXS1O43638 330 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 SNUPNO95149 360 aaKnown RBP10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 NSA2O95478 260 aaKnown RBP10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 HSPA4LO95757 839 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 TBX6O95947 436 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 ONECUT2O95948 504 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 PDYNP01213 254 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 CHRNGP07510 517 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 ZNF888P0CJ79 500 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 ATXN8OSP0DMR3 200 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 SMIM10L1P0DMW3 83 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 UROSP10746 265 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 IL1RNP18510 177 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 ZNF10P21506 573 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 HNRNPH1P31943 449 aaKnown RBP10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 EIF2S3P41091 472 aaKnown RBP10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 STAT5AP42229 794 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 SLC1A6P48664 564 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 PLA2G16P53816 162 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 ABCE1P61221 599 aaKnown RBP10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 RPS15P62841 145 aaKnown RBP10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 CLN3Q13286 438 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 CUL3Q13618 768 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 ADPRMQ3LIE5 342 aa10.67□□□□□ -0.7
TRAPPC4-211ENST00000533012 DEFB134Q4QY38 66 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms