RNA–Protein interactions for RNA: ENST00000532446.5

PPP1CA-208, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 5

Gene PPP1CA, Length 1,465 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-208ENST00000532446 NDUFAB1O14561 156 aa17.12■□□□□ 0.33
PPP1CA-208ENST00000532446 ZSCAN9O15535 394 aaPredicted RBP17.12■□□□□ 0.33
PPP1CA-208ENST00000532446 SEMA3DO95025 777 aa17.12■□□□□ 0.33
PPP1CA-208ENST00000532446 EIF2S1P05198 315 aaKnown RBP17.12■□□□□ 0.33
PPP1CA-208ENST00000532446 FTH1P19P0C7X4 201 aa17.12■□□□□ 0.33
PPP1CA-208ENST00000532446 STXBP1P61764 594 aaKnown RBP17.12■□□□□ 0.33
PPP1CA-208ENST00000532446 C16orf72Q14CZ0 275 aa17.12■□□□□ 0.33
PPP1CA-208ENST00000532446 KIAA0040Q15053 153 aa17.12■□□□□ 0.33
PPP1CA-208ENST00000532446 AP5B1Q2VPB7 878 aa17.12■□□□□ 0.33
PPP1CA-208ENST00000532446 RFTN2Q52LD8 501 aaPredicted RBP17.12■□□□□ 0.33
PPP1CA-208ENST00000532446 TOR1AIP1Q5JTV8 583 aa17.12■□□□□ 0.33
PPP1CA-208ENST00000532446 TCTE1Q5JU00 501 aa17.12■□□□□ 0.33
PPP1CA-208ENST00000532446 GKAP1Q5VSY0 366 aaPredicted RBP17.12■□□□□ 0.33
PPP1CA-208ENST00000532446 NXNQ6DKJ4 435 aa17.12■□□□□ 0.33
PPP1CA-208ENST00000532446 OGFOD2Q6N063 350 aa17.12■□□□□ 0.33
PPP1CA-208ENST00000532446 ZFAND4Q86XD8 727 aa17.12■□□□□ 0.33
PPP1CA-208ENST00000532446 ARHGEF39Q8N4T4 335 aa17.12■□□□□ 0.33
PPP1CA-208ENST00000532446 CHTF18Q8WVB6 975 aa17.12■□□□□ 0.33
PPP1CA-208ENST00000532446 N4BP2L2Q92802 583 aaPredicted RBP17.12■□□□□ 0.33
PPP1CA-208ENST00000532446 MS4A6EQ96DS6 147 aa17.12■□□□□ 0.33
PPP1CA-208ENST00000532446 C11orf24Q96F05 449 aaPredicted RBP17.12■□□□□ 0.33
PPP1CA-208ENST00000532446 APIPQ96GX9 242 aa17.12■□□□□ 0.33
PPP1CA-208ENST00000532446 MRPL1Q9BYD6 325 aaKnown RBP17.12■□□□□ 0.33
PPP1CA-208ENST00000532446 NLNQ9BYT8 704 aa17.12■□□□□ 0.33
PPP1CA-208ENST00000532446 REXO4Q9GZR2 422 aaKnown RBP17.12■□□□□ 0.33
PPP1CA-208ENST00000532446 KLHL31Q9H511 634 aa17.12■□□□□ 0.33
PPP1CA-208ENST00000532446 FGF21Q9NSA1 209 aa17.12■□□□□ 0.33
PPP1CA-208ENST00000532446 NCOR2Q9Y618 2525 aa17.11■□□□□ 0.33
PPP1CA-208ENST00000532446 MED19A0JLT2 244 aaPredicted RBP17.11■□□□□ 0.33
PPP1CA-208ENST00000532446 TMEM150CB9EJG8 249 aa17.11■□□□□ 0.33
PPP1CA-208ENST00000532446 SAP18O00422 153 aaKnown RBP17.11■□□□□ 0.33
PPP1CA-208ENST00000532446 SEC22BO75396 215 aa17.11■□□□□ 0.33
PPP1CA-208ENST00000532446 LBPP18428 481 aa17.11■□□□□ 0.33
PPP1CA-208ENST00000532446 CSTF2P33240 577 aaKnown RBP eCLIP17.11■□□□□ 0.33
PPP1CA-208ENST00000532446 ACY1Q03154 408 aa17.11■□□□□ 0.33
PPP1CA-208ENST00000532446 SMU1Q2TAY7 513 aa17.11■□□□□ 0.33
PPP1CA-208ENST00000532446 GALNTL6Q49A17 601 aa17.11■□□□□ 0.33
PPP1CA-208ENST00000532446 UBE3DQ7Z6J8 389 aa17.11■□□□□ 0.33
PPP1CA-208ENST00000532446 METTL4Q8N3J2 472 aa17.11■□□□□ 0.33
PPP1CA-208ENST00000532446 AGBL5Q8NDL9 886 aa17.11■□□□□ 0.33
PPP1CA-208ENST00000532446 OR2L5Q8NG80 312 aa17.11■□□□□ 0.33
PPP1CA-208ENST00000532446 ZNF501Q96CX3 271 aaPredicted RBP17.11■□□□□ 0.33
PPP1CA-208ENST00000532446 RILPQ96NA2 401 aa17.11■□□□□ 0.33
PPP1CA-208ENST00000532446 CENPKQ9BS16 269 aa17.11■□□□□ 0.33
PPP1CA-208ENST00000532446 STARD5Q9NSY2 213 aa17.11■□□□□ 0.33
PPP1CA-208ENST00000532446 RUVBL1Q9Y265 456 aaKnown RBP17.11■□□□□ 0.33
PPP1CA-208ENST00000532446 ARL2BPQ9Y2Y0 163 aa17.11■□□□□ 0.33
PPP1CA-208ENST00000532446 SCN3AQ9NY46 2000 aa17.11■□□□□ 0.33
PPP1CA-208ENST00000532446 DCDC2BA2VCK2 349 aa17.1■□□□□ 0.33
PPP1CA-208ENST00000532446 FITM1A5D6W6 292 aa17.1■□□□□ 0.33
PPP1CA-208ENST00000532446 C4orf51C9J302 202 aa17.1■□□□□ 0.33
PPP1CA-208ENST00000532446 TMX2-CTNND1H3BSU7 103 aa17.1■□□□□ 0.33
PPP1CA-208ENST00000532446 PLPP1O14494 284 aa17.1■□□□□ 0.33
PPP1CA-208ENST00000532446 MT-CO3P00414 261 aa17.1■□□□□ 0.33
PPP1CA-208ENST00000532446 SMIM10L1P0DMW3 83 aa17.1■□□□□ 0.33
PPP1CA-208ENST00000532446 ARFIP1P53367 373 aa17.1■□□□□ 0.33
PPP1CA-208ENST00000532446 CLDN6P56747 220 aa17.1■□□□□ 0.33
PPP1CA-208ENST00000532446 ERVK-8P63133 956 aa17.1■□□□□ 0.33
PPP1CA-208ENST00000532446 SIM1P81133 766 aaPredicted RBP17.1■□□□□ 0.33
PPP1CA-208ENST00000532446 EMX2Q04743 252 aa17.1■□□□□ 0.33
PPP1CA-208ENST00000532446 ACSM2AQ08AH3 577 aa17.1■□□□□ 0.33
PPP1CA-208ENST00000532446 ISXQ2M1V0 245 aa17.1■□□□□ 0.33
PPP1CA-208ENST00000532446 SPIN4Q56A73 249 aa17.1■□□□□ 0.33
PPP1CA-208ENST00000532446 ACSM2BQ68CK6 577 aa17.1■□□□□ 0.33
PPP1CA-208ENST00000532446 TMEM214Q6NUQ4 689 aaKnown RBP17.1■□□□□ 0.33
PPP1CA-208ENST00000532446 C1orf52Q8N6N3 182 aaKnown RBP17.1■□□□□ 0.33
PPP1CA-208ENST00000532446 FNDC5Q8NAU1 212 aa17.1■□□□□ 0.33
PPP1CA-208ENST00000532446 OR1L3Q8NH93 324 aa17.1■□□□□ 0.33
PPP1CA-208ENST00000532446 UTP15Q8TED0 518 aaKnown RBP17.1■□□□□ 0.33
PPP1CA-208ENST00000532446 GAL3ST3Q96A11 431 aa17.1■□□□□ 0.33
PPP1CA-208ENST00000532446 RGMAQ96B86 450 aa17.1■□□□□ 0.33
PPP1CA-208ENST00000532446 SMIM10Q96HG1 83 aa17.1■□□□□ 0.33
PPP1CA-208ENST00000532446 FCRL1Q96LA6 429 aa17.1■□□□□ 0.33
PPP1CA-208ENST00000532446 ZNF717Q9BY31 904 aaPredicted RBP17.1■□□□□ 0.33
PPP1CA-208ENST00000532446 SPRTNQ9H040 489 aaPredicted RBP17.1■□□□□ 0.33
PPP1CA-208ENST00000532446 LHX9Q9NQ69 397 aa17.1■□□□□ 0.33
PPP1CA-208ENST00000532446 SIRT5Q9NXA8 310 aa17.1■□□□□ 0.33
PPP1CA-208ENST00000532446 AHSPQ9NZD4 102 aa17.1■□□□□ 0.33
PPP1CA-208ENST00000532446 URADA6NGE7 173 aa17.09■□□□□ 0.33
PPP1CA-208ENST00000532446 E9PBE3 544 aa17.09■□□□□ 0.33
PPP1CA-208ENST00000532446 ERI3O43414 337 aaKnown RBP17.09■□□□□ 0.33
PPP1CA-208ENST00000532446 KLHL41O60662 606 aa17.09■□□□□ 0.33
PPP1CA-208ENST00000532446 OR2B3O76000 313 aa17.09■□□□□ 0.33
PPP1CA-208ENST00000532446 NOVA1P51513 510 aaKnown RBP17.09■□□□□ 0.33
PPP1CA-208ENST00000532446 RAP1GDS1P52306 607 aa17.09■□□□□ 0.33
PPP1CA-208ENST00000532446 SNRPNP63162 240 aaKnown RBP17.09■□□□□ 0.33
PPP1CA-208ENST00000532446 RPL38P63173 70 aaKnown RBP17.09■□□□□ 0.33
PPP1CA-208ENST00000532446 HES3Q5TGS1 186 aa17.09■□□□□ 0.33
PPP1CA-208ENST00000532446 METTL21CQ5VZV1 264 aa17.09■□□□□ 0.33
PPP1CA-208ENST00000532446 TMEM198Q66K66 360 aa17.09■□□□□ 0.33
PPP1CA-208ENST00000532446 GALNT18Q6P9A2 607 aa17.09■□□□□ 0.33
PPP1CA-208ENST00000532446 ABHD17CQ6PCB6 329 aa17.09■□□□□ 0.33
PPP1CA-208ENST00000532446 COMMD6Q7Z4G1 85 aa17.09■□□□□ 0.33
PPP1CA-208ENST00000532446 SPATA19Q7Z5L4 167 aa17.09■□□□□ 0.33
PPP1CA-208ENST00000532446 BMPERQ8N8U9 685 aa17.09■□□□□ 0.33
PPP1CA-208ENST00000532446 ANKS4BQ8N8V4 417 aa17.09■□□□□ 0.33
PPP1CA-208ENST00000532446 SRFBP1Q8NEF9 429 aaKnown RBP17.09■□□□□ 0.33
PPP1CA-208ENST00000532446 KCNC2Q96PR1 638 aa17.09■□□□□ 0.33
PPP1CA-208ENST00000532446 OR6C1Q96RD1 312 aa17.09■□□□□ 0.33
PPP1CA-208ENST00000532446 STRADBQ9C0K7 418 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms