RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 ACAP2Q15057 778 aa21.71■■□□□ 1.07
CAPN1-222ENST00000532285 MINDY4Q4G0A6 757 aa21.71■■□□□ 1.07
CAPN1-222ENST00000532285 DEFB134Q4QY38 66 aa21.71■■□□□ 1.07
CAPN1-222ENST00000532285 AGAP7PQ5VUJ5 663 aa21.71■■□□□ 1.07
CAPN1-222ENST00000532285 JMJD6Q6NYC1 403 aaPredicted RBP21.71■■□□□ 1.07
CAPN1-222ENST00000532285 KLC3Q6P597 504 aa21.71■■□□□ 1.07
CAPN1-222ENST00000532285 LRRC70Q7Z2Q7 622 aa21.71■■□□□ 1.07
CAPN1-222ENST00000532285 RBMXL3Q8N7X1 1067 aaKnown RBP21.71■■□□□ 1.07
CAPN1-222ENST00000532285 CREB3L4Q8TEY5 395 aa21.71■■□□□ 1.07
CAPN1-222ENST00000532285 TM9SF4Q92544 642 aa21.71■■□□□ 1.07
CAPN1-222ENST00000532285 PTCD3Q96EY7 689 aaKnown RBP21.71■■□□□ 1.07
CAPN1-222ENST00000532285 THOC3Q96J01 351 aaKnown RBP21.71■■□□□ 1.07
CAPN1-222ENST00000532285 AGAP4Q96P64 663 aa21.71■■□□□ 1.07
CAPN1-222ENST00000532285 OR1F2PQ96R84 312 aa21.71■■□□□ 1.07
CAPN1-222ENST00000532285 CLK4Q9HAZ1 481 aaKnown RBP21.71■■□□□ 1.07
CAPN1-222ENST00000532285 ZNF860A6NHJ4 632 aa21.7■■□□□ 1.06
CAPN1-222ENST00000532285 KRT38O76015 456 aa21.7■■□□□ 1.06
CAPN1-222ENST00000532285 RHOXF2BP0C7M4 288 aa21.7■■□□□ 1.06
CAPN1-222ENST00000532285 C8orf89P0DMQ9 161 aa21.7■■□□□ 1.06
CAPN1-222ENST00000532285 MSH2P43246 934 aa21.7■■□□□ 1.06
CAPN1-222ENST00000532285 STXBP1P61764 594 aaKnown RBP21.7■■□□□ 1.06
CAPN1-222ENST00000532285 KCNC4Q03721 635 aa21.7■■□□□ 1.06
CAPN1-222ENST00000532285 EEF1A2Q05639 463 aaKnown RBP21.7■■□□□ 1.06
CAPN1-222ENST00000532285 Q0VFX4 171 aa21.7■■□□□ 1.06
CAPN1-222ENST00000532285 XKR6Q5GH73 641 aa21.7■■□□□ 1.06
CAPN1-222ENST00000532285 KBTBD2Q8IY47 623 aa21.7■■□□□ 1.06
CAPN1-222ENST00000532285 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.7■■□□□ 1.06
CAPN1-222ENST00000532285 UBTD2Q8WUN7 234 aa21.7■■□□□ 1.06
CAPN1-222ENST00000532285 PNPLA2Q96AD5 504 aa21.7■■□□□ 1.06
CAPN1-222ENST00000532285 WDR34Q96EX3 536 aa21.7■■□□□ 1.06
CAPN1-222ENST00000532285 RHOXF2Q9BQY4 288 aa21.7■■□□□ 1.06
CAPN1-222ENST00000532285 MFRPQ9BY79 579 aa21.7■■□□□ 1.06
CAPN1-222ENST00000532285 ZNF700Q9H0M5 742 aa21.7■■□□□ 1.06
CAPN1-222ENST00000532285 RIC8BQ9NVN3 520 aa21.7■■□□□ 1.06
CAPN1-222ENST00000532285 ZNF180Q9UJW8 692 aa21.7■■□□□ 1.06
CAPN1-222ENST00000532285 PRRC2CQ9Y520 2896 aaKnown RBP21.69■■□□□ 1.06
CAPN1-222ENST00000532285 ANKDD1BA6NHY2 528 aa21.69■■□□□ 1.06
CAPN1-222ENST00000532285 TTLL8A6PVC2 850 aa21.69■■□□□ 1.06
CAPN1-222ENST00000532285 POC1B-GALNT4F8VUJ3 575 aa21.69■■□□□ 1.06
CAPN1-222ENST00000532285 SMIM10L1P0DMW3 83 aa21.69■■□□□ 1.06
CAPN1-222ENST00000532285 CNTFP26441 200 aa21.69■■□□□ 1.06
CAPN1-222ENST00000532285 HNF4AP41235 474 aa21.69■■□□□ 1.06
CAPN1-222ENST00000532285 GLRBP48167 497 aa21.69■■□□□ 1.06
CAPN1-222ENST00000532285 EFNA3P52797 238 aa21.69■■□□□ 1.06
CAPN1-222ENST00000532285 LAPTM5Q13571 262 aa21.69■■□□□ 1.06
CAPN1-222ENST00000532285 DOC2AQ14183 400 aa21.69■■□□□ 1.06
CAPN1-222ENST00000532285 TOR1AIP1Q5JTV8 583 aa21.69■■□□□ 1.06
CAPN1-222ENST00000532285 TRMT10CQ7L0Y3 403 aaKnown RBP21.69■■□□□ 1.06
CAPN1-222ENST00000532285 SHISA5Q8N114 240 aa21.69■■□□□ 1.06
CAPN1-222ENST00000532285 ZADH2Q8N4Q0 377 aa21.69■■□□□ 1.06
CAPN1-222ENST00000532285 OR5T3Q8NGG3 340 aa21.69■■□□□ 1.06
CAPN1-222ENST00000532285 UHMK1Q8TAS1 419 aaKnown RBP21.69■■□□□ 1.06
CAPN1-222ENST00000532285 ISL2Q96A47 359 aa21.69■■□□□ 1.06
CAPN1-222ENST00000532285 PEX11GQ96HA9 241 aa21.69■■□□□ 1.06
CAPN1-222ENST00000532285 SMIM10Q96HG1 83 aa21.69■■□□□ 1.06
CAPN1-222ENST00000532285 EFCAB11Q9BUY7 163 aa21.69■■□□□ 1.06
CAPN1-222ENST00000532285 VPS11Q9H270 941 aa21.69■■□□□ 1.06
CAPN1-222ENST00000532285 KLHL31Q9H511 634 aa21.69■■□□□ 1.06
CAPN1-222ENST00000532285 OPTCQ9UBM4 332 aa21.69■■□□□ 1.06
CAPN1-222ENST00000532285 C19orf25Q9UFG5 118 aaPredicted RBP21.69■■□□□ 1.06
CAPN1-222ENST00000532285 UBR5O95071 2799 aaPredicted RBP21.68■■□□□ 1.06
CAPN1-222ENST00000532285 K7EPI3 171 aa21.68■■□□□ 1.06
CAPN1-222ENST00000532285 CHST10O43529 356 aa21.68■■□□□ 1.06
CAPN1-222ENST00000532285 PRAMEF4O60810 478 aa21.68■■□□□ 1.06
CAPN1-222ENST00000532285 CLEC3AO75596 197 aa21.68■■□□□ 1.06
CAPN1-222ENST00000532285 B3GALT4O96024 378 aa21.68■■□□□ 1.06
CAPN1-222ENST00000532285 MTHFD2P13995 350 aa21.68■■□□□ 1.06
CAPN1-222ENST00000532285 HPDP32754 393 aaPredicted RBP21.68■■□□□ 1.06
CAPN1-222ENST00000532285 CASP2P42575 452 aa21.68■■□□□ 1.06
CAPN1-222ENST00000532285 AGTR2P50052 363 aa21.68■■□□□ 1.06
CAPN1-222ENST00000532285 MLLT10P55197 1068 aa21.68■■□□□ 1.06
CAPN1-222ENST00000532285 RAB8AP61006 207 aa21.68■■□□□ 1.06
CAPN1-222ENST00000532285 FOXK1P85037 733 aa21.68■■□□□ 1.06
CAPN1-222ENST00000532285 IRF8Q02556 426 aa21.68■■□□□ 1.06
CAPN1-222ENST00000532285 PCOLCEQ15113 449 aa21.68■■□□□ 1.06
CAPN1-222ENST00000532285 TBCCQ15814 346 aa21.68■■□□□ 1.06
CAPN1-222ENST00000532285 HIST2H2ACQ16777 129 aaPredicted RBP21.68■■□□□ 1.06
CAPN1-222ENST00000532285 PAGE2BQ5JRK9 111 aa21.68■■□□□ 1.06
CAPN1-222ENST00000532285 PRAMEF9Q5VWM5 478 aa21.68■■□□□ 1.06
CAPN1-222ENST00000532285 SLC6A19Q695T7 634 aa21.68■■□□□ 1.06
CAPN1-222ENST00000532285 HIST2H2AA3Q6FI13 130 aa21.68■■□□□ 1.06
CAPN1-222ENST00000532285 DCAKDQ8WVC6 231 aa21.68■■□□□ 1.06
CAPN1-222ENST00000532285 TBC1D20Q96BZ9 403 aa21.68■■□□□ 1.06
CAPN1-222ENST00000532285 GPR78Q96P69 363 aa21.68■■□□□ 1.06
CAPN1-222ENST00000532285 TUBB6Q9BUF5 446 aa21.68■■□□□ 1.06
CAPN1-222ENST00000532285 SLAMF7Q9NQ25 335 aa21.68■■□□□ 1.06
CAPN1-222ENST00000532285 ASB1Q9Y576 335 aa21.68■■□□□ 1.06
CAPN1-222ENST00000532285 LRIT2A6NDA9 550 aa21.67■■□□□ 1.06
CAPN1-222ENST00000532285 SORBS2O94875 1100 aaKnown RBP21.67■■□□□ 1.06
CAPN1-222ENST00000532285 SERPINA7P05543 415 aa21.67■■□□□ 1.06
CAPN1-222ENST00000532285 FHP07954 510 aa21.67■■□□□ 1.06
CAPN1-222ENST00000532285 ABHD2P08910 425 aa21.67■■□□□ 1.06
CAPN1-222ENST00000532285 PRR35P0CG20 571 aa21.67■■□□□ 1.06
CAPN1-222ENST00000532285 ICAM2P13598 275 aa21.67■■□□□ 1.06
CAPN1-222ENST00000532285 EPORP19235 508 aa21.67■■□□□ 1.06
CAPN1-222ENST00000532285 MAGEA12P43365 314 aa21.67■■□□□ 1.06
CAPN1-222ENST00000532285 AP2B1P63010 937 aa21.67■■□□□ 1.06
CAPN1-222ENST00000532285 CHIT1Q13231 466 aa21.67■■□□□ 1.06
CAPN1-222ENST00000532285 IGFL2Q6UWQ7 119 aa21.67■■□□□ 1.06
CAPN1-222ENST00000532285 RIPOR1Q6ZS17 1223 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms