RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	DDIT4	Q9NX09	232 aa		5.51	□□□□□ -1.53
PUM1-222	ENST00000531867	C5AR2	Q9P296	337 aa		5.51	□□□□□ -1.53
PUM1-222	ENST00000531867	PTGFRN	Q9P2B2	879 aa		5.51	□□□□□ -1.53
PUM1-222	ENST00000531867	CTTNBP2NL	Q9P2B4	639 aa		5.51	□□□□□ -1.53
PUM1-222	ENST00000531867	LIMA1	Q9UHB6	759 aa	Known RBP	5.51	□□□□□ -1.53
PUM1-222	ENST00000531867	RRP15	Q9Y3B9	282 aa	Known RBP	5.51	□□□□□ -1.53
PUM1-222	ENST00000531867	MDC1	Q14676	2089 aa	Known RBP	5.51	□□□□□ -1.53
PUM1-222	ENST00000531867	MN1	Q10571	1320 aa	Predicted RBP	5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	ZNF469	Q96JG9	3925 aa	Predicted RBP	5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	FAM90A18P	A6NE21	464 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	FAM90A16P	A6NEW6	464 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	FAM90A9P	A6NNJ1	464 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867		A8MU76	341 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867		A8MV72	311 aa	Predicted RBP	5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	FAM90A5P	A8MXJ8	464 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867		E5RJQ4	531 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	E2F3	O00716	465 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	TOX3	O15405	576 aa	Predicted RBP	5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	ADAM20	O43506	726 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	STX10	O60499	249 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	SLC22A3	O75751	556 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	ADCY5	O95622	1261 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	C9	P02748	559 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	PCCB	P05166	539 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	STS	P08842	583 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	FAM90A15P	P0C7V4	464 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	FAM90A14P	P0C7W9	464 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	TMIGD3	P0DMS9	266 aa	Predicted RBP	5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	FGF5	P12034	268 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	CD1E	P15812	388 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	GM2A	P17900	193 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	NR2F2	P24468	414 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	AK4	P27144	223 aa	Predicted RBP	5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	PTPN4	P29074	926 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	OR1E1	P30953	314 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	MMP12	P39900	470 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	GP5	P40197	560 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	CAPZA2	P47755	286 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	CXCR3	P49682	368 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	CLK3	P49761	638 aa	Known RBP	5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	ELL	P55199	621 aa	Predicted RBP	5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	UCP3	P55916	312 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	WNT3	P56703	355 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	KRTAP10-9	P60411	292 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	GNA12	Q03113	381 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	ILF3	Q12906	894 aa	Known RBP eCLIP	5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	PTP4A2	Q12974	167 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	GPS1	Q13098	491 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	PEX6	Q13608	980 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	ATP1A4	Q13733	1029 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	ZNF235	Q14590	738 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	IL11RA	Q14626	422 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	HLX	Q14774	488 aa	Predicted RBP	5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	TBCC	Q15814	346 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	NTRK2	Q16620	822 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	UGP2	Q16851	508 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	ZNF630	Q2M218	657 aa	Predicted RBP	5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	SMTNL2	Q2TAL5	461 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	CBWD6	Q4V339	395 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	CBWD3	Q5JTY5	395 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	BRMS1L	Q5PSV4	323 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	CBWD5	Q5RIA9	395 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	ERMARD	Q5T6L9	678 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	FAM173B	Q6P4H8	233 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	SLC30A9	Q6PML9	568 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	SHC4	Q6S5L8	630 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	TMEM270	Q6UE05	265 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	IGFL3	Q6UXB1	125 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	ZNF517	Q6ZMY9	492 aa	Predicted RBP	5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	SYVN1	Q86TM6	617 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	DEFB106A	Q8N104	65 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	SFRP1	Q8N474	314 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	LINC00301	Q8NCQ3	95 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	OR10G6	Q8NH81	332 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	GABPB2	Q8TAK5	448 aa	Predicted RBP	5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	CT55	Q8WUE5	264 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	NT5C3B	Q969T7	300 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	PGAP3	Q96FM1	320 aa	Predicted RBP	5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	HMCES	Q96FZ2	354 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	THUMPD3	Q9BV44	507 aa	Known RBP	5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	FRMD8	Q9BZ67	464 aa	Predicted RBP	5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	TTYH3	Q9C0H2	523 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	ACTL8	Q9H568	366 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	CHST11	Q9NPF2	352 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	INTS10	Q9NVR2	710 aa	Known RBP	5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	MPP6	Q9NZW5	540 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	COPG2	Q9UBF2	871 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	UBA2	Q9UBT2	640 aa	Predicted RBP	5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	BAG5	Q9UL15	447 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	PADI1	Q9ULC6	663 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	CORO1C	Q9ULV4	474 aa	Predicted RBP	5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	CNTN6	Q9UQ52	1028 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	B3GNT3	Q9Y2A9	372 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	NTNG1	Q9Y2I2	539 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	MYO7B	Q6PIF6	2116 aa		5.5	□□□□□ -1.53
PUM1-222	ENST00000531867	PRRC2C	Q9Y520	2896 aa	Known RBP	5.49	□□□□□ -1.53
PUM1-222	ENST00000531867		A0A1B0GUH1	482 aa		5.49	□□□□□ -1.53
PUM1-222	ENST00000531867		A0A1W2PQ09	198 aa		5.49	□□□□□ -1.53
PUM1-222	ENST00000531867	CCDC151	A5D8V7	595 aa		5.49	□□□□□ -1.53
PUM1-222	ENST00000531867	OR2W5	A6NFC9	320 aa		5.49	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms