RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 SOX6P35712 828 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 HSD17B2P37059 387 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 MTIF2P46199 727 aaKnown RBP3.21□□□□□ -1.9
PTPRK-220ENST00000531466 HAND2P61296 217 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 MC1RQ01726 317 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 TAF10Q12962 218 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 CHAF1BQ13112 559 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 PDIA5Q14554 519 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 WDR43Q15061 677 aaKnown RBP eCLIP3.21□□□□□ -1.9
PTPRK-220ENST00000531466 PPA1Q15181 289 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 ZNF74Q16587 644 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 METTL11BQ5VVY1 283 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 C8orf74Q6P047 294 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 FAM47EQ6ZV65 393 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 G2E3Q7L622 706 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 CHMP1BQ7LBR1 199 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 CCDC83Q8IWF9 413 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 NPEPL1Q8NDH3 523 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 OR8K3Q8NH51 312 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 GDAP1Q8TB36 358 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 SHC3Q92529 594 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 PGAM5Q96HS1 289 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 CITED2Q99967 270 aaPredicted RBP3.21□□□□□ -1.9
PTPRK-220ENST00000531466 BTBD10Q9BSF8 475 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 TBCDQ9BTW9 1192 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 SPZ1Q9BXG8 430 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 ADNPQ9H2P0 1102 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 DPAGT1Q9H3H5 408 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 C8orf33Q9H7E9 229 aaPredicted RBP3.21□□□□□ -1.9
PTPRK-220ENST00000531466 CHMP1AQ9HD42 196 aaPredicted RBP3.21□□□□□ -1.9
PTPRK-220ENST00000531466 AATFQ9NY61 560 aaKnown RBP eCLIP3.21□□□□□ -1.9
PTPRK-220ENST00000531466 TBC1D7Q9P0N9 293 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 COX16Q9P0S2 106 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 VPS18Q9P253 973 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 PTBP2Q9UKA9 531 aaKnown RBP3.21□□□□□ -1.9
PTPRK-220ENST00000531466 CORO1CQ9ULV4 474 aaPredicted RBP3.21□□□□□ -1.9
PTPRK-220ENST00000531466 TMEM5Q9Y2B1 443 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 SESN1Q9Y6P5 492 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 AP1M2Q9Y6Q5 423 aa3.21□□□□□ -1.9
PTPRK-220ENST00000531466 V9GYY5 206 aaPredicted RBP3.21□□□□□ -1.9
PTPRK-220ENST00000531466 FRMD3A2A2Y4 597 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 ENO4A6NNW6 628 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 GOLGA6L19H0YKK7 550 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 DDX39AO00148 427 aaKnown RBP3.2□□□□□ -1.9
PTPRK-220ENST00000531466 HAT1O14929 419 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 RIPK2O43353 540 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 AHCYL1O43865 530 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 TRIM16O95361 564 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 WDPCPO95876 746 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 NR2F1P10589 423 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 CYP11B2P19099 503 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 PPARGP37231 505 aaPredicted RBP3.2□□□□□ -1.9
PTPRK-220ENST00000531466 SLC26A5P58743 744 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 BASP1P80723 227 aaKnown RBP3.2□□□□□ -1.9
PTPRK-220ENST00000531466 GABPB1Q06547 395 aaPredicted RBP3.2□□□□□ -1.9
PTPRK-220ENST00000531466 TRAP1Q12931 704 aaKnown RBP3.2□□□□□ -1.9
PTPRK-220ENST00000531466 BFSP1Q12934 665 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 CFAP221Q4G0U5 840 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 HSP90AA5PQ58FG0 334 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 HHATQ5VTY9 493 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 JADE1Q6IE81 842 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 KLHL35Q6PF15 583 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 IYDQ6PHW0 289 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 IGFL3Q6UXB1 125 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 RGS9BPQ6ZS82 235 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 SZRD1Q7Z422 152 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 BNIPLQ7Z465 357 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 HOOK3Q86VS8 718 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 WDTC1Q8N5D0 677 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 RTL3Q8N8U3 475 aaKnown RBP3.2□□□□□ -1.9
PTPRK-220ENST00000531466 XXYLT1Q8NBI6 393 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 IPMKQ8NFU5 416 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 ATP6V0A1Q93050 837 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 TUBGCP3Q96CW5 907 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 CMTM3Q96MX0 182 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 RUNDC3BQ96NL0 473 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 CATSPER2Q96P56 530 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 SH3GL3Q99963 347 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 MGME1Q9BQP7 344 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 OVOL2Q9BRP0 275 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 LMF2Q9BU23 707 aaKnown RBP3.2□□□□□ -1.9
PTPRK-220ENST00000531466 FNDC11Q9BVV2 318 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 FAM49AQ9H0Q0 323 aaPredicted RBP3.2□□□□□ -1.9
PTPRK-220ENST00000531466 TRPV6Q9H1D0 765 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 PARLQ9H300 379 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 SH2D4AQ9H788 454 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 FANCEQ9HB96 536 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 FAM207AQ9NSI2 230 aaPredicted RBP3.2□□□□□ -1.9
PTPRK-220ENST00000531466 DDX18Q9NVP1 670 aaKnown RBP3.2□□□□□ -1.9
PTPRK-220ENST00000531466 SPHK1Q9NYA1 384 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 B3GAT1Q9P2W7 334 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 MTRF1LQ9UGC7 380 aaKnown RBP3.2□□□□□ -1.9
PTPRK-220ENST00000531466 PRELID1Q9Y255 219 aa3.2□□□□□ -1.9
PTPRK-220ENST00000531466 DHX29Q7Z478 1369 aaKnown RBP3.2□□□□□ -1.9
PTPRK-220ENST00000531466 MAP3K19Q56UN5 1328 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 TTC21BQ7Z4L5 1316 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 hCG_1807616A0A1W2PRN6 198 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 MAPK13O15264 365 aa3.19□□□□□ -1.9
PTPRK-220ENST00000531466 POLR2DO15514 142 aaKnown RBP3.19□□□□□ -1.9
PTPRK-220ENST00000531466 SULT1B1O43704 296 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms