RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 HERC3Q15034 1050 aa17.29■□□□□ 0.36
SSSCA1-206ENST00000531405 DEFB134Q4QY38 66 aa17.29■□□□□ 0.36
SSSCA1-206ENST00000531405 RNFT1Q5M7Z0 435 aa17.29■□□□□ 0.36
SSSCA1-206ENST00000531405 SLC25A25Q6KCM7 469 aa17.29■□□□□ 0.36
SSSCA1-206ENST00000531405 LRRC8EQ6NSJ5 796 aa17.29■□□□□ 0.36
SSSCA1-206ENST00000531405 UGT3A1Q6NUS8 523 aa17.29■□□□□ 0.36
SSSCA1-206ENST00000531405 ZNF662Q6ZS27 426 aa17.29■□□□□ 0.36
SSSCA1-206ENST00000531405 RPS19BP1Q86WX3 136 aaKnown RBP17.29■□□□□ 0.36
SSSCA1-206ENST00000531405 CHERPQ8IWX8 916 aaKnown RBP17.29■□□□□ 0.36
SSSCA1-206ENST00000531405 MYO1HQ8N1T3 1032 aa17.29■□□□□ 0.36
SSSCA1-206ENST00000531405 CPSF7Q8N684 471 aaKnown RBP17.29■□□□□ 0.36
SSSCA1-206ENST00000531405 C2CD4AQ8NCU7 369 aaPredicted RBP17.29■□□□□ 0.36
SSSCA1-206ENST00000531405 ELP5Q8TE02 316 aa17.29■□□□□ 0.36
SSSCA1-206ENST00000531405 AGAP11Q8TF27 550 aa17.29■□□□□ 0.36
SSSCA1-206ENST00000531405 TBC1D20Q96BZ9 403 aa17.29■□□□□ 0.36
SSSCA1-206ENST00000531405 LINGO1Q96FE5 620 aa17.29■□□□□ 0.36
SSSCA1-206ENST00000531405 OR4K3Q96R72 315 aa17.29■□□□□ 0.36
SSSCA1-206ENST00000531405 TRIM51Q9BSJ1 452 aa17.29■□□□□ 0.36
SSSCA1-206ENST00000531405 SPNS1Q9H2V7 528 aa17.29■□□□□ 0.36
SSSCA1-206ENST00000531405 BANF1O75531 89 aa17.28■□□□□ 0.36
SSSCA1-206ENST00000531405 SLC25A12O75746 678 aa17.28■□□□□ 0.36
SSSCA1-206ENST00000531405 ZNF888P0CJ79 500 aaPredicted RBP17.28■□□□□ 0.36
SSSCA1-206ENST00000531405 IL10P22301 178 aa17.28■□□□□ 0.36
SSSCA1-206ENST00000531405 GABRB3P28472 473 aa17.28■□□□□ 0.36
SSSCA1-206ENST00000531405 CCR8P51685 355 aa17.28■□□□□ 0.36
SSSCA1-206ENST00000531405 KRTAP10-9P60411 292 aa17.28■□□□□ 0.36
SSSCA1-206ENST00000531405 CRYMQ14894 314 aa17.28■□□□□ 0.36
SSSCA1-206ENST00000531405 CCDC137Q6PK04 289 aaKnown RBP17.28■□□□□ 0.36
SSSCA1-206ENST00000531405 CYP4X1Q8N118 509 aa17.28■□□□□ 0.36
SSSCA1-206ENST00000531405 HORMAD2Q8N7B1 307 aa17.28■□□□□ 0.36
SSSCA1-206ENST00000531405 NAT8LQ8N9F0 302 aa17.28■□□□□ 0.36
SSSCA1-206ENST00000531405 FAM98AQ8NCA5 519 aaKnown RBP17.28■□□□□ 0.36
SSSCA1-206ENST00000531405 ABHD11Q8NFV4 315 aa17.28■□□□□ 0.36
SSSCA1-206ENST00000531405 FAM129AQ9BZQ8 928 aa17.28■□□□□ 0.36
SSSCA1-206ENST00000531405 TAS2R13Q9NYV9 303 aa17.28■□□□□ 0.36
SSSCA1-206ENST00000531405 SLC17A6Q9P2U8 582 aa17.28■□□□□ 0.36
SSSCA1-206ENST00000531405 PHF3Q92576 2039 aaKnown RBP17.28■□□□□ 0.36
SSSCA1-206ENST00000531405 CTAGE15A4D2H0 777 aa17.27■□□□□ 0.36
SSSCA1-206ENST00000531405 SLC16A5O15375 505 aa17.27■□□□□ 0.36
SSSCA1-206ENST00000531405 NME2P1O60361 137 aa17.27■□□□□ 0.36
SSSCA1-206ENST00000531405 ZNF24P17028 368 aa17.27■□□□□ 0.36
SSSCA1-206ENST00000531405 ALOX12P18054 663 aa17.27■□□□□ 0.36
SSSCA1-206ENST00000531405 NME2P22392 152 aa17.27■□□□□ 0.36
SSSCA1-206ENST00000531405 BTG2P78543 158 aa17.27■□□□□ 0.36
SSSCA1-206ENST00000531405 CATSPEREQ5SY80 951 aa17.27■□□□□ 0.36
SSSCA1-206ENST00000531405 FGD2Q7Z6J4 655 aa17.27■□□□□ 0.36
SSSCA1-206ENST00000531405 CTAGE6Q86UF2 777 aa17.27■□□□□ 0.36
SSSCA1-206ENST00000531405 ZNF227Q86WZ6 799 aa17.27■□□□□ 0.36
SSSCA1-206ENST00000531405 DOLPP1Q86YN1 238 aa17.27■□□□□ 0.36
SSSCA1-206ENST00000531405 LGI4Q8N135 537 aa17.27■□□□□ 0.36
SSSCA1-206ENST00000531405 GHDCQ8N2G8 530 aa17.27■□□□□ 0.36
SSSCA1-206ENST00000531405 OR4K1Q8NGD4 311 aa17.27■□□□□ 0.36
SSSCA1-206ENST00000531405 SNF8Q96H20 258 aa17.27■□□□□ 0.36
SSSCA1-206ENST00000531405 PTCHD1Q96NR3 888 aa17.27■□□□□ 0.36
SSSCA1-206ENST00000531405 HAUS8Q9BT25 410 aa17.27■□□□□ 0.36
SSSCA1-206ENST00000531405 GPAMQ9HCL2 828 aa17.27■□□□□ 0.36
SSSCA1-206ENST00000531405 ARL15Q9NXU5 204 aa17.27■□□□□ 0.36
SSSCA1-206ENST00000531405 TRBC2A0A5B9 178 aa17.26■□□□□ 0.35
SSSCA1-206ENST00000531405 TSPAN12O95859 305 aa17.26■□□□□ 0.35
SSSCA1-206ENST00000531405 HIST1H2AGP0C0S8 130 aaPredicted RBP17.26■□□□□ 0.35
SSSCA1-206ENST00000531405 HIST1H2ADP20671 130 aa17.26■□□□□ 0.35
SSSCA1-206ENST00000531405 MAOAP21397 527 aa17.26■□□□□ 0.35
SSSCA1-206ENST00000531405 JAK1P23458 1154 aa17.26■□□□□ 0.35
SSSCA1-206ENST00000531405 PTGER1P34995 402 aa17.26■□□□□ 0.35
SSSCA1-206ENST00000531405 HNF4AP41235 474 aa17.26■□□□□ 0.35
SSSCA1-206ENST00000531405 ITGA8P53708 1063 aa17.26■□□□□ 0.35
SSSCA1-206ENST00000531405 PWP1Q13610 501 aa17.26■□□□□ 0.35
SSSCA1-206ENST00000531405 DUPD1Q68J44 220 aa17.26■□□□□ 0.35
SSSCA1-206ENST00000531405 RASGEF1CQ8N431 466 aa17.26■□□□□ 0.35
SSSCA1-206ENST00000531405 OR56A3Q8NH54 315 aa17.26■□□□□ 0.35
SSSCA1-206ENST00000531405 HIST1H2AHQ96KK5 128 aa17.26■□□□□ 0.35
SSSCA1-206ENST00000531405 TSNARE1Q96NA8 513 aa17.26■□□□□ 0.35
SSSCA1-206ENST00000531405 HIST1H2AJQ99878 128 aa17.26■□□□□ 0.35
SSSCA1-206ENST00000531405 H2AFJQ9BTM1 129 aa17.26■□□□□ 0.35
SSSCA1-206ENST00000531405 SARGQ9BW04 601 aa17.26■□□□□ 0.35
SSSCA1-206ENST00000531405 ASB1Q9Y576 335 aa17.26■□□□□ 0.35
SSSCA1-206ENST00000531405 ZFHX3Q15911 3703 aa17.26■□□□□ 0.35
SSSCA1-206ENST00000531405 NF1P21359 2839 aa17.25■□□□□ 0.35
SSSCA1-206ENST00000531405 MAP1AP78559 2803 aaPredicted RBP17.25■□□□□ 0.35
SSSCA1-206ENST00000531405 SAGE2PA6NJ88 616 aa17.25■□□□□ 0.35
SSSCA1-206ENST00000531405 A8MUA0 341 aa17.25■□□□□ 0.35
SSSCA1-206ENST00000531405 ADAM10O14672 748 aa17.25■□□□□ 0.35
SSSCA1-206ENST00000531405 GUCA1CO95843 209 aa17.25■□□□□ 0.35
SSSCA1-206ENST00000531405 AHSGP02765 367 aa17.25■□□□□ 0.35
SSSCA1-206ENST00000531405 PGAM1P18669 254 aa17.25■□□□□ 0.35
SSSCA1-206ENST00000531405 SSTR2P30874 369 aa17.25■□□□□ 0.35
SSSCA1-206ENST00000531405 RFC3P40938 356 aa17.25■□□□□ 0.35
SSSCA1-206ENST00000531405 CYB561P49447 251 aa17.25■□□□□ 0.35
SSSCA1-206ENST00000531405 MLF1P58340 268 aa17.25■□□□□ 0.35
SSSCA1-206ENST00000531405 RAB8AP61006 207 aa17.25■□□□□ 0.35
SSSCA1-206ENST00000531405 CYP1B1Q16678 543 aa17.25■□□□□ 0.35
SSSCA1-206ENST00000531405 CEP97Q8IW35 865 aa17.25■□□□□ 0.35
SSSCA1-206ENST00000531405 NT5CQ8TCD5 201 aa17.25■□□□□ 0.35
SSSCA1-206ENST00000531405 UTP15Q8TED0 518 aaKnown RBP17.25■□□□□ 0.35
SSSCA1-206ENST00000531405 NEIL2Q969S2 332 aa17.25■□□□□ 0.35
SSSCA1-206ENST00000531405 C4orf51C9J302 202 aa17.24■□□□□ 0.35
SSSCA1-206ENST00000531405 PRMT3O60678 531 aa17.24■□□□□ 0.35
SSSCA1-206ENST00000531405 SCTRP47872 440 aa17.24■□□□□ 0.35
SSSCA1-206ENST00000531405 RGS1Q08116 209 aa17.24■□□□□ 0.35
SSSCA1-206ENST00000531405 MSS51Q4VC12 460 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms