RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 CCNG2Q16589 344 aa19.69■□□□□ 0.74
CHKA-206ENST00000531341 ZNF470Q6ECI4 717 aa19.69■□□□□ 0.74
CHKA-206ENST00000531341 MDGA2Q7Z553 956 aa19.69■□□□□ 0.74
CHKA-206ENST00000531341 TMEM200AQ86VY9 491 aa19.69■□□□□ 0.74
CHKA-206ENST00000531341 EID3Q8N140 333 aa19.69■□□□□ 0.74
CHKA-206ENST00000531341 MFSD9Q8NBP5 474 aa19.69■□□□□ 0.74
CHKA-206ENST00000531341 NFAM1Q8NET5 270 aaPredicted RBP19.69■□□□□ 0.74
CHKA-206ENST00000531341 ALKBH8Q96BT7 664 aaKnown RBP19.69■□□□□ 0.74
CHKA-206ENST00000531341 TBC1D20Q96BZ9 403 aa19.69■□□□□ 0.74
CHKA-206ENST00000531341 KLHL42Q9P2K6 505 aa19.69■□□□□ 0.74
CHKA-206ENST00000531341 CTAGE9A4FU28 777 aa19.68■□□□□ 0.74
CHKA-206ENST00000531341 A8MUA0 341 aa19.68■□□□□ 0.74
CHKA-206ENST00000531341 AP3B1O00203 1094 aa19.68■□□□□ 0.74
CHKA-206ENST00000531341 PEX1O43933 1283 aa19.68■□□□□ 0.74
CHKA-206ENST00000531341 GALR3O60755 368 aaPredicted RBP19.68■□□□□ 0.74
CHKA-206ENST00000531341 IL10P22301 178 aa19.68■□□□□ 0.74
CHKA-206ENST00000531341 CHRNB4P30926 498 aa19.68■□□□□ 0.74
CHKA-206ENST00000531341 GPR85P60893 370 aa19.68■□□□□ 0.74
CHKA-206ENST00000531341 DEFB134Q4QY38 66 aa19.68■□□□□ 0.74
CHKA-206ENST00000531341 C16orf52Q8NHV5 167 aa19.68■□□□□ 0.74
CHKA-206ENST00000531341 ASB5Q8WWX0 329 aa19.68■□□□□ 0.74
CHKA-206ENST00000531341 KCNJ9Q92806 393 aa19.68■□□□□ 0.74
CHKA-206ENST00000531341 TMEM125Q96AQ2 219 aa19.68■□□□□ 0.74
CHKA-206ENST00000531341 PTCHD1Q96NR3 888 aa19.68■□□□□ 0.74
CHKA-206ENST00000531341 ZNF559Q9BR84 538 aa19.68■□□□□ 0.74
CHKA-206ENST00000531341 PDE10AQ9Y233 779 aa19.68■□□□□ 0.74
CHKA-206ENST00000531341 CTAGE15A4D2H0 777 aa19.67■□□□□ 0.74
CHKA-206ENST00000531341 CDK2AP1O14519 115 aa19.67■□□□□ 0.74
CHKA-206ENST00000531341 ENO3P13929 434 aaPredicted RBP19.67■□□□□ 0.74
CHKA-206ENST00000531341 NPPBP16860 134 aa19.67■□□□□ 0.74
CHKA-206ENST00000531341 TPSB2P20231 275 aa19.67■□□□□ 0.74
CHKA-206ENST00000531341 MAOAP21397 527 aa19.67■□□□□ 0.74
CHKA-206ENST00000531341 ZNF75DP51815 510 aa19.67■□□□□ 0.74
CHKA-206ENST00000531341 PMPCAQ10713 525 aa19.67■□□□□ 0.74
CHKA-206ENST00000531341 NAE1Q13564 534 aa19.67■□□□□ 0.74
CHKA-206ENST00000531341 TPSAB1Q15661 275 aa19.67■□□□□ 0.74
CHKA-206ENST00000531341 AGTRAPQ6RW13 159 aa19.67■□□□□ 0.74
CHKA-206ENST00000531341 CTAGE6Q86UF2 777 aa19.67■□□□□ 0.74
CHKA-206ENST00000531341 C17orf64Q86WR6 236 aa19.67■□□□□ 0.74
CHKA-206ENST00000531341 POGLUT1Q8NBL1 392 aa19.67■□□□□ 0.74
CHKA-206ENST00000531341 NECTIN3Q9NQS3 549 aa19.67■□□□□ 0.74
CHKA-206ENST00000531341 SAGE2PA6NJ88 616 aa19.66■□□□□ 0.74
CHKA-206ENST00000531341 NDUFS4O43181 175 aa19.66■□□□□ 0.74
CHKA-206ENST00000531341 HOXD4P09016 255 aaPredicted RBP19.66■□□□□ 0.74
CHKA-206ENST00000531341 SLC35G6P0C7Q6 338 aa19.66■□□□□ 0.74
CHKA-206ENST00000531341 NUP107P57740 925 aa19.66■□□□□ 0.74
CHKA-206ENST00000531341 TIAL1Q01085 375 aaKnown RBP eCLIP19.66■□□□□ 0.74
CHKA-206ENST00000531341 DHX34Q14147 1143 aaKnown RBP19.66■□□□□ 0.74
CHKA-206ENST00000531341 HERC3Q15034 1050 aa19.66■□□□□ 0.74
CHKA-206ENST00000531341 TRIP13Q15645 432 aaPredicted RBP19.66■□□□□ 0.74
CHKA-206ENST00000531341 ANKRD22Q5VYY1 191 aa19.66■□□□□ 0.74
CHKA-206ENST00000531341 TMEM211Q6ICI0 200 aa19.66■□□□□ 0.74
CHKA-206ENST00000531341 CASC4Q6P4E1 433 aa19.66■□□□□ 0.74
CHKA-206ENST00000531341 GSTA5Q7RTV2 222 aa19.66■□□□□ 0.74
CHKA-206ENST00000531341 CAND1Q86VP6 1230 aaKnown RBP19.66■□□□□ 0.74
CHKA-206ENST00000531341 MMP21Q8N119 569 aa19.66■□□□□ 0.74
CHKA-206ENST00000531341 ARMC10Q8N2F6 343 aa19.66■□□□□ 0.74
CHKA-206ENST00000531341 EEF1AKMT1Q8WVE0 214 aa19.66■□□□□ 0.74
CHKA-206ENST00000531341 RND1Q92730 232 aa19.66■□□□□ 0.74
CHKA-206ENST00000531341 SEC16BQ96JE7 1060 aa19.66■□□□□ 0.74
CHKA-206ENST00000531341 BAG1Q99933 345 aaPredicted RBP19.66■□□□□ 0.74
CHKA-206ENST00000531341 SGPP1Q9BX95 441 aa19.66■□□□□ 0.74
CHKA-206ENST00000531341 DEFB127Q9H1M4 99 aa19.66■□□□□ 0.74
CHKA-206ENST00000531341 SPNS1Q9H2V7 528 aa19.66■□□□□ 0.74
CHKA-206ENST00000531341 KCNJ16Q9NPI9 418 aa19.66■□□□□ 0.74
CHKA-206ENST00000531341 PLSCR2Q9NRY7 297 aa19.66■□□□□ 0.74
CHKA-206ENST00000531341 VPS9D1Q9Y2B5 631 aa19.66■□□□□ 0.74
CHKA-206ENST00000531341 KLF13Q9Y2Y9 288 aaPredicted RBP19.66■□□□□ 0.74
CHKA-206ENST00000531341 ZCWPW2A0A1B0GU75 182 aa19.65■□□□□ 0.74
CHKA-206ENST00000531341 PINLYPA6NC86 204 aa19.65■□□□□ 0.74
CHKA-206ENST00000531341 FOXO6A8MYZ6 492 aa19.65■□□□□ 0.74
CHKA-206ENST00000531341 KLRC4-KLRK1H3BQV0 150 aa19.65■□□□□ 0.74
CHKA-206ENST00000531341 OR1F1O43749 312 aa19.65■□□□□ 0.74
CHKA-206ENST00000531341 PRMT3O60678 531 aa19.65■□□□□ 0.74
CHKA-206ENST00000531341 HAUS5O94927 633 aa19.65■□□□□ 0.74
CHKA-206ENST00000531341 ZNF888P0CJ79 500 aaPredicted RBP19.65■□□□□ 0.74
CHKA-206ENST00000531341 ALOX12P18054 663 aa19.65■□□□□ 0.74
CHKA-206ENST00000531341 SLC1A2P43004 574 aa19.65■□□□□ 0.74
CHKA-206ENST00000531341 HYAL2Q12891 473 aa19.65■□□□□ 0.74
CHKA-206ENST00000531341 SKOR2Q2VWA4 1001 aaPredicted RBP19.65■□□□□ 0.74
CHKA-206ENST00000531341 DRICH1Q6PGQ1 229 aaPredicted RBP19.65■□□□□ 0.74
CHKA-206ENST00000531341 C4orf22Q6V702 233 aa19.65■□□□□ 0.74
CHKA-206ENST00000531341 ZFP62Q8NB50 900 aaPredicted RBP19.65■□□□□ 0.74
CHKA-206ENST00000531341 APCDD1LQ8NCL9 501 aa19.65■□□□□ 0.74
CHKA-206ENST00000531341 ZNF669Q96BR6 464 aaPredicted RBP19.65■□□□□ 0.74
CHKA-206ENST00000531341 DEFB126Q9BYW3 111 aa19.65■□□□□ 0.74
CHKA-206ENST00000531341 TSGA10Q9BZW7 698 aa19.65■□□□□ 0.74
CHKA-206ENST00000531341 PCBD2Q9H0N5 130 aa19.65■□□□□ 0.74
CHKA-206ENST00000531341 TP63Q9H3D4 680 aaPredicted RBP19.65■□□□□ 0.74
CHKA-206ENST00000531341 LIME1Q9H400 295 aa19.65■□□□□ 0.74
CHKA-206ENST00000531341 DEPPQ9NTK1 212 aa19.65■□□□□ 0.74
CHKA-206ENST00000531341 ZNF223Q9UK11 482 aaPredicted RBP19.65■□□□□ 0.74
CHKA-206ENST00000531341 PRRC2AP48634 2157 aaKnown RBP19.65■□□□□ 0.74
CHKA-206ENST00000531341 HRNRQ86YZ3 2850 aaPredicted RBP19.64■□□□□ 0.73
CHKA-206ENST00000531341 TCRBV16S1A1N1A0A5B0 115 aa19.64■□□□□ 0.73
CHKA-206ENST00000531341 CEP104O60308 925 aa19.64■□□□□ 0.73
CHKA-206ENST00000531341 SERPIND1P05546 499 aa19.64■□□□□ 0.73
CHKA-206ENST00000531341 PAMP19021 973 aa19.64■□□□□ 0.73
CHKA-206ENST00000531341 CDK16Q00536 496 aa19.64■□□□□ 0.73
CHKA-206ENST00000531341 THOC5Q13769 683 aaKnown RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms