RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 CDKN2DP55273 166 aa14.85□□□□□ -0.03
CHMP4A-204ENST00000530996 PPP1R7Q15435 360 aa14.85□□□□□ -0.03
CHMP4A-204ENST00000530996 NIPAL1Q6NVV3 410 aa14.85□□□□□ -0.03
CHMP4A-204ENST00000530996 CEP97Q8IW35 865 aa14.85□□□□□ -0.03
CHMP4A-204ENST00000530996 PPIL6Q8IXY8 311 aa14.85□□□□□ -0.03
CHMP4A-204ENST00000530996 LGI4Q8N135 537 aa14.85□□□□□ -0.03
CHMP4A-204ENST00000530996 EID3Q8N140 333 aa14.85□□□□□ -0.03
CHMP4A-204ENST00000530996 AGGF1Q8N302 714 aaeCLIP14.85□□□□□ -0.032e-8■□□□□ 9
CHMP4A-204ENST00000530996 C2CD4AQ8NCU7 369 aaPredicted RBP14.85□□□□□ -0.03
CHMP4A-204ENST00000530996 CHTF18Q8WVB6 975 aa14.85□□□□□ -0.03
CHMP4A-204ENST00000530996 MS4A14Q96JA4 679 aa14.85□□□□□ -0.03
CHMP4A-204ENST00000530996 PTCHD1Q96NR3 888 aa14.85□□□□□ -0.03
CHMP4A-204ENST00000530996 NAP1L3Q99457 506 aaPredicted RBP14.85□□□□□ -0.03
CHMP4A-204ENST00000530996 ASIC3Q9UHC3 531 aa14.85□□□□□ -0.03
CHMP4A-204ENST00000530996 FBN2P35556 2912 aa14.85□□□□□ -0.03
CHMP4A-204ENST00000530996 TRBC2A0A5B9 178 aa14.84□□□□□ -0.03
CHMP4A-204ENST00000530996 FCHO1O14526 889 aa14.84□□□□□ -0.03
CHMP4A-204ENST00000530996 PRRG2O14669 202 aa14.84□□□□□ -0.03
CHMP4A-204ENST00000530996 CHST10O43529 356 aa14.84□□□□□ -0.03
CHMP4A-204ENST00000530996 ASNA1O43681 348 aa14.84□□□□□ -0.03
CHMP4A-204ENST00000530996 NME2P1O60361 137 aa14.84□□□□□ -0.03
CHMP4A-204ENST00000530996 BANF1O75531 89 aa14.84□□□□□ -0.03
CHMP4A-204ENST00000530996 NEURL1O76050 574 aa14.84□□□□□ -0.03
CHMP4A-204ENST00000530996 POU3F2P20265 443 aaPredicted RBP14.84□□□□□ -0.03
CHMP4A-204ENST00000530996 MAOAP21397 527 aa14.84□□□□□ -0.03
CHMP4A-204ENST00000530996 NME2P22392 152 aa14.84□□□□□ -0.03
CHMP4A-204ENST00000530996 SSTR2P30874 369 aa14.84□□□□□ -0.03
CHMP4A-204ENST00000530996 CYB561P49447 251 aa14.84□□□□□ -0.03
CHMP4A-204ENST00000530996 IL2P60568 153 aa14.84□□□□□ -0.03
CHMP4A-204ENST00000530996 CSHL1Q14406 222 aa14.84□□□□□ -0.03
CHMP4A-204ENST00000530996 DUPD1Q68J44 220 aa14.84□□□□□ -0.03
CHMP4A-204ENST00000530996 Q6ZPB1 254 aaPredicted RBP14.84□□□□□ -0.03
CHMP4A-204ENST00000530996 ZNF662Q6ZS27 426 aa14.84□□□□□ -0.03
CHMP4A-204ENST00000530996 RPS19BP1Q86WX3 136 aaKnown RBP14.84□□□□□ -0.03
CHMP4A-204ENST00000530996 CPSF7Q8N684 471 aaKnown RBP14.84□□□□□ -0.03
CHMP4A-204ENST00000530996 NAT8LQ8N9F0 302 aa14.84□□□□□ -0.03
CHMP4A-204ENST00000530996 PLPP5Q8NEB5 264 aa14.84□□□□□ -0.03
CHMP4A-204ENST00000530996 ARMC2Q8NEN0 867 aa14.84□□□□□ -0.03
CHMP4A-204ENST00000530996 ATL1Q8WXF7 558 aa14.84□□□□□ -0.03
CHMP4A-204ENST00000530996 SNF8Q96H20 258 aa14.84□□□□□ -0.03
CHMP4A-204ENST00000530996 SIGLEC10Q96LC7 697 aa14.84□□□□□ -0.03
CHMP4A-204ENST00000530996 SLC17A6Q9P2U8 582 aa14.84□□□□□ -0.03
CHMP4A-204ENST00000530996 PPT2Q9UMR5 302 aa14.84□□□□□ -0.03
CHMP4A-204ENST00000530996 ZNF835Q9Y2P0 537 aa14.84□□□□□ -0.03
CHMP4A-204ENST00000530996 DYRK1BQ9Y463 629 aa14.84□□□□□ -0.03
CHMP4A-204ENST00000530996 TEP1Q99973 2627 aaKnown RBP14.84□□□□□ -0.03
CHMP4A-204ENST00000530996 APCP25054 2843 aa14.84□□□□□ -0.03
CHMP4A-204ENST00000530996 SAGE2PA6NJ88 616 aa14.83□□□□□ -0.04
CHMP4A-204ENST00000530996 A8MUA0 341 aa14.83□□□□□ -0.04
CHMP4A-204ENST00000530996 C19orf84I3L1E1 186 aa14.83□□□□□ -0.04
CHMP4A-204ENST00000530996 CDC40O60508 579 aaKnown RBP eCLIP14.83□□□□□ -0.04
CHMP4A-204ENST00000530996 PRMT3O60678 531 aa14.83□□□□□ -0.04
CHMP4A-204ENST00000530996 NPPBP16860 134 aa14.83□□□□□ -0.04
CHMP4A-204ENST00000530996 ITGA8P53708 1063 aa14.83□□□□□ -0.04
CHMP4A-204ENST00000530996 AP1S2P56377 157 aa14.83□□□□□ -0.04
CHMP4A-204ENST00000530996 RAB8AP61006 207 aa14.83□□□□□ -0.04
CHMP4A-204ENST00000530996 PWP1Q13610 501 aa14.83□□□□□ -0.04
CHMP4A-204ENST00000530996 CATSPEREQ5SY80 951 aa14.83□□□□□ -0.04
CHMP4A-204ENST00000530996 ZNF468Q5VIY5 522 aaPredicted RBP14.83□□□□□ -0.04
CHMP4A-204ENST00000530996 TMPRSS11BQ86T26 416 aa14.83□□□□□ -0.04
CHMP4A-204ENST00000530996 SIAH3Q8IW03 269 aa14.83□□□□□ -0.04
CHMP4A-204ENST00000530996 AFAP1L2Q8N4X5 818 aa14.83□□□□□ -0.04
CHMP4A-204ENST00000530996 ABHD11Q8NFV4 315 aa14.83□□□□□ -0.04
CHMP4A-204ENST00000530996 CA5BP1Q8WTZ4 195 aa14.83□□□□□ -0.04
CHMP4A-204ENST00000530996 SLC5A11Q8WWX8 675 aa14.83□□□□□ -0.04
CHMP4A-204ENST00000530996 TRIM51Q9BSJ1 452 aa14.83□□□□□ -0.04
CHMP4A-204ENST00000530996 TRBV11-1A0A0K0K1C0 115 aa14.82□□□□□ -0.04
CHMP4A-204ENST00000530996 URADA6NGE7 173 aa14.82□□□□□ -0.04
CHMP4A-204ENST00000530996 TTC4O95801 387 aa14.82□□□□□ -0.04
CHMP4A-204ENST00000530996 TPOP07202 933 aa14.82□□□□□ -0.04
CHMP4A-204ENST00000530996 RNH1P13489 461 aaKnown RBP14.82□□□□□ -0.04
CHMP4A-204ENST00000530996 PTGER1P34995 402 aa14.82□□□□□ -0.04
CHMP4A-204ENST00000530996 RFC3P40938 356 aa14.82□□□□□ -0.04
CHMP4A-204ENST00000530996 MEOX1P50221 254 aa14.82□□□□□ -0.04
CHMP4A-204ENST00000530996 TIAL1Q01085 375 aaKnown RBP eCLIP14.82□□□□□ -0.04
CHMP4A-204ENST00000530996 HYAL2Q12891 473 aa14.82□□□□□ -0.04
CHMP4A-204ENST00000530996 RBBP5Q15291 538 aaKnown RBP14.82□□□□□ -0.04
CHMP4A-204ENST00000530996 CDSNQ15517 529 aa14.82□□□□□ -0.04
CHMP4A-204ENST00000530996 BBS9Q3SYG4 887 aa14.82□□□□□ -0.04
CHMP4A-204ENST00000530996 SPANXN3Q5MJ09 141 aa14.82□□□□□ -0.04
CHMP4A-204ENST00000530996 RNASEH2BQ5TBB1 312 aaKnown RBP14.82□□□□□ -0.04
CHMP4A-204ENST00000530996 QSOX2Q6ZRP7 698 aa14.82□□□□□ -0.04
CHMP4A-204ENST00000530996 RASGEF1CQ8N431 466 aa14.82□□□□□ -0.04
CHMP4A-204ENST00000530996 OR56A3Q8NH54 315 aa14.82□□□□□ -0.04
CHMP4A-204ENST00000530996 ELP5Q8TE02 316 aa14.82□□□□□ -0.04
CHMP4A-204ENST00000530996 ADAMTS18Q8TE60 1221 aa14.82□□□□□ -0.04
CHMP4A-204ENST00000530996 NEIL2Q969S2 332 aa14.82□□□□□ -0.04
CHMP4A-204ENST00000530996 SDCCAG3Q96C92 435 aa14.82□□□□□ -0.04
CHMP4A-204ENST00000530996 FBXL8Q96CD0 374 aa14.82□□□□□ -0.04
CHMP4A-204ENST00000530996 CFAP36Q96G28 342 aa14.82□□□□□ -0.04
CHMP4A-204ENST00000530996 PBKQ96KB5 322 aa14.82□□□□□ -0.04
CHMP4A-204ENST00000530996 DEFB126Q9BYW3 111 aa14.82□□□□□ -0.04
CHMP4A-204ENST00000530996 SPNS1Q9H2V7 528 aa14.82□□□□□ -0.04
CHMP4A-204ENST00000530996 COQ3Q9NZJ6 369 aa14.82□□□□□ -0.04
CHMP4A-204ENST00000530996 ZFP69BQ9UJL9 534 aa14.82□□□□□ -0.04
CHMP4A-204ENST00000530996 PPP2R2CQ9Y2T4 447 aa14.82□□□□□ -0.04
CHMP4A-204ENST00000530996 KLF13Q9Y2Y9 288 aaPredicted RBP14.82□□□□□ -0.04
CHMP4A-204ENST00000530996 HEATR5BQ9P2D3 2071 aa14.81□□□□□ -0.04
CHMP4A-204ENST00000530996 DNAJB6O75190 326 aa14.81□□□□□ -0.04
CHMP4A-204ENST00000530996 SAT1P21673 171 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms