RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 Q0VFX4 171 aa17.71■□□□□ 0.43
GMDS-208ENST00000530927 CHIT1Q13231 466 aa17.71■□□□□ 0.43
GMDS-208ENST00000530927 SETDB1Q15047 1291 aa17.71■□□□□ 0.43
GMDS-208ENST00000530927 ADGRD1Q6QNK2 874 aa17.71■□□□□ 0.43
GMDS-208ENST00000530927 TMIGD1Q6UXZ0 262 aa17.71■□□□□ 0.43
GMDS-208ENST00000530927 ASB18Q6ZVZ8 466 aa17.71■□□□□ 0.43
GMDS-208ENST00000530927 TAOK1Q7L7X3 1001 aa17.71■□□□□ 0.43
GMDS-208ENST00000530927 PRICKLE2Q7Z3G6 844 aa17.71■□□□□ 0.43
GMDS-208ENST00000530927 RNF175Q8N4F7 328 aa17.71■□□□□ 0.43
GMDS-208ENST00000530927 TBC1D19Q8N5T2 526 aa17.71■□□□□ 0.43
GMDS-208ENST00000530927 UBLCP1Q8WVY7 318 aaPredicted RBP17.71■□□□□ 0.43
GMDS-208ENST00000530927 CCT6BQ92526 530 aa17.71■□□□□ 0.43
GMDS-208ENST00000530927 PEX11GQ96HA9 241 aa17.71■□□□□ 0.43
GMDS-208ENST00000530927 SCYL1Q96KG9 808 aa17.71■□□□□ 0.43
GMDS-208ENST00000530927 SEMA3GQ9NS98 782 aa17.71■□□□□ 0.43
GMDS-208ENST00000530927 OPTCQ9UBM4 332 aa17.71■□□□□ 0.43
GMDS-208ENST00000530927 TBK1Q9UHD2 729 aa17.71■□□□□ 0.43
GMDS-208ENST00000530927 MKL2Q9ULH7 1088 aa17.71■□□□□ 0.43
GMDS-208ENST00000530927 SLC22A7Q9Y694 548 aa17.71■□□□□ 0.43
GMDS-208ENST00000530927 GOLGA8RI6L899 631 aa17.7■□□□□ 0.42
GMDS-208ENST00000530927 K7EPI3 171 aa17.7■□□□□ 0.42
GMDS-208ENST00000530927 PRPF4O43172 522 aaKnown RBP eCLIP17.7■□□□□ 0.421e-6■□□□□ 8.3
GMDS-208ENST00000530927 KLK8O60259 260 aa17.7■□□□□ 0.42
GMDS-208ENST00000530927 GALR3O60755 368 aaPredicted RBP17.7■□□□□ 0.42
GMDS-208ENST00000530927 H2AFYO75367 372 aaKnown RBP17.7■□□□□ 0.42
GMDS-208ENST00000530927 HEXBP07686 556 aa17.7■□□□□ 0.42
GMDS-208ENST00000530927 ALOX12P18054 663 aa17.7■□□□□ 0.42
GMDS-208ENST00000530927 IRF8Q02556 426 aa17.7■□□□□ 0.42
GMDS-208ENST00000530927 RGS1Q08116 209 aa17.7■□□□□ 0.42
GMDS-208ENST00000530927 TCTN3Q6NUS6 607 aa17.7■□□□□ 0.42
GMDS-208ENST00000530927 RPS27LQ71UM5 84 aaKnown RBP17.7■□□□□ 0.42
GMDS-208ENST00000530927 CCDC91Q7Z6B0 441 aa17.7■□□□□ 0.42
GMDS-208ENST00000530927 PARP9Q8IXQ6 854 aa17.7■□□□□ 0.42
GMDS-208ENST00000530927 TEX9Q8N6V9 391 aa17.7■□□□□ 0.42
GMDS-208ENST00000530927 PHF21BQ96EK2 531 aa17.7■□□□□ 0.42
GMDS-208ENST00000530927 TRIM4Q9C037 500 aa17.7■□□□□ 0.42
GMDS-208ENST00000530927 TGIF2Q9GZN2 237 aa17.7■□□□□ 0.42
GMDS-208ENST00000530927 VN1R1Q9GZP7 353 aa17.7■□□□□ 0.42
GMDS-208ENST00000530927 IGHV3-20A0A0C4DH32 117 aa17.69■□□□□ 0.42
GMDS-208ENST00000530927 SYCE1LA8MT33 242 aa17.69■□□□□ 0.42
GMDS-208ENST00000530927 SH3BGRLO75368 114 aa17.69■□□□□ 0.42
GMDS-208ENST00000530927 CELA2AP08217 269 aa17.69■□□□□ 0.42
GMDS-208ENST00000530927 SBK3P0C264 359 aa17.69■□□□□ 0.42
GMDS-208ENST00000530927 SMIM10L1P0DMW3 83 aa17.69■□□□□ 0.42
GMDS-208ENST00000530927 CNTFP26441 200 aa17.69■□□□□ 0.42
GMDS-208ENST00000530927 SLCO1A2P46721 670 aa17.69■□□□□ 0.42
GMDS-208ENST00000530927 RRADP55042 308 aa17.69■□□□□ 0.42
GMDS-208ENST00000530927 MINDY4Q4G0A6 757 aa17.69■□□□□ 0.42
GMDS-208ENST00000530927 MFSD4BQ5TF39 518 aa17.69■□□□□ 0.42
GMDS-208ENST00000530927 KLC3Q6P597 504 aa17.69■□□□□ 0.42
GMDS-208ENST00000530927 LANCL3Q6ZV70 420 aa17.69■□□□□ 0.42
GMDS-208ENST00000530927 PTGR2Q8N8N7 351 aaPredicted RBP17.69■□□□□ 0.42
GMDS-208ENST00000530927 CLEC1AQ8NC01 280 aa17.69■□□□□ 0.42
GMDS-208ENST00000530927 TRPV3Q8NET8 790 aa17.69■□□□□ 0.42
GMDS-208ENST00000530927 MZB1Q8WU39 189 aa17.69■□□□□ 0.42
GMDS-208ENST00000530927 WDR34Q96EX3 536 aa17.69■□□□□ 0.42
GMDS-208ENST00000530927 PTCD3Q96EY7 689 aaKnown RBP17.69■□□□□ 0.42
GMDS-208ENST00000530927 SMIM10Q96HG1 83 aa17.69■□□□□ 0.42
GMDS-208ENST00000530927 FER1L6-AS2Q96M78 137 aa17.69■□□□□ 0.42
GMDS-208ENST00000530927 IP6K3Q96PC2 410 aa17.69■□□□□ 0.42
GMDS-208ENST00000530927 ZBTB20Q9HC78 741 aaPredicted RBP17.69■□□□□ 0.42
GMDS-208ENST00000530927 ZNF160Q9HCG1 818 aa17.69■□□□□ 0.42
GMDS-208ENST00000530927 MLXIPLQ9NP71 852 aa17.69■□□□□ 0.42
GMDS-208ENST00000530927 C14orf105Q9NVL8 296 aa17.69■□□□□ 0.42
GMDS-208ENST00000530927 SCN2AQ99250 2005 aa17.68■□□□□ 0.42
GMDS-208ENST00000530927 SMIM23A6NLE4 172 aa17.68■□□□□ 0.42
GMDS-208ENST00000530927 CHST10O43529 356 aa17.68■□□□□ 0.42
GMDS-208ENST00000530927 RRP9O43818 475 aaKnown RBP17.68■□□□□ 0.42
GMDS-208ENST00000530927 WFS1O76024 890 aa17.68■□□□□ 0.42
GMDS-208ENST00000530927 SERPINA6P08185 405 aa17.68■□□□□ 0.42
GMDS-208ENST00000530927 COX6A1P12074 109 aa17.68■□□□□ 0.42
GMDS-208ENST00000530927 PLA2G2AP14555 144 aa17.68■□□□□ 0.42
GMDS-208ENST00000530927 ACPPP15309 386 aa17.68■□□□□ 0.42
GMDS-208ENST00000530927 PGDP52209 483 aa17.68■□□□□ 0.42
GMDS-208ENST00000530927 ALDH18A1P54886 795 aaKnown RBP17.68■□□□□ 0.42
GMDS-208ENST00000530927 HERC3Q15034 1050 aa17.68■□□□□ 0.42
GMDS-208ENST00000530927 TUBB8Q3ZCM7 444 aa17.68■□□□□ 0.42
GMDS-208ENST00000530927 ZNF605Q86T29 641 aa17.68■□□□□ 0.42
GMDS-208ENST00000530927 KRT78Q8N1N4 520 aa17.68■□□□□ 0.42
GMDS-208ENST00000530927 GALNT16Q8N428 558 aa17.68■□□□□ 0.42
GMDS-208ENST00000530927 TMEM151AQ8N4L1 468 aa17.68■□□□□ 0.42
GMDS-208ENST00000530927 NSUN5Q96P11 429 aaKnown RBP17.68■□□□□ 0.42
GMDS-208ENST00000530927 CAPS2Q9BXY5 557 aa17.68■□□□□ 0.42
GMDS-208ENST00000530927 EHD1Q9H4M9 534 aa17.68■□□□□ 0.42
GMDS-208ENST00000530927 ARGLU1Q9NWB6 273 aaPredicted RBP17.68■□□□□ 0.42
GMDS-208ENST00000530927 COPG2Q9UBF2 871 aa17.68■□□□□ 0.42
GMDS-208ENST00000530927 PCDHGA9Q9Y5G4 932 aaKnown RBP17.68■□□□□ 0.42
GMDS-208ENST00000530927 A0A1W2PPM1 405 aa17.67■□□□□ 0.42
GMDS-208ENST00000530927 LRIT2A6NDA9 550 aa17.67■□□□□ 0.42
GMDS-208ENST00000530927 SUV39H1O43463 412 aa17.67■□□□□ 0.42
GMDS-208ENST00000530927 SLC28A2O43868 658 aa17.67■□□□□ 0.42
GMDS-208ENST00000530927 CXCR2P25025 360 aa17.67■□□□□ 0.42
GMDS-208ENST00000530927 EEF1DP29692 281 aaKnown RBP17.67■□□□□ 0.42
GMDS-208ENST00000530927 CD97P48960 835 aa17.67■□□□□ 0.42
GMDS-208ENST00000530927 BTN3A2P78410 334 aa17.67■□□□□ 0.42
GMDS-208ENST00000530927 NADK2Q4G0N4 442 aa17.67■□□□□ 0.42
GMDS-208ENST00000530927 TIFABQ6ZNK6 161 aa17.67■□□□□ 0.42
GMDS-208ENST00000530927 ABHD13Q7L211 337 aa17.67■□□□□ 0.42
GMDS-208ENST00000530927 GOLGA7Q7Z5G4 137 aa17.67■□□□□ 0.42
GMDS-208ENST00000530927 CYP4X1Q8N118 509 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms